BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920545
Length=1660
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16410.1 | Symbols: CYP79F1, BUS1, SPS1 | cytochrome p450 79... 2623 0.0
AT1G16400.1 | Symbols: CYP79F2 | cytochrome P450, family 79, su... 2281 0.0
> AT1G16410.1 | Symbols: CYP79F1, BUS1, SPS1 | cytochrome p450
79f1 | chr1:5608807-5611426 FORWARD LENGTH=1980
Length=1980
Score = 2623 bits (1420), Expect = 0.0
Identities = 1578/1655 (95%), Gaps = 7/1655 (0%)
Strand=Plus/Plus
Query 7 CATACATGATGATGATGATGAGCTTTACCACATCATTACCATACCCTTTTCAAATCCTAC 66
||||||| | || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 44 CATACAT-A-CATCATGATGAGCTTTACCACATCATTACCATACCCTTTTCACATCCTAC 101
Query 67 TAGTCTTTATCCTCTCCATGGCATCAATCACTTTACTGGGTCGAATACTCTCAAGACCCA 126
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 102 TAGTCTTTATCCTCTCCATGGCATCAATCACTCTACTGGGTCGAATACTCTCAAGGCCCA 161
Query 127 CCAAAACCAAAGACCAATCTCGCCAGCTTCCGCCTGGCCCACCAGGATGGCCCATCCTCG 186
||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 162 CCAAAACCAAAGACCGATCTTGCCAGCTTCCTCCTGGCCCACCAGGATGGCCCATCCTCG 221
Query 187 GCAATCTACCCGAACTAATCATGACTCGTCCTAGGTCCAAATATTTCCGCCTTGCCATGA 246
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 GCAATCTACCCGAACTATTCATGACTCGTCCTAGGTCCAAATATTTCCGCCTTGCCATGA 281
Query 247 AAGAGCTAAAAACAGATATTGCATGTTTCAATTTTGCCGGAACCCACACCATCACCATAA 306
||||||||||||||||||| ||||||||||| |||||||| | || ||||||||||||
Sbjct 282 AAGAGCTAAAAACAGATATAGCATGTTTCAACTTTGCCGGCATCCGTGCCATCACCATAA 341
Query 307 ACTCCGACGAGATCGCTAGAGAAGCGTTTAGAGAGAGAGACGCCGATTTGGCAGACCGGC 366
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 342 ACTCCGACGAGATCGCTAGAGAAGCGTTTAGAGAGCGAGACGCAGATTTGGCAGACCGGC 401
Query 367 CTCAACTTTTCATCATGGAGACAATCGGAGACAATTACAAATCAATGGGAATCTCGCCGT 426
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 402 CTCAACTTTTCATCATGGAGACAATCGGAGACAATTACAAATCAATGGGAATTTCACCGT 461
Query 427 ACGGTGAACAATTCATGAAGATGAAAAGAGTGATCACAACGGAAATTATGTCCGTTAAAA 486
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 462 ACGGTGAACAATTCATGAAGATGAAAAGAGTGATCACAACGGAAATTATGTCCGTTAAGA 521
Query 487 CGTTGAATATGTTGGAAGCTGCGAGAACCATCGAAGCGGATAATCTCATTGCTTACGTTC 546
||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 522 CGTTGAAAATGTTGGAGGCTGCAAGAACCATCGAAGCGGATAATCTCATAGCTTACGTTC 581
Query 547 ACTCCATGTATCAACGGTCCGAGACGGTCGATGTTAGAGAACTCTCGAGGGTTTATGGTT 606
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 582 ACTCCATGTATCAACGGTCCGAGACGGTCGATGTTAGAGAGCTCTCGAGGGTTTATGGTT 641
Query 607 ACGCAGTGACCATGAGAATGTTGTTTGGAAGGAGACATGTCACGAAAGAAAACGTGTTTT 666
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 642 ACGCAGTGACCATGCGAATGTTGTTTGGAAGGAGACATGTTACGAAAGAAAACGTGTTTT 701
Query 667 CCGATGATGGGAGACTAGGAAAAGCGGAAAAACATCATCTTGAGGTGATTTTCAACACTC 726
| |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 702 CTGATGATGGAAGACTAGGAAACGCCGAAAAACATCATCTTGAGGTGATTTTCAACACTC 761
Query 727 TTAACTGTTTACC-ATCTTTTAGTCCAGCGGATTACGTGGAACGATGGTTGAGAGGTTGG 785
