BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920337
Length=3434
Score E
Sequences producing significant alignments: (Bits) Value
AT1G14460.1 | Symbols: | AAA-type ATPase family protein | chr1... 4471 0.0
AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein | c... 1580 0.0
> AT1G14460.1 | Symbols: | AAA-type ATPase family protein | chr1:4948748-4952927
REVERSE LENGTH=3742
Length=3742
Score = 4471 bits (2421), Expect = 0.0
Identities = 2727/2875 (95%), Gaps = 20/2875 (1%)
Strand=Plus/Plus
Query 579 TGCGAAAGCTAGGAAATTTCCAAGTCATCATCTTCACGCTGCATC--------G-G--CT 627
||||||||||||||| |||||||||||||||||||||| |||||| | | |
Sbjct 675 TGCGAAAGCTAGGAACTTTCCAAGTCATCATCTTCACGTTGCATCAGGTTTAAGTGTAGT 734
Query 628 GAG-G-T--ATCAGATGAAACAGAGGATTTTAGCAACTCTGAGAA--T-CCCACTAAAGT 680
||| | | ||| |||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 735 GAGAGATGAATCTGATGAAACAGAGGATTTTAGCAACTCTGAGAATTTCCCCACTAAAGT 794
Query 681 TTCATCTCCTTTGCTTTCGAAACTAAAGCACAAGAACTGGTCACGCTCTTCGTCTAAGTT 740
|||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||
Sbjct 795 ATCATCTCCTTTGCTTTTGAAACTAAAGCGCAAGAACTGGTCACGTTCTTCTTCTAAGTT 854
Query 741 CTTGAGAGCTACTAGTAAGAGAGAGGATTCTTCCCTTACTTGTAACAGTACACCTGCATT 800
| |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 855 CCTGAGAGGTACTAGTAAGAGAGAGGATTCTTCTCATACTTGTAACAGTACACCTGCATT 914
Query 801 GTCAACTAGCTCATACAATATGTATGGTATCGGTAATCCTAGCACCGTCGGGTCGTGGGA 860
||| ||||||||||| ||||||||||||||| ||||||||||||| || || || |||||
Sbjct 915 GTCGACTAGCTCATATAATATGTATGGTATCCGTAATCCTAGCACTGTTGGATCTTGGGA 974
Query 861 GGATGGTGATGATGAGTTGGATGATGATAACTTGGATTTTAAAGGGAGACAAGGTTGTGG 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 GGATGGTGATGATGAGTTGGATGATGATAACTTGGATTTTAAAGGGAGACAAGGTTGTGG 1034
Query 921 GATTCCTTTTTATTGGACCAAGAGGAATCTGAAGCATAGAGGTGGATGTAGGAGTTGTTG 980
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1035 GATTCCTTTTTATTGGACTAAGAGGAATCTGAAACATAGAGGTGGATGTAGGAGTTGTTG 1094
Query 981 CTCACCTTCGTTTTCGGATACTCTTAGAAGGAAAGGAAGTAGCATTTTATGCGGGAGTCA 1040
||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1095 CTCTCCTTCGTTTTCGGATACTCTTAGGAGGAAAGGAAGTAGCATTTTATGTGGGAGTCA 1154
Query 1041 ATCGGCGTATCGTAGACATAGGCATTCCTCTGGGAGATATAATAAACAGAAGCTTGCTTT 1100
||| | |||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1155 ATCTGTGTATCGTAGACATAGGCATTCCTCTGGGAGGTTTAATAAACAGAAGCTTGCTTT 1214
Query 1101 AAGAAGTGCAAAGGGTGTTTTACCTTTGCTCAAATATGGTGGTGATAGTAGAGGAGGGTC 1160
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 AAGAAGTGCAAAAGGTGTTTTACCTTTGCTCAAATATGGTGGTGATAGTAGAGGAGGGTC 1274
Query 1161 ATCTATAGGAATTGGGTGTAGTGATGATGATCTTTCTACTGATTTCGGAGAGCTTGATTT 1220
