BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920538
Length=1551
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16350.1 | Symbols: | Aldolase-type TIM barrel family prote... 2486 0.0
AT1G79470.1 | Symbols: | Aldolase-type TIM barrel family prote... 1240 0.0
> AT1G16350.1 | Symbols: | Aldolase-type TIM barrel family protein
| chr1:5590951-5593007 FORWARD LENGTH=1644
Length=1644
Score = 2486 bits (1346), Expect = 0.0
Identities = 1469/1530 (96%), Gaps = 2/1530 (0%)
Strand=Plus/Plus
Query 23 ATGTCAGGATTCGAAGATGGATTTTCAGCTGAAAAGCTATTCTCACAGGGATACTCATAC 82
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGTCAGGATTCGAAGATGGATTTTCAGCTGAAAAGCTATTCTCACAAGGATACTCATAC 60
Query 83 ACCTACGACGATGTGATCTTTCTACCTCACTACATCGACTTTTCCACGGACGCCGTCTCG 142
||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||
Sbjct 61 ACCTACGACGATGTGATATTTCTACCACACTTCATCGACTTTTCCACTGACGCCGTCTCG 120
Query 143 TTATCCACGCGCCTCAGCAAGCGCGTCCCACTCTCGATCCCATGCGTCGCTTCGCCGATG 202
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTATCCACGCGTCTCAGCAAGCGCGTCCCACTCTCGATCCCATGCGTCGCTTCGCCGATG 180
Query 203 GACACTGTTTCTGAGTCCCACATGGCTGCTGCAATGGCTGCGCTTGGAGGAATCGGAATC 262
|||||||| || || |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 181 GACACTGTCTCGGAATCCCACATGGCTGCTGCAATGGCTGCTCTTGGAGGAATCGGAATC 240
Query 263 GTGCACTATAATTGTGACATCGAGACTCAAGCTTCCGTCATCCGTCACGCCAAATCGCTT 322
||||||||||| || |||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 241 GTGCACTATAACTGCGACATCGATACTCAAGCTTCCGTTATCCGTCACGCTAAATCGCTT 300
Query 323 CAAGTTCCGATTGCGTCTGATGCTGTTTTCAAATGCCCAGAGCATCAGATTGGTTCGGTT 382
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 301 CAAGTTCCGATTGCGTCTGATGCTGTTTTTAAATGCCCAGAGCACCAGATTGGTTCTGTT 360
Query 383 GATGATTTTGGTCCTTCTTCCTTCGTTTTCGTCTCGCAGACAGGAACACTGACACCGAAA 442
||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||
Sbjct 361 GATGATTTTGGTCCTTCTTCCTTCGTTTTTGTCTCGCAGACGGGAACATTGACACCGAAA 420
Query 443 TTGTTGGGTTATGTCTCAAAATCGGAGTGGTCGAGTATGAAAGATGACCAAAAGGAGATG 502
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 421 TTGTTGGGTTATGTTTCAAAATCGGAGTGGTCGAGTATGAAAGATGACCAAAAGGAGGTG 480
Query 503 AAGATATATGATTACATGAGGAGTTGTGAGAGCAAAGATTACTATGTGCCATGGGATATT 562
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 481 AAGATATATGATTACATGAAGAGTTGTGAGAACAAAGATTACTATGTGCCATGGGATATT 540
Query 563 GATCTTGACAAGATCGAGGCGGTTTTGGAAGATAAGCAGAAAGGATTTGTGGTTCTGGAG 622
|||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 541 GATCTTGACAAGATTGAGGCGGTTTTGGAAGATAAGCAGAAAGGGTTTGTTGTTCTGGAG 600
Query 623 AAGGATGGTGAGACCGTGAACGTAGTAACAAAAGACGATGTGGAGAGGGTTAAAGGATAT 682
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AAGGAAGGTGAGACTGTGAACGTAGTAACAAAAGACGATGTGGAGAGGGTTAAAGGATAT 660
Query 683 CCCAAGTCAGGGTCAGGAACTGTTGGTGCAGACAAGAAATGGATGGTGGGTGCGGCTATA 742