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 TTAACTGTTTACCGA-GTTTTAGTCCAGCGGATTACGTGGAACGATGGTTGAGAGGTTGG 820
Query 786 AATGTTGATGGTCAAGAGAAGAGGGTTACAGTGAATTGTAACATTGTTCGTAGTTACAAC 845
|||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||
Sbjct 821 AATGTTGATGGTCAAGAGAAGAGGGTGACAGAGAACTGTAACATTGTTCGTAGTTACAAC 880
Query 846 AATCCCATAATTGACGAGAGGGTCGAGTTATGGAGGGAAAAAGGTGGTAAGGCTGCTGTT 905
||||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||||
Sbjct 881 AATCCCATAATCGACGAGAGGGTCCAGTTGTGGAGGGAAGAAGGTGGTAAGGCTGCTGTT 940
Query 906 GAAGATTGGCTTGATACGTTCATTACGTTAAAAGATCGAAACGGAAAGTACTTGGTCACG 965
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 941 GAAGATTGGCTTGATACGTTCATTACCCTAAAAGATCAAAACGGAAAGTACTTGGTCACA 1000
Query 966 CCAGACGAAATCAAAGCTCAATGCGTTGAATTTTGTATAGCAGCGATCGATAATCCGGCA 1025
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1001 CCAGACGAAATCAAAGCTCAATGCGTAGAATTTTGTATAGCAGCGATTGATAATCCGGCA 1060
Query 1026 AATAACATGGAGTGGACACTTGCGGAAATGTTAAAGAACCCGGAGATTCTTAGAAATGCT 1085
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 1061 AATAACATGGAGTGGACACTTGGGGAAATGTTAAAGAACCCGGAGATTCTTAGAAAAGCT 1120
Query 1086 CTCAAGGAGTTAGATGAAGTAGTTGGAAAAGACAGGCTTGTGCGAGAATCAGACATACCA 1145
|| |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1121 CTGAAGGAGTTGGATGAAGTAGTTGGAAGAGACAGGCTTGTGCAAGAATCAGACATACCA 1180
Query 1146 AATCTAAACTACTTAAAAGCTTGTTGTAGAGAAACCTTCAGGATTCACCCAAGTGCTCAT 1205
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1181 AATCTAAACTACTTAAAAGCTTGTTGTAGAGAAACATTCAGAATTCACCCAAGTGCTCAT 1240
Query 1206 TATGTCCCTTCCCATCTTGCCCGTCAAGATACCACCCTTGGGGGTTATTTTATTCCCAAA 1265
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1241 TATGTCCCTTCCCATCTTGCGCGTCAAGATACCACCCTTGGGGGTTATTTCATTCCCAAA 1300
Query 1266 GGTAGCCACATTCATGTATCCCGCCCTGGACTAGGCCGGAACCCTAAAATATGGAAAGAT 1325
||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||
Sbjct 1301 GGTAGCCACATTCATGTATGCCGCCCTGGACTAGGTCGTAACCCTAAAATATGGAAAGAT 1360
Query 1326 CCATTGGTATACAAACCCGAGCGTCACCTCCAAGGAGACGGAATCACAAAAGAGGTTACT 1385
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1361 CCATTGGTATACAAACCGGAGCGTCACCTCCAAGGAGACGGAATCACAAAAGAGGTTACT 1420
Query 1386 CTGGTGGAAAAAGAGATGCGTTTTGTCTCGTTTAGCACCGGTCGACGTGGCTGCATCGGT 1445
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1421 CTGGTGGAAACAGAGATGCGTTTTGTCTCGTTTAGCACCGGTCGACGTGGCTGCATCGGT 1480
Query 1446 GTTAAAGTCGGGACGATCATGATGGTTATGATGTTGGCTAGGTTTCTTCAAGGGTTTAAC 1505
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1481 GTTAAAGTCGGGACGATCATGATGGTTATGTTGTTGGCTAGGTTTCTTCAAGGGTTTAAC 1540
Query 1506 TGGAATCTCCATAAAGATTTTGGACCATTAAGCCTCGAGGAAGATAATGCATCATTGCTG 1565
||||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1541 TGGAAACTCCATCAAGATTTTGGACCGTTAAGCCTCGAGGAAGATGATGCATCATTGCTT 1600
Query 1566 ATGGCTAAACCTCTTCTCTTGTCCGTTGAGCCACGCTTGGCACCAAACCTTTATCCAAAA 1625
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1601 ATGGCTAAACCTCTTCACTTGTCCGTTGAGCCACGCTTGGCACCAAACCTTTATCCAAAG 1660