||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1275 ATCTATAGGAATTGGGTATAGTGATGATGATCTTTCTACTGATTTTGGAGAGATTGATTT 1334
Query 1221 AGAAGCTCAAAGTAGATTAGATGGGAGGAGATGGTCTACTTGTTGTAAGAGTCAGGATGG 1280
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1335 AGAAGCTCAGAGTAGATTAGATGGGAGGAGATGGTCTAGTTGTTGTAAGAGTCAGGATGG 1394
Query 1281 GGAAAGAGAAGAGGAGGAAGAAGAAGGAAGTACACCCGAAAGTATCCAGAGCTTGAGCCA 1340
||||||||||| |||||||||| |||||||||||| |||||||| ||||||||||||||
Sbjct 1395 AGAAAGAGAAGAAGAGGAAGAAGGAGGAAGTACACCGGAAAGTATTCAGAGCTTGAGCCA 1454
Query 1341 AAAGTACAAGCCAATGTTCTTTGATGAACTGATTGGGCAGAGTATAGTTGTTCAGTCGCT 1400
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1455 AAAGTACAAGCCAATGTTCTTTGATGAACTGATTGGGCAGAGTATAGTTGTTCAATCACT 1514
Query 1401 AATGAGCGCTGTGAAAAAGGGTAGGATTGCTCATGTTTATCTTTTTCAAGGTCCTAGAGG 1460
||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1515 AATGAACGCTGTGAAGAAGGGTAGGGTTGCTCATGTTTATCTTTTCCAAGGTCCTAGAGG 1574
Query 1461 AACTGGGAAGACATCTACCGCGAGAATTCTTTCGGCTGCCCTGAACTGTGATCTGGTCAC 1520
||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||
Sbjct 1575 TACTGGGAAGACATCTACCGCGAGAATTCTTTCGGCCGCCTTGAATTGTGATGTGGTCAC 1634
Query 1521 TGAAGAAATGAAACCTTGTGGGTATTGCAAAGAATGCAGTGATTACATGCTAGGGAAAAG 1580
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1635 TGAAGAAATGAAACCTTGTGGGTACTGCAAAGAATGTAGTGATTACATGCTAGGGAAAAG 1694
Query 1581 TAGGGATTTGCTGGAACTTGATGCTGGTAAGAAGAATGGAGCTGAGAAAGTTAGGTACCT 1640
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1695 TAGGGATTTATTGGAACTTGATGCTGGTAAGAAGAATGGAGCCGAGAAAGTTAGGTACCT 1754
Query 1641 TATGAAAAAACTGTTGACATTAGCTCCACAGATTTCTCCAAGATACAAGGTTTTTGTGAT 1700
| |||||||| |||||||||||||||| |||| ||||| |||||||||||||||||| ||
Sbjct 1755 TTTGAAAAAATTGTTGACATTAGCTCCTCAGAGTTCTCAAAGATACAAGGTTTTTGTTAT 1814
Query 1701 AGATGAGTGTCATTTATTACCATCTAGGACATGGCTATCTTTACTCAAGTTTCTTGAGAA 1760
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1815 AGATGAGTGTCATTTATTACCATCTAGGACTTGGCTATCTTTACTCAAGTTTCTTGAGAA 1874
Query 1761 CCCTCTGCAGAAAGTTGTCTTCATATGTATAACTACTGACCTTGACAATGTTCCTCGGAC 1820
||||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct 1875 CCCTCTGCAGAAATTTGTCTTTGTATGTATCACGACTGACCTTGACAATGTTCCTCGGAC 1934
Query 1821 CATTCAGTCAAGGTGCCAGAAGTACCTCTTCAACAAAGTCAGAGATGGTGACATTGTTGT 1880
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1935 CATTCAGTCAAGGTGCCAGAAGTACATCTTCAACAAAGTCAGAGATGGTGACATTGTTGT 1994
Query 1881 GAGACTAAGGAAAATTGCTTTAGATGAAAATCTGGATGTGGAATCACAGGCTTTGGACCT 1940
|||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct 1995 GAGACTAAGGAAGATTGCTTCAGATGAAAATCTAGATGTGGAATCACAGGCGTTGGACCT 2054