||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 661 CCCAAGTTAGGGTCAGGAACTGTTGGTGCAGACAAGAAATGGATGGTTGGTGCTGCTATA 720
Query 743 GGGACAAGGGATTCAGACAAGGAGAGGCTAGAGCATTTAGTGAAAGCTGGAGCTAACGTT 802
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 721 GGGACAAGGGAATCAGACAAGGAGAGGCTAGAGCACTTAGTGAAAGCTGGAGCTAATGTT 780
Query 803 GTGGTGCTGGATAGTTCGCAAGGGAACTCAG-TTTACCAGCTTGAGATGATCAAGTATGT 861
|||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 781 GTGGTGTTGGATAGTTCGCAAGGGAACTC-GATTTACCAGCTTGAGATGATCAAGTATGT 839
Query 862 GAAGAATACGTATCCGGAGTTGGATGTGGTCGGTGGGAATGTGGTGACTATGTACCAGGC 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 GAAGAATACGTATCCGGAGTTGGATGTGGTCGGTGGGAATGTGGTGACTATGTACCAGGC 899
Query 922 AGAGAACTTGATCAAAGCAGGAGTTGATGGGTTGAGAGTTGGTATGGGATCTGGATCGAT 981
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 900 TGAGAACTTGATCAAAGCAGGAGTTGATGGGTTAAGAGTTGGTATGGGATCTGGATCTAT 959
Query 982 ATGCACAACACAAGAGGTTTGTGCCGTTGGACGAGGACAGGCTACTGCCGTGTACAAAGT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 ATGCACAACACAAGAGGTTTGTGCCGTTGGACGAGGACAGGCTACTGCCGTGTACAAAGT 1019
Query 1042 CTCGACGCTAGCTGCTCAGCACGGTGTACCTGTTATCGCAGATGGTGGTATCTCAAACTC 1101
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1020 CTCGACACTAGCTGCTCAGCACGGTGTACCTGTTATCGCAGATGGTGGCATCTCAAACTC 1079
Query 1102 AGGTCACATTGTGAAGGCTCTAGTTCTTGGAGCATCAACTGTGATGATGGGAAGTTTCTT 1161
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1080 AGGTCACATTGTGAAGGCTCTAGTTCTGGGAGCATCAACGGTGATGATGGGAAGCTTCTT 1139
Query 1162 AGCTGGAAGCACCGAGGCTCCGGGAGCTTATGAATATCGAAACGGCAGGAGAGTGAAGAA 1221
|||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1140 GGCTGGAAGCACCGAGGCTCCTGGAGCCTATGAATATCGAAACGGTAGGAGAGTGAAGAA 1199
Query 1222 ATACAGAGGTATGGGTTCTTTAGAAGCAATGACCAAAGGAAGTGACCAGAGATACTTGGG 1281
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1200 ATACAGAGGTATGGGTTCATTAGAAGCAATGACCAAAGGAAGCGACCAGAGATACTTGGG 1259
Query 1282 AGATACCGCGAAACTCAAGATTGCACAAGGAGTCGTTGGAGCGGTTGCGGATAAAGGCTC 1341
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1260 AGATACCGCGAAACTCAAGATTGCACAAGGAGTGGTTGGAGCGGTTGCAGATAAAGGCTC 1319
Query 1342 AGTGTTGAAGTTTATACCTTACACAATGCATGCCGTGAAGCAAGGTTTTCAAGATCTCGG 1401
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AGTGTTGAAGTTTATACCATACACAATGCATGCCGTGAAGCAAGGTTTTCAAGATCTCGG 1379
Query 1402 TGCTTCTTCTTTGCAGTCTGCTCACGAGCTATTGAGAGATAATACCCTTAGACTCGAGGC 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 TGCTTCTTCTTTGCAGTCTGCTCACGAGCTATTGAGAGATAATACCCTTAGACTCGAGGC 1439
Query 1462 TCGTACCGGTGCAGCACAGGTAGAAGGTGGAGTCCATGGACTGGTGTCTTACGAAAAGAA 1521
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1440 TCGTACCGGTGCAGCACAGATAGAAGGTGGAATCCATGGACTGGTGTCTTACGAAAAGAA 1499
Query 1522 ATCGTTTTAGCGTTCCCGAGTTTACTTTCT 1551
||||||||||| ||||| ||||||||||||
Sbjct 1500 ATCGTTTTAGCTTTCCCCAGTTTACTTTCT 1529
> AT1G79470.1 | Symbols: | Aldolase-type TIM barrel family protein