Query 1626 TTCCGCCCTTAAGAAGAAGaaaaaaaCAAGATGGT 1660
||||| ||||||||||||||||| |||||||||
Sbjct 1661 TTCCGTCCTTAAGAAGAAGAAAA---CAAGATGGT 1692
> AT1G16400.1 | Symbols: CYP79F2 | cytochrome P450, family 79,
subfamily F, polypeptide 2 | chr1:5605159-5607473 FORWARD LENGTH=1878
Length=1878
Score = 2281 bits (1235), Expect = 0.0
Identities = 1478/1597 (93%), Gaps = 10/1597 (1%)
Strand=Plus/Plus
Query 54 TTTCAAATCCTACTAGTCTTTATCCTCTCCATGGCATCAATCACTTTACTGGGTCGAATA 113
||||||||| |||||| |||||| ||| ||| ||||||||||||||||| |||||||||
Sbjct 103 TTTCAAATCTTACTAGGATTTATCGTCTTCATCGCATCAATCACTTTACTAGGTCGAATA 162
Query 114 CTCTCAAGACCCACCAAAACCAAAGACCAATCTCGCCAGCTTCCGCCTGGCCCACCAGGA 173
||||||| || ||||||||||||||| | |||||||||||| ||||||| |||||||
Sbjct 163 TTCTCAAGGCCTTCCAAAACCAAAGACCGGTGTCGCCAGCTTCCTCCTGGCCGACCAGGA 222
Query 174 TGGCCCATCCTCGGCAATCTACCCGAACTAATCATGACTCGTCCTAGGTCCAAATATTTC 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGGCCCATCCTCGGCAATCTACCCGAACTAATCATGACTCGTCCTAGGTCCAAATATTTC 282
Query 234 CGCCTTGCCATGAAAGAGCTAAAAACAGATATTGCATGTTTCAATTTTGCCGGAACCCAC 293
| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct 283 CACCTTGCCATGAAAGAGCTAAAAACGGATATCGCATGTTTCAACTTTGCCGGAACCCAC 342
Query 294 ACCATCACCATAAACTCCGACGAGATCGCTAGAGAAGCGTTTAGAGAGAGAGACGCCGAT 353
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||
Sbjct 343 ACCATCACCATAAACTCCGACGAGATCGCTAGAGAAGCTTTTAGAGAGCGAGACGCAGAT 402
Query 354 TTGGCAGACCGGCCTCAACTTTTCATCATGGAGACAATCGGAGACAATTACAAATCAATG 413
|||||||||||||||||||||| |||| | ||| | || ||||||||||||||| |||||
Sbjct 403 TTGGCAGACCGGCCTCAACTTTCCATCGTAGAGTCCATTGGAGACAATTACAAAACAATG 462
Query 414 GGAATCTCGCCGTACGGTGAACAATTCATGAAGATGAAAAGAGTGATCACAACGGAAATT 473
|||| ||| ||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 463 GGAACCTCATCGTACGGTGAACATTTCATGAAGATGAAAAAAGTGATCACAACGGAAATT 522
Query 474 ATGTCCGTTAAAACGTTGAATATGTTGGAAGCTGCGAGAACCATCGAAGCGGATAATCTC 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 523 ATGTCCGTTAAAACGTTGAATATGTTGGAAGCTGCGAGAACCATCGAAGCGGATAATCTC 582
Query 534 ATTGCTTACGTTCACTCCATGTATCAACGGTCCGAGACGGTCGATGTTAGAGAACTCTCG 593
||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 583 ATTGCTTACATTCACTCGATGTATCAACGGTCGGAGACGGTCGACGTTAGAGAACTTTCG 642
Query 594 AGGGTTTATGGTTACGCAGTGACCATGAGAATGTTGTTTGGAAGGAGACATGTCACGAAA 653
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 643 AGAGTTTATGGTTACGCAGTGACCATGAGAATGTTGTTTGGAAGGAGACATGTCACGAAA 702
Query 654 GAAAACGTGTTTTCCGATGATGGGAGACTAGGAAAAGCGGAAAAACATCATCTTGAGGTG 713
|||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 703 GAAAACATGTTTTCGGATGATGGGAGACTAGGAAAAGCCGAAAAACATCATCTTGAGGTG 762
Query 714 ATTTTCAACACTCTTAACTGTTTACCATCTTTTAGTCCAGCGGATTACGTGGAACGATGG 773
|||||||||||||| |||||||| ||| ||||||||| | |||||||||||| ||||||
Sbjct 763 ATTTTCAACACTCTAAACTGTTTGCCAGGTTTTAGTCCCGTGGATTACGTGGACCGATGG 822
Query 774 TTGAGA-GGTTGGAATGTTGATGGTCAAGAGAAGAGGGTTACAGTGAATTGT-AA-CATT 830
|| || ||||||||| |||||||| ||||| |||| | | ||||||| || || | ||
Sbjct 823 TT-AGGTGGTTGGAATATTGATGGTGAAGAGGAGAGAGCGAAAGTGAAT-GTTAATC-TT 879