Query 1941 GATTGCTTTGAATGCTGATGGCTCGCTTCGAGATGCTGAAACCATGTTGGAGCAGTTGAG 2000
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2055 GATTGCTTTGAATGCTGATGGCTCGCTTCGAGATGCTGAAACCATGTTAGAGCAGTTGAG 2114
Query 2001 TTTGATGGGAAAACGAATCACCGTTGATCTTGTAAATGAGCTTGTGGGTGTTGTTTCAGA 2060
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2115 TTTGATGGGAAAACGAATCACCGTTGATCTTGTAAATGAGCTTGTTGGTGTTGTTTCAGA 2174
Query 2061 TGATAAATTGCTTGAACTCTTGGAATTAGCGTTGTCTTCTGACACGGCAGAGACCGTTAA 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2175 TGATAAATTGCTTGAACTCTTGGAATTAGCGTTGTCTTCTGACACGGCAGAGACCGTTAA 2234
Query 2121 GAAAGCTAGAGAGTTACTGGACTTAGGAGCTGATCCAGTACTCATGATGTCTCAACTAGC 2180
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 2235 GAAAGCTAGAGAGTTACTGGACTTGGGAGCTGATCCAATACTCATGATGTCTCAACTAGC 2294
Query 2181 CAGTCTTATCATGGATATCATTGCTGGAGCATACAAGGCTTTGGACGAAAAATACAGCGA 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGTCTTATCATGGATATCATTGCTGGAGCATACAAGGCTTTGGACGAAAAATACAGCGA 2354
Query 2241 AGCCTTTCTTGATAGAAGGAACTTGACTGAAGCTGATTTGGAGAGACTAAAGCATGCTCT 2300
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 2355 AGCCTTTCTTGATAGAAGGAACTTGACTGAAGCGGATTTGGAGAGACTAAAGCATGCTTT 2414
Query 2301 GAAACTTCTTTCTGAAGCTGAGAAACAGCTTAGAGTTTCTACTGATCGTTCAACATGGTT 2360
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2415 GAAACTTCTTTCTGAGGCTGAGAAGCAGCTTAGAGTTTCTACTGATCGTTCAACATGGTT 2474
Query 2361 CATAGCTACCTTGCTGCAGCTTGGTTCAGTGCCTTCTCCTGGAACCACACATACTGGTAG 2420
||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 2475 CATAGCTACCTTGCTTCAGCTTGGTTCAATGCCTTCTCCTGGAACCACACATACCGGTAG 2534
Query 2421 CAGTAGAAGGCAAAGCTCTAGAGCAACTGAAGAAAGCATTTCAAGAGAAGTTATTGCTTA 2480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2535 CAGTAGAAGGCAAAGCTCTAGAGCAACTGAAGAAAGCATTTCAAGAGAAGTTATTGCTTA 2594
Query 2481 CAAACAGAGATCAGGTCTTCAATGTAGTAATTCAGCATCCCCAACATCTATGAGAAAAAG 2540
||||||||||||||| ||||||||||||||| |||| |||||||| || || ||||||||
Sbjct 2595 CAAACAGAGATCAGGCCTTCAATGTAGTAATACAGCCTCCCCAACTTCCATAAGAAAAAG 2654
Query 2541 TGGAAACCTCGTTCATGAAGTGAAATTGTCCTCCTCATCTAGGGAAGTCTTAGAGAGTGA 2600
|||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct 2655 TGGAAACCTCGTTCGTGAAGTGAAATTGTCCTCCTCTTCTAGCGAAGTTTTAGAGAGTGA 2714
Query 2601 GACTTCCATTGCCTCGCATGACGATACAACGACAAGCTCCATGACCCTTACGTGCAGAAA 2660
|||||||| ||||| ||||||||||||||| ||||| ||||||| ||||| ||||||||
Sbjct 2715 CACTTCCATGGCCTCACATGACGATACAACGGCAAGCACCATGACGCTTACTTGCAGAAA 2774
Query 2661 TTCAGAGAAACTAAATGATATCTGGATAAAGTGTGTGGACAGATGTCATTCGAAGACGTT 2720
||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| ||
