BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920561 Length=2341 Score E Sequences producing significant alignments: (Bits) Value AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48... 2542 0.0 AT1G16550.1 | Symbols: | pseudogene, putative cell division cy... 1690 0.0 > AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C | chr3:231651-235214 FORWARD LENGTH=2756 Length=2756 Score = 2542 bits (1376), Expect = 0.0 Identities = 1806/2011 (90%), Gaps = 40/2011 (2%) Strand=Plus/Plus Query 330 GAGGACGCTGTTTACAGCGAGAAGCTGAGT---CCAAGGTTTGATTTGATCAATGACAGT 386 |||||||| ||||| |||||||||||||| || |||||||| |||||||||||||| Sbjct 560 GAGGACGCGGTTTATGGCGAGAAGCTGAGTCCGCCGCGGTTTGATCTGATCAATGACAGT 619 Query 387 CTACGAGATAACTATGCCAAGCTAAACAGTTCCTTGAAGAAACCAATTGGGTCGCCTGTG 446 ||| |||||||||| || ||| | ||||| |||| ||||||||||||||||||||||| | Sbjct 620 CTAAGAGATAACTACGCTAAGTTGAACAGCTCCTCGAAGAAACCAATTGGGTCGCCTGCG 679 Query 447 GAGAAGAATGTGGAAGTTGAGACTGTGGGAAACAAAGGTAGAAGTAAGATGGCTACAATG 506 || |||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||| Sbjct 680 GAAAAGAATGTGGAAGTTGAGACTGTGAGCAACAAAGGTAGAAGCAAGTTGGCTACAATG 739 Query 507 GGGTCGAGAAAGGAGTCTAAAGGCTCTCTTTCCGTCAGTGGAACTACTGGTAATGGTGAA 566 ||| | ||||||||| |||||| ||||||||| |||||||| |||||||||||||||| Sbjct 740 GGGGCCAGAAAGGAGGCTAAAGTTTCTCTTTCCCTCAGTGGAGCTACTGGTAATGGTGAT 799 Query 567 TTGGAAG-TGAAGGGTGA-TAAAGGACCTACTTTTAAAGATTTTGGTGGGATTAGGAAAG 624 ||||||| || ||||| | ||||||||||||||||||||| ||||||||||||| |||| Sbjct 800 TTGGAAGTTG-AGGGT-ACTAAAGGACCTACTTTTAAAGACTTTGGTGGGATTAAGAAAA 857 Query 625 TGTTGGATGAATTGGAGAGGAATGTTTTGTTCCCGATTCTCAATCCTGAACCGTTTAAGA 684 | |||||||||||||||| ||||||| | ||||| |||||||||||||| |||||||||| Sbjct 858 TATTGGATGAATTGGAGATGAATGTTCTATTCCCCATTCTCAATCCTGAGCCGTTTAAGA 917 Query 685 AGATCGGAGTTAAGCCACCAAGCGGGATTCTATTCCATGGACCACCTGGCTGTGGAAAGA 744 |||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct 918 AGATTGGAGTGAAGCCACCAAGTGGGATTCTATTTCATGGACCACCTGGCTGTGGGAAGA 977 Query 745 CCAAGTTGGCTAATGCTATAGCCAATGAAGTTGGTGTTCCGTTTTATAAGATTTCAGCTA 804 | |||||||| ||||| || |||||||||| ||||||||||||||||||||||||||| | Sbjct 978 CTAAGTTGGCCAATGCCATTGCCAATGAAGCTGGTGTTCCGTTTTATAAGATTTCAGCCA 1037 Query 805 CAGATGTGGTTTCTGGTGTCTCTGGTGCTTCTGAAGAGAATATTAGAGAGCT-TTTCTCT 863 |||| ||| |||||||||| ||||||||||||||||||||||| |||||||| ||| ||| Sbjct 1038 CAGAGGTGATTTCTGGTGTTTCTGGTGCTTCTGAAGAGAATATCAGAGAGCTCTTT-TCT 1096 Query 864 AAAGCGTATAGGACTGCGCCTTCCATTGTGTTTATCGATGAGATTGATGCGATTGGATCA 923 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1097 AAAGCATATAGGACTGCGCCTTCGATTGTGTTTATCGATGAGATTGATGCGATTGGTTCA 1156 Query 924 AAGAGGGAAAATCAGCAAAGGGAGATGGAGAAGCGGATTGTAACGCAATTATTGACTTGT 