Query 831 GTTCGTAGTTACAACAATCCCATAATTGACGAGAGGGTCGAG-TTATGGAGGGAAAAAGG 889
|||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct 880 GTTCGTAGTTACAACAATCCCATAATAGACGAGAGGGTCGAAATT-TGGAGGGAAAAAGG 938
Query 890 TGGTAAGGCTGCTGTTGAAGATTGGCTTGATACGTTCATTACGTTAAAAGATCGAAACGG 949
||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 939 TGGTAAGGCTGCTGTGGAAGATTGGCTTGATACGTTCATTACGCTAAAAGATCAAAACGG 998
Query 950 AAAGTACTTGGTCACGCCAGACGAAATCAAAGCTCAATGCGTTGAATTTTGTATAGCAGC 1009
||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 999 AAACTACTTGGTTACGCCAGACGAAATCAAAGCTCAATGCGTCGAATTTTGTATAGCAGC 1058
Query 1010 GATCGATAATCCGGCAAATAACATGGAGTGGACACTTGCGGAAATGTTAAAGAACCCGGA 1069
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1059 GATCGATAATCCGGCAAATAACATGGAGTGGACACTTGGGGAAATGTTAAAGAACCCGGA 1118
Query 1070 GATTCTTAGAAATGCTCTCAAGGAGTTAGATGAAGTAGTTGGAAAAGACAGGCTTGTGCG 1129
|||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1119 GATTCTTAGAAAAGCTCTGAAGGAGTTGGATGAAGTAGTTGGAAAAGACAGGCTTGTGCA 1178
Query 1130 AGAATCAGACATACCAAATCTAAACTACTTAAAAGCTTGTTGTAGAGAAACCTTCAGGAT 1189
|||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1179 AGAATCAGACATACGAAATCTAAACTACTTAAAAGCTTGTTGCAGAGAAACATTCAGGAT 1238
Query 1190 TCACCCAAGTGCTCATTATGTCCCTTCC-CATCTTGCCCGTCAAGATACCACCCTTGGGG 1248
||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct 1239 TCACCCAAGCGCTCATTATGTCCCA-CCTCATGTTGCCCGTCAAGATACCACCCTTGGGG 1297
Query 1249 GTTATTTTATTCCCAAAGGTAGCCACATTCATGTATCCCGCCCTGGACTAGGCCGGAACC 1308
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1298 GTTATTTTATTCCCAAAGGTAGCCACATTCATGTATGCCGCCCTGGGCTAGGCCGGAACC 1357
Query 1309 CTAAAATATGGAAAGATCCATTGGTATACAAACCCGAGCGTCACCTCCAAGGAGACGGAA 1368
|||||||||||||||||||||| | |||| |||| |||||||||||||||||||||||||
Sbjct 1358 CTAAAATATGGAAAGATCCATTAGCATACGAACCGGAGCGTCACCTCCAAGGAGACGGAA 1417
Query 1369 TCACAAAAGAGGTTACTCTGGTGGAAAAAGAGATGCGTTTTGTCTCGTTTAGCACCGGTC 1428
|||||||||||||||||||||| |||| |||||||||||||||||| |||||||| |||
Sbjct 1418 TCACAAAAGAGGTTACTCTGGTCGAAACAGAGATGCGTTTTGTCTCATTTAGCACTGGTA 1477
Query 1429 GACGTGGCTGCATCGGTGTTAAAGTCGGGACGATCATGATGGTTATGATGTTGGCTAGGT 1488
||||||||||| ||||||| ||||||||||| || ||||||| |||||||||||||||||
Sbjct 1478 GACGTGGCTGCGTCGGTGTCAAAGTCGGGACAATTATGATGGCTATGATGTTGGCTAGGT 1537
Query 1489 TTCTTCAAGGGTTTAACTGGAATCTCCATAAAGATTTTGGACCATTAAGCCTCGAGGAAG 1548
|||||||||| ||||||||||| |||||| |||||| ||||| ||||||||||||||||
Sbjct 1538 TTCTTCAAGGTTTTAACTGGAAACTCCATCGAGATTTCGGACCGTTAAGCCTCGAGGAAG 1597
Query 1549 ATAATGCATCATTGCTGATGGCTAAACCTCTTCTCTTGTCCGTTGAGCCACGCTTGGCAC 1608
|| ||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||
Sbjct 1598 ATGATGCATCATTGCTTATGGCTAAGCCTCTTCTTTTGTCTGTTGAGCCACGCTTGGCAT 1657
Query 1609 CAAACCTTTATCCAAAATTCCGCCCTTAAGAAGAAGa 1645
|||||||||||||||||||||| |||||| || ||||
Sbjct 1658 CAAACCTTTATCCAAAATTCCGTCCTTAAAAACAAGA 1694
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82027690530
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5