Sbjct 2775 TTCAGAGAAACTAAATGATATTTGGATAAAGTGTGTAGATAGATGTCATTCAAAGACATT 2834
Query 2721 GAAGCAGCTTCTATATGCTCATGGGAAGCTTTTATCTATCAGTGAAGTTGAAGGTATCCT 2780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2835 GAAGCAGCTTCTATATGCTCATGGGAAGCTTTTATCTATCAGTGAAGTTGAAGGTATTCT 2894
Query 2781 AGTTGCTTATATTGCATTTGGAGAAAGAGAGATCAAAGCTAGAGCTGAAAGGTTTGTAAG 2840
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 2895 AGTTGCTTATATTGCATTTGGAGAAGGAGAGATCAAAGCGAGAGCTGAAAGGTTTGTAAG 2954
Query 2841 CAGTATCACAAACTCGATTGAAATGGTACTACGGCGAAACGTAGAGGTCAGGATAATCCT 2900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2955 CAGTATCACAAACTCGATTGAAATGGTACTACGGCGAAACGTAGAGGTCAGGATAATCCT 3014
Query 2901 CTTGTCTGAAACTGAATTACTCAACTCCAAGCAGACCAGACAAACAGCAGTGACAACTAG 2960
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3015 CTTGTCTGAAACTGAGTTACTCAACTCCAAGCAGACCAGACAAATAGCAGTGACAACTAG 3074
Query 2961 TTCAGATAATGAAAGTGGGAATGAGATTCCAATGAAAAGAATTGAAGCAATCATCCAAGA 3020
|||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3075 TTCATATACTGAAAGTGGGAATGAGATTCCAATGAAAAGGATTGAAGCAATCATCCAAGA 3134
Query 3021 ACAGAGACTAGAAACTGAGTGGCTACAGAAGATCT-CTGGTTCACAAGGCCGGTTAAAAC 3079
||||||| |||||||||||||| ||||||||| || ||||||||||||||||||||||||
Sbjct 3135 ACAGAGATTAGAAACTGAGTGGTTACAGAAGA-CTCCTGGTTCACAAGGCCGGTTAAAAC 3193
Query 3080 CCGAAAGGAATCAAATTCTACCTCAAGAAGACACCAATGGAGTTAAAGTTTTGAAGATTT 3139
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3194 CCGAAAGGAACCAAATTCTACCTCAAGAAGACACCAATGGAGTTAAAGTCTTGAAGATTT 3253
Query 3140 GTGAAATGGGTGAGTTTAAGGAGAATCAGACTGGTAAAAGAATGGAGCATTGTCCTGTTT 3199
||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||
Sbjct 3254 GTGAAATGGGTGAGTTTCAGGAGAATCAGAGTGGTAAAAGAATGGAACATTGTCCTGTTT 3313
Query 3200 CTCCGAGCTTACTACACAATAGCAACTTCACAAACAACAAAGACAATCTAGGATATGAAT 3259
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3314 CTCCAAGCTTACTACACAATAGTAACTTCACAAACAACAAAGACAATCTAGGATATGAAT 3373
Query 3260 CAGAATCAGGGAGAGGAGTTTGCAGTCTGCTTTTCTGTTGGAACACACAAAAGTCTCCAA 3319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3374 CAGAATCAGGGAGAGGAGTTTGCAGTCTGCTTTTCTGTTGGAACACACAAAAGTCTCCAA 3433
Query 3320 GAAGAACCAAAATCAAAGGGACTTCTGTGCGATCACGAAGAAGTCGAGAGAGACGTTTCT 3379
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3434 GAAGAACCAAAATCAAAGGGACTTCTATGCGATCACGAAGAAGTCGAGAGAGACGTTTCT 3493
Query 3380 CCTTGTTCAGTGGATGTGCTAGGCCACGGAAGTAAGAAAAGTTACTGTGTGATAT 3434
|||||||||||| ||||||||||||| ||||||||||||||||||| || |||||
Sbjct 3494 CCTTGTTCAGTGCATGTGCTAGGCCAAGGAAGTAAGAAAAGTTACTATGAGATAT 3548
Score = 520 bits (281), Expect = 5e-146
Identities = 394/445 (89%), Gaps = 21/445 (5%)
Strand=Plus/Plus
