BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg920346

Length=204
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G14520.1 | Symbols: MIOX1 | myo-inositol oxygenase 1 | chr1:...   165    1e-40


> AT1G14520.1 | Symbols: MIOX1 | myo-inositol oxygenase 1 | chr1:4968142-4970311 
REVERSE LENGTH=1427
Length=1427

 Score =  165 bits (89),  Expect = 1e-40
 Identities = 110/120 (92%), Gaps = 2/120 (2%)
 Strand=Plus/Plus

Query  39    CATACGTTC-A-GCTCTTTGCAAATCAGAAGAATACAAGCATTTGATGAACAATGAAGAC  96
             ||| ||||| | ||||||  ||||||||||| ||||||||||||||||||||||||||||
Sbjct  993   CATTCGTTCTACGCTCTTCACAAATCAGAAGCATACAAGCATTTGATGAACAATGAAGAC  1052

Query  97    AGAGAGAACATGAAGTGGCTGAAAGTGTTCAACAAGTGCGATCTCTACAGCAAACGCAAA  156
             |||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||
Sbjct  1053  AGAGAGAACATGAAGTGGCTTAAAGTGTTCAACAAGTATGATCTCTACAGCAAAAGCAAA  1112



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9104544531


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5