| chr1:29894598-29897166 REVERSE LENGTH=1950
Length=1950
Score = 1240 bits (671), Expect = 0.0
Identities = 1244/1520 (82%), Gaps = 41/1520 (3%)
Strand=Plus/Plus
Query 33 TCGAAGATGGATTTTCAGCTGAAAAGCTATTCTCACAGGGATACTCATACACCTACGACG 92
|||| ||||||||| | || || ||||| ||| | || |||||||| |||||||||||||
Sbjct 275 TCGAGGATGGATTTCCGGCGGATAAGCTCTTCGCTCAAGGATACTCTTACACCTACGACG 334
Query 93 ATGTGATCTTTCTACCTCACTACATCGACTTT-TCCACGGACGCCGTCTCGT-TATCCAC 150
| || |||||||| ||||||| |||||| ||| ||||| ||||| || || | |||||||
Sbjct 335 ACGTCATCTTTCTTCCTCACTTCATCGA-TTTCTCCACAGACGCTGTTTC-TCTATCCAC 392
Query 151 GCGCCTCAGCAAGCGCGTCCCACTCTCGATCCCATGCGTCGCTTCGCCGATGGACACTGT 210
|||||| ||| |||||| || ||||| || || ||||| | || |||||||| |||||
Sbjct 393 GCGCCTTAGCCGGCGCGTGCCTCTCTCCATACCTTGCGTTTCGTCTCCGATGGATACTGT 452
Query 211 TTCTGAGTCCCACATGGCTGCTGCAATGGCTGCGCTTGGAGGAATCGGAATCGTGCACTA 270
||| || || |||||||||||||| |||||| | ||||| || || |||||||| |||||
Sbjct 453 TTCGGAATCTCACATGGCTGCTGCTATGGCTTCTCTTGGTGGGATTGGAATCGTCCACTA 512
Query 271 TAATTGTGACATCG-AGACTCAAGCTTCCG-TCATCCGTCACGCCAAATCGCTTCAAGTT 328
||| |||| ||||| | ||||||| | || | || || || || || |||||| || |
Sbjct 513 TAACTGTGGCATCGCCG-CTCAAGCAT-CGATTATTCGCCAAGCTAAGTCGCTTAAACAT 570
Query 329 CCGATTGCGTCTGATGCTGTTTTCAAATGCCCAGAGCATCAGATTGGTTCGGTT-GATGA 387
|||||||| || || || | | | || | ||| ||| || ||||| ||| || ||||
Sbjct 571 CCGATTGCTTCCGACGCCGGTGTGAAGTTCCCGGAGTATGAGATTACTTC-TTTAGATGC 629
Query 388 TTTTGGTCCTTCTTCCTTCGTTTTCGTCTCGCAGACAGGAACACTGAC-A--CCGAAATT 444
|||||||||||||||||||||||| ||| ||| ||||||||| |||| | || |||||
Sbjct 630 TTTTGGTCCTTCTTCCTTCGTTTTTGTCGAGCAAACAGGAACAATGACGACTCCTAAATT 689
Query 445 GTTGGGTTATGTCTCAAAATCGGAGTGGTCGAGTATGAAAGATGACCAAAAGGAGATGAA 504
||| || ||||| | |||||| ||||| ||| ||||| | || |||| |||||||||
Sbjct 690 GTTAGGCTATGTAACGAAATCGCAGTGGAAGAGAATGAATTACGAACAAAGGGAGATGAA 749
Query 505 GATATATGATTACATGAGGAGTTGTGAGAGCAAAGATTACTATGTGCCATGGGATATTGA 564
|||||| |||||||||| ||| ||||| |||| || || | ||| |||||||| |||||
Sbjct 750 GATATACGATTACATGAAGAGCTGTGATAGCAGTGACTATTGTGTACCATGGGAAATTGA 809
Query 565 TCTTGACAAGATCGAGGCGGTTTTGGAAGATAAGCAGAAA-GGATTTGTGGTTCTGGAGA 623
| |||| ||| | ||| ||||| ||||||||||| ||| || ||||||||||| ||||
Sbjct 810 TTTTGAAAAGTTGGAGTTTGTTTTAGAAGATAAGCA-AAAGGGCTTTGTGGTTCTTGAGA 868
Query 624 AGGATGGTGAGACCGTGAACGTAGTAACAAAAGACGATGTGGAGAGGGTTAAAGGATATC 683
|||||||||||| |||||||| || || ||||| ||| | ||||||||||||||||||
Sbjct 869 GGGATGGTGAGACTGTGAACGTGGTGACGAAAGATGATATACAGAGGGTTAAAGGATATC 928
Query 684 CCAAGTCAGGGTCAGGAACTGTTGGTGCAGACAAG-AAATGGATGGTGGGTGCGGCTATA 742
||||||| || |||| ||||| || ||||| | | |||||||| ||||| || |||
Sbjct 929 CCAAGTCTGGACCAGGGACTGTGGGCCCAGAC-GGTGAGTGGATGGTTGGTGCAGCGATA 987
Query 743 GGGACAAGGGATTCAGACAAGGAGAGGCTAGAGCATTTAGTGAAAGCTGGAGCT-AACGT 801
|| || ||||| || || ||||||||||| |||||||| || || | ||| | | || |