Query 9 GAAGGaaaaaaaaaTGTCGGGTATAAGGATTTCGGATCCGAGCAAATTGCATCTGAAGAA 68
||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 165 GAAAGAAAGAAAAATGTCGGGTTTAAGGATTTCGGATCCGAGCAAATTGCATCTGAAGAA 224
Query 69 GGAGCTTACTCAAATCAGGAAAGTTGCTGCTAAGGGTTTACGCGATCCCGGAACCACTTC 128
|||||||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||
Sbjct 225 GGAGCTTACTCATATCAGGAAAGTTGCTTCTAAAGGTTTACGCGATCCTGGAACCACTTC 284
Query 129 CTCCTGGAAATCTCCTCTTACTTCGTCGAGATCCGTCGCTGAGCCGCCGGTGACGAGCAA 188
||| |||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||
Sbjct 285 CTCATGGAAATCTCCTCTTACTTCCTCGAGATTCGTCGTTGAGCCGCCGG---CGAGCAA 341
Query 189 GAACGTCGAGATTCTCAGTAACAATCAGTTGGATTCTCAGTTTCCAAGTAGTCGAGGATT 248
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||
Sbjct 342 CAACGTCGAGATTCTCAGTAACAATCAGTTAGATTCTCAGTTTCCGAGTAGTCGAGTCTT 401
Query 249 TGGGAA----GG-A-G-A-A-GGAGAAGAAGGTGTTTTTGTACAATTGGAAGACTCAGAA 299
|||||| || | | | | ||||||||||||||||||||| ||||||||||||||||
Sbjct 402 TGGGAATAACGGGAAGGAGAAGGAGAAGAAGGTGTTTTTGTATAATTGGAAGACTCAGAG 461
Query 300 AACTTCGAGCGAGAAGAGTGATGGTGAAGACGGAACGTCTTGGATCCAAGGTAGTCTCAA 359
|||||| |||||||||| ||| |||||||| | ||||||||||||||||| |||||||||
Sbjct 462 AACTTCAAGCGAGAAGACTGAGGGTGAAGATGAAACGTCTTGGATCCAAGCTAGTCTCAA 521
Query 360 TGATGATGATGATG-TGA-G-TGACGCGAG-GAA-CG-G---TGGAGGAGATTCGTGTCT 410
|||||||||||| | ||| | ||| | ||| || || | ||| ||||||||||||||
Sbjct 522 TGATGATGATGACGATGATGATGATGTGAGTGACGCGAGGAATGGTGGAGATTCGTGTCT 581
Query 411 TGGGGAAACTCGATCTGCTTCGATG 435
|| ||||||||||||||||||||||
Sbjct 582 TGAGGAAACTCGATCTGCTTCGATG 606
Score = 75.0 bits (40), Expect = 5e-12
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand=Plus/Plus
Query 488 GAAAGAATGGTTTTAGCAAGAAGAAGAGTAAGGAATTGGATTTGA-TATC 536
|||||| |||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 611 GAAAGAGTGGTTTTATCAAGAAGAAGAGTAAGGAATTGGATTTGAGTATC 660
> AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein |
chr2:660743-665635 FORWARD LENGTH=4163
Length=4163
Score = 1580 bits (855), Expect = 0.0
Identities = 1580/1915 (83%), Gaps = 110/1915 (6%)
Strand=Plus/Plus
Query 685 TCTCCTTTGCTTTCGAAACTAAAGCACAAGAACTGGTCACGCTCTTCGTCTAAG-TTCTT 743
||||||||||||| ||| || ||||| |||||||||||||| |||||||| ||| || ||
Sbjct 878 TCTCCTTTGCTTTTGAAGCTTAAGCAGAAGAACTGGTCACGTTCTTCGTC-AAGATTGTT 936
Query 744 GAGAGCTACTAGTAAG-AGAGAGGATTCTTCCCT-TACTTGTAACAGTACACCTGCATTG 801
|||||||| || | || | ||||||||||| | | ||||| ||| |||||||| || ||
Sbjct 937 GAGAGCTAATAAT-AGAAAAGAGGATTCTT-CATGTACTTATAATAGTACACCGGCTTTA 994
Query 802 TCAACTAGCTCATACAATATGTATG--GTATCGGTAATCCTAGCACCGTCGGGTCGTGGG 859