983 ||||| || ||||||||||| ||||||||||||||||| ||||| ||||| ||||||||| Sbjct 1157 AAGAGAGAGAATCAGCAAAGAGAGATGGAGAAGCGGATAGTAACACAATTGTTGACTTGT 1216 Query 984 ATGGATGGACCTAGTAACAAA---G--------G-TCCTGAGTCTAGTGCTGGATTTGTT 1031 |||||||||||| |||||||| | | |||||| ||||||||||| |||||| Sbjct 1217 ATGGATGGACCTGGTAACAAAGGCGATAAAAATGCTCCTGATTCTAGTGCTGGTTTTGTT 1276 Query 1032 CTCGTCATTGGAGCTACAAATAGGCCTGATGCTCTGGATCCTGCTTTGAGAAGAAGTGGA 1091 || |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 1277 CTTGTCATTGGAGCTACAAATAGGCCTGATGCTCTTGATCCTGCTTTGAGGAGAAGTGGA 1336 Query 1092 CGATTTGAGTGTGAGATCGCTCTGAGTGTTCCAGATGAAGATGCAAGGGCTGAGATCCTC 1151 |||||||| |||||||||||| | || |||||||||||| |||||||||||||| ||| Sbjct 1337 CGATTTGAAACTGAGATCGCTCTAACTGCTCCAGATGAAGACGCAAGGGCTGAGATACTC 1396 Query 1152 TCTGTTGTAGCCCAAAAACTTAGACTAGAAGGGCCCTTTGACAAGAAAAGAATAGCTCGT 1211 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 1397 TCTGTTGTAGCCCAAAAACTTAGATTAGAAGGACCCTTTGACAAGAAAAGAATAGCTCGT 1456 Query 1212 TTAACACCGGGGTTTGTTGGAGCCGATTTGGAGGGTGTTGCTAACATGGCTGGCAGGATA 1271 ||||||||||| ||||||||||| ||||||||| |||||||| || |||||||||||| | Sbjct 1457 TTAACACCGGGTTTTGTTGGAGCTGATTTGGAGAGTGTTGCTTACTTGGCTGGCAGGAAA 1516 Query 1272 GCCACAAAGAGGATCTTGGATTTAAGAAAATCTCAACTGTCTGAGAACGGTGAAGATGAT 1331 |||| ||||| |||||||||| ||| |||||| ||| ||||| | |||||||||| ||| Sbjct 1517 GCCATTAAGAGAATCTTGGATTCAAGGAAATCTGAACAGTCTGGGGACGGTGAAGACGAT 1576 Query 1332 GATAATTCTTGGCTGAGGCAT-CCCTGGCCAGAAGAAGAGTTGGAAAAACTCTTTGTCAA 1390 | || |||||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct 1577 -A-AA-TCTTGGCTGAGG-ATGCCCTGGCCAGAAGAAGAGTTGGAAAAGCTCTTTGTCAA 1632 Query 1391 GATGTCTGATTTTGAGGAAGCAGTGAATCTAGTTCAAGCATCTTTGACAAGAGAAGGATT 1450 ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1633 AATGTCTGATTTCGAGGAAGCAGTGAATCTAGTTCAGGCATCTTTAACAAGAGAAGGATT 1692 Query 1451 CTCTATCGTGCCTGATGTCAAGTGGGATGATGTTGGTGGACTTGAGCATCTACGACTTGA 1510 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1693 CTCTATCGTGCCTGATGTCAAGTGGGATGATGTTGGTGGACTTGACCATCTACGACTTCA 1752 Query 1511 ATTCAACCGTTATATAGTCAGACCTATCAAAAAGCCTGATATTTATAAGGCTTTTGGGGT 1570 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1753 ATTCAACCGTTATATAGTGAGGCCTATCAAAAAGCCTGATATTTATAAGGCTTTTGGGGT 1812 Query 1571 AGACTTAGAGACAGGATTTTTACTCTATGGACCACCTGGTTGTGGCAAGACATTGATTGC 1630 ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1813 AGACTTAGAGACAGGGTTTTTGCTCTATGGACCACCGGGTTGTGGCAAGACATTGATTGC 1872 Query 1631 AAAGGCGGTTGCCAACGAGGCAGGAGCTAATTTCATGCACATAAAGGGTGCAGAACTTCT 1690 |||||| | ||| |||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct 1873 AAAGGCAGCTGCTAACGAGGCTGGAGCTAATTTCATGCACATCAAGGGTGCCGAACTTCT 1