Sbjct 988 GGTACGAGGGAGTCTGATAAGGAGAGGCTTGAGCATTTGGTTAATGTTGG-GGTCAATGC 1046
Query 802 TGTGGTGCTGGATAGTTCGCAAGGGAACTC-AGTTTACCAGCTTGAGATGATCAAGTATG 860
||| ||| |||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 1047 TGTAGTGTTGGATAGTTCGCAAGGGAACTCTA-TTTACCAGCTTGAGATGATCAAGTATG 1105
Query 861 TGAAGAATACGTATCCGGAGTTGGATGTGGTCGGTGGGAATGTGGTGACTATGTACCAGG 920
|||| || || || || || ||||||||| | ||||| ||||| ||||| ||||||||||
Sbjct 1106 TGAAAAAGACTTACCCTGAATTGGATGTGATTGGTGGCAATGTTGTGACAATGTACCAGG 1165
Query 921 CAGAGAACTTGATCAAAGCAGGAGTTGATGGGTTGAGAGTTGGTATGGGATCTGGATCGA 980
|| |||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1166 CACAGAATTTGATCCAAGCAGGAGTTGATGGGTTGAGAGTTGGTATGGGATCTGGTTCGA 1225
Query 981 TATGCACAACACAAGAGGTTTGTGCCGTTGGACGAGGACAGGCTACTGCCGTGTACAAAG 1040
|||| || ||||||||||||||||| ||||| || |||||||||||||| |||||||| |
Sbjct 1226 TATGTACCACACAAGAGGTTTGTGCAGTTGGTCGTGGACAGGCTACTGCTGTGTACAAGG 1285
Query 1041 TCTCGA-CGCTAGCTGCTCAGCA-CGGTG-TACCTGTTATCGCAGATGGTGGTATCTCAA 1097
| | | || | ||||||||| | ||| | | || ||||| || ||||||||||||||||
Sbjct 1286 TTT-GTTCGATCGCTGCTCAG-AGCGG-GATTCCAGTTATAGCGGATGGTGGTATCTCAA 1342
Query 1098 ACTCAGGTCACATTGTGAAGGCTCTAGTTCTTGGAGCATCAACTGTGATGATGGGAAG-T 1156
| ||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || |
Sbjct 1343 ATTCAGGGCACATTGTAAAGGCTCTCGTCCTTGGAGCATCAACTGTTATGATGGGTAGCT 1402
Query 1157 TTCTTAGCTGGAAGCACCGAGGCTCC-GGGAGCTTATGAATAT-CGAAACGGCAGGAG-A 1213
|| ||||||||||| || |||||||| ||| | ||| || ||| |||| ||| | ||| |
Sbjct 1403 TT-TTAGCTGGAAGTACTGAGGCTCCCGGGGG-TTACGAGTATACGAA-CGGTAAGAGGA 1459
Query 1214 GTGAAGAAATACAGAGGTATGGGTTCTTTAGAAGCAATGACCAAAGGAAGTGACCAGAGA 1273
| ||||| ||| | || ||||| || ||||||||||||| |||||||||||||| |||
Sbjct 1460 -TCAAGAAGTACCGTGGAATGGGATCGCTAGAAGCAATGACTAAAGGAAGTGACCAAAGA 1518
Query 1274 TACTTGGGAGAT-ACCGCGAAACTCAAGATTGCACAAGGAGTCGTTGGAGCGGTTGCGGA 1332
||||| |||||| | | |||||||||||||| |||||||| |||||||| || |||||
Sbjct 1519 TACTTAGGAGATCAAA-CAAAACTCAAGATTGCTCAAGGAGTGGTTGGAGCAGTCGCGGA 1577
Query 1333 TAAAGGCTCAGTGTTGAAGTTTATACCTTACACAATGCATGCCGTGAAGCAAGGTTTTCA 1392
||||||||||||||||||| | ||||||||||||||||| |||||||| |||||||| ||
Sbjct 1578 TAAAGGCTCAGTGTTGAAGCTGATACCTTACACAATGCACGCCGTGAAACAAGGTTTCCA 1637
Query 1393 AGATCTCGGTGCTTCTTCTTTGCAGTCTGCTCACGAG-CTATTGAGAG-ATAATACCCTT 1450
||| || ||||||||||| ||||| |||||||| | | || |||||| | || | ||||
Sbjct 1638 AGACCTTGGTGCTTCTTCCTTGCAATCTGCTCATG-GTCTGTTGAGATCA-AACATCCTT 1695
Query 1451 AGACTCGAGGCTCGTACCGGTGCAGCACAGGTAGAAGGTGGAGTCCATGGACTGGTGTCT 1510
|| || |||||||| || ||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct 1696 AGGCTTGAGGCTCGAACTGGTGCTGCACAGGTCGAAGGAGGAGTTCACGGGCTGGTTTCT 1755
Query 1511 TACGAAAAGAAATCGTTTTA 1530
|| |||||||||||||||||
Sbjct 1756 TATGAAAAGAAATCGTTTTA 1775
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76555831125
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5