|| ||||| || ||||||||||||| || || ||||||| ||||| || || || ||||
Sbjct 995 TCCACTAGTTCGTACAATATGTATGCTGT-TC-GTAATCCCAGCACTGTTGGATCTTGGG 1052
Query 860 A--G------GA--T-GGTG-ATGA---TGA-GTTG-GAT-GATGATAACTTGGATTTTA 901
| | || | |||| |||| ||| | || | | |||||||||||||| ||||
Sbjct 1053 ATGGTACCACGACTTCGGTGAATGATGGTGATGATGAGTTGGATGATAACTTGGA-TTTA 1111
Query 902 -AAGGGAGACAAGGTTGTGGGATTCCTTTTTATTGGACCAAG-AGGAATCTGAAGCATAG 959
|||||| ||||| ||||| ||||| | ||||||||| ||| ||| |||| |||||
Sbjct 1112 CCAGGGAGGCAAGGATGTGGTATTCCGTGTTATTGGACGAAGAAGG-CGATGAAACATAG 1170
Query 960 AGGTGGATGTAGGAGTTGTTGCTCACCTTCGTTTTCGGATACTCTT-AGAAGGAA-AGGA 1017
||| ||||| || ||||||||||| || ||||||||||||||| || |||| ||| |||
Sbjct 1171 AGGCGGATGCAGAAGTTGTTGCTCTCCATCGTTTTCGGATACT-TTGAGAA-GAACCGGA 1228
Query 1018 AGTAGCATTTTATGCGGGAGTCAATCGGCGTATCGTAGAC---ATAGGCATTCCTCTGGG 1074
||||||||||| || ||||||||||| | ||||||||||| |||| ||||| ||| ||
Sbjct 1229 AGTAGCATTTTGTGTGGGAGTCAATCTGTGTATCGTAGACATAATAGACATTCTTCT-GG 1287
Query 1075 A-GATATAATAAACAGAAGCTTGCTT-TAAGAAGTGCA-AAGGGTGTTTTACCTTTGCTC 1131
| | |||| |||||| || |||||| | ||||||||| || |||||||||||||| |||
Sbjct 1288 AGGGTATAGTAAACAAAAAATTGCTTGT-AGAAGTGCACAA-GGTGTTTTACCTTTACTC 1345
Query 1132 AAATATGGTGGTGATAGTAGAGGAGGGTCATCTATAGGAATTGGG-TGTAGTGATGATGA 1190
| || ||||||||| ||||||||||||| ||| |||||| ||| | ||||||||||||
Sbjct 1346 AGTTACGGTGGTGATGGTAGAGGAGGGTCTTCTTTAGGAACCGGGCT-TAGTGATGATGA 1404
Query 1191 TCTTTCTACTGATT-TCGGAGAGCTTGATTTAGAAGCTCAAAGTAGATTAGATGGGAGGA 1249
|||||||| ||| | ||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 1405 GCTTTCTACCAATTAT-GGAGAGCTTGATTTAGAGGCTCAGAGTAGATTAGACGGGAGGA 1463
Query 1250 GATGGTCTACTTGTTGTAAGAGTCAGGATGG---GGA-----AAGAG-AAGA-GGAG--G 1297
| ||||||||| ||| || |||||| ||||| ||| || | ||| |||| |
Sbjct 1464 GGTGGTCTACTAGTTATAGGAGTCAAGATGGTTTGGAGGCTGTAGCGTTAGATGGAGAAG 1523
Query 1298 AAGAAGAAGGAAGTACACCCGAAAGTATCCAG-AGCTTGAGCCAAAAGTACAAG-CCAAT 1355
||||||||||||||||||| |||| |||| | ||||| |||||||||||| || |||||
Sbjct 1524 AAGAAGAAGGAAGTACACCGGAAACAATCC-GAAGCTTCAGCCAAAAGTAC-AGACCAAT 1581
Query 1356 GTTCTTTGATGAACTGATTGGGCAGAGTATAGTTGTTCAGTCGCTAATGAGCGCTGTGAA 1415
||| ||||| ||| ||||||| || |||||||| ||||| ||| |||||| |||||| |
Sbjct 1582 GTTTTTTGAGGAATTGATTGGACAAAGTATAGTGGTTCAATCGTTAATGAACGCTGT-TA 1640
Query 1416 AAAGG-GTAGGATTGCTCATGTTTATCTTTTTCAAGGTCCTAGAGGAACTGGGAAGACAT 1474
||||| ||||||| |||| |||||||||||| || ||||||||||||||||| || ||||
Sbjct 1641 AAAGGAGTAGGATCGCTCCTGTTTATCTTTTCCAGGGTCCTAGAGGAACTGGTAAAACAT 1700
Query 1475 CTACCGCGAGAATTCTTTCGGCTGCCCTGAACTGTGATCTGGTCACTGAAGAAATGAAAC 1534
| ||||| || ||| |||| || |||||||| | || | ||| ||||||||||||||| |
Sbjct 1701 CAACCGCAAGGATTTTTTCAGCCGCCCTGAA-T-TG-TGTGGCCACTGAAGAAATGAAGC 1757
Query 1535 CTTGTGGGTATTGCAAAGAATGCAGTGATTACATG-CTAGGGAAAAGTAGGGATTTGCT- 1592
|||||||||| || ||||| |||| ||||| |||| || |||||||||| |||||| |
Sbjct 1758 CTTGTGGGTACTGTAAAGAGTGCAATGATTTCATGTCT-GGGAAAAGTAAGGATTT-TTG 1815
Query 1593 GGAACTTGATGCTGGTAAGAAGAATGGAGCTGAGAAAGTTAGGTACCTTATGAAAAAA-C 1651
||||||||||| | ||| ||||| |||||||| || |||||||||||| | |||||| |
Sbjct 1816 GGAACTTGATGGAGCTAATAAGAAGGGAGCTGATAAGGTTAGGTACCTT-TTAAAAAACC 1874
Query 1652 TGTTGAC-ATTAGC-TCCAC-AGATTTCTCCAA-GATACAAGGTTTTTGTGATAGATGAG 1707
| ||| | || | ||||| | ||| || ||| | |||||||||||||||||||| |||
Sbjct 1875 TACCGACGA-TA-CTTCCACGAAATTCCT-CAATG-TACAAGGTTTTTGTGATAGACGAG 1930
Query 1708 TGTCATTTATTACCATCTAGGACATGGCTATCTTTACTCAAGTTTCTTGAGAACCCTCTG 1767
|||||||| | ||||| | ||| ||||| ||||| || ||||||||||| |||||||||
Sbjct 1931 TGTCATTTGCTGCCATCGAAGACGTGGCTGTCTTTTCTTAAGTTTCTTGAAAACCCTCTG 1990
Query 1768 CAGAAAGTTGTCTTCATATGTATAACTACTGACCTTGACAATGTTCCTCGGACCATTCAG 1827
||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||
Sbjct 1991 CAGAAAGTTGTCTTCATATTTATAACTACTGACCTTGAAAATGTTCCCCGGACCATTCAG 2050
Query 1828 TCAAGGTGCCAGAAGTACCTCTTCAACAAAGTCAGAGATGGTGACATTGTTGTGAGACTA 1887
|||||||||||||||| ||||| ||||| ||| |||| |||||| || |||||||||
Sbjct 2051 TCAAGGTGCCAGAAGTTTCTCTTTGACAAACTCAAAGATTCTGACATAGTAGTGAGACTA 2110
Query 1888 AGGAAAATTGCTTTAGATGAAAATCTGGATGTGGAATCACAGGCTTTGGACCTGATTGCT 1947
| ||||||||||| ||| |||||||| ||||| || | || || |||||||||||||||
Sbjct 2111 AAGAAAATTGCTTCAGACGAAAATCTTGATGTAGACTTGCATGCGTTGGACCTGATTGCT 2170
Query 1948 TTGAATGCTGATGGCTCGCTTCGAGATGCTGAAACCATGTTGGAGCAGTTGAGTTTGATG 2007
|||| || |||||||| ||||||||||||||||| |||||||||||| |||||||| ||
Sbjct 2171 ATGAACGCGGATGGCTCACTTCGAGATGCTGAAACTATGTTGGAGCAGCTGAGTTTGCTG 2230
Query 2008 GGAAAACGAATCACCGTTGATCTT-GTAAATGAGCTTGTGGGTGTTGTTTCAGATGATAA 2066
|||||||| |||||| | | || ||||| ||||| || ||||||||||||||||| ||
Sbjct 2231 GGAAAACGCATCACCACAGCT-TTAGTAAACGAGCTAGTTGGTGTTGTTTCAGATGAAAA 2289
Query 2067 ATTGCTTG-AACTCTTGGAATTAGCGTTGTCTTCTGACACGGCAGAGACCGTTAAGAAAG 2125
|||| ||| |||||||||||||||| |||||||||||||| |||||||| |||||| ||
Sbjct 2290 ATTG-TTGGAACTCTTGGAATTAGCATTGTCTTCTGACACAGCAGAGACTGTTAAGCGAG 2348
Query 2126 CTAGAGAGTTACTGGAC-TTAGGAGCTGATCCAGTACTCATGATGTCTCAACTAGCCAGT 2184
|||||||||| ||||| || |||||||| ||| || || ||||||||||||| ||||||
Sbjct 2349 CTAGAGAGTTGTTGGACCTT-GGAGCTGACCCAATAGTCTTGATGTCTCAACTCGCCAGT 2407
Query 2185 CTTATCATGGATATCATTGCTGG-AGCATACAAGG-CTTTGGACGAAAAATACAGCGAA- 2241
||||| ||||||||||||||||| | ||||||||| | | | | |||||||||||| ||
Sbjct 2408 CTTATTATGGATATCATTGCTGGTA-CATACAAGGTCGTAG-ATGAAAAATACAGC-AAC 2464
Query 2242 GCCTTTCTT-GATAGAAGGAACTTGACTGAAGCTGATTTGGAGAGACTAAAGCATGCTCT 2300
||||| ||| || |||| |||||||||||||| ||| ||||| || ||||||||||| |
Sbjct 2465 GCCTT-CTTTGACGGAAGAAACTTGACTGAAGCAGATATGGAGGGATTAAAGCATGCTTT 2523
Query 2301 GAAACTTCTTTCTGAAGCTGAGAAACAGCTTAGAGTTTCTACTGATCGTTCAACATGGTT 2360
||||||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||||||
Sbjct 2524 GAAACTTCTTTCTGAGGCTGAGAAGCAGCTGAGAGTTTCTAATGACCGTTCAACATGGTT 2583
Query 2361 CATAGCTACCTTGCTGCAGCTTGGTTCAGTGCCTTCTCCTGGAACCACACATACTGGTAG 2420
|| ||| || ||||| |||||||| ||| ||||||||||||| ||||||||||| || ||
Sbjct 2584 CACAGCGACTTTGCTTCAGCTTGGGTCAATGCCTTCTCCTGGCACCACACATACAGGCAG 2643
Query 2421 CAGTAGAAGGCAAAGCTCTAGAGCAACTGAAGA--A---AGCA----TTTCAAGAGAAGT 2471
||||||||||||||||||||||||||||| || | |||| ||||||| |||||
Sbjct 2644 TAGTAGAAGGCAAAGCTCTAGAGCAACTGACGATGACCCAGCAAGCGTTTCAAGGGAAGT 2703
Query 2472 TATTGCTTACAAACAGAGA-TC--AGGTCTTCAATGTAGTAATTCAGCATCCCCA 2523
|| ||||||||||||||| | ||| ||||| | |||||| || ||||| |||
Sbjct 2704 GATGGCTTACAAACAGAGAATAGGAGGACTTCACTTTAGTAAGTCGGCATCTCCA 2758
Score = 327 bits (177), Expect = 3e-88
Identities = 301/360 (84%), Gaps = 12/360 (3%)
Strand=Plus/Plus
Query 2569 TCCTCCTCATCTAGGGAAGTCTTAGAGAGTG-AGACTTCCATTGCCTCGCATGACGATA- 2626
|||||||||||||| || | ||||||| | || |||||||||||| ||||| |||
Sbjct 2840 TCCTCCTCATCTAGCCAAATGATAGAGAGCGAAG-GTTCCATTGCCTCACATGAAAATAG 2898
Query 2627 CAACGACAAGCTCCATGACCCTTACGTGC--AGAAATTCAGAGAAACTAAATGATATCTG 2684
|| || ||||| |||||| |||| | | |||| |||||||||||| || ||||| ||
Sbjct 2899 CATCG-CAAGCACCATGATGCTTA-AT-CAAAGAAGTTCAGAGAAACTTAACGATATATG 2955
Query 2685 GATAAAGTGTGTGGACAGATGTCATTCGAAGACGTTGAAGCAGCTTCTATATGCTCATGG 2744
|| ||| ||| | || |||||||| || ||||| ||| |||||| || ||| |||||||
Sbjct 2956 GAGAAAATGTATTGAAAGATGTCACTCAAAGACACTGAGGCAGCTGCTCTATACTCATGG 3015
Query 2745 GAAGCTTTTATCTATCAGTGAAGTTGAAGGTATCCTAGTTGCTTATATTGCATTTGGAGA 2804
||| ||| ||||||||||||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 3016 GAAACTTATATCTATCAGTGAAGTTGAGGGTATTCTCGTTGCTTATATCGCGTTTGGAGA 3075
Query 2805 AAGA-GAGATCAAAGCT-AGAGCTGAAAGGTTTGTAAGCAGTATCACAAACTCGATTGAA 2862
|| | || |||||| || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3076 AA-ACGATATCAAA-CTGAGAGCTGAAAGGTTTCTAAGCAGTATCACAAACTCGATTGAA 3133
Query 2863 ATGGTACTACGGCGAAACGTAGAGGTCAGGATAATCCTCTTGTCTGAAACTGAATTACTC 2922
||||||||| |||||| |||||||||||||||||| |||||| ||||||| || ||||||
Sbjct 3134 ATGGTACTAAGGCGAAGCGTAGAGGTCAGGATAATTCTCTTGCCTGAAACCGAGTTACTC 3193
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 170918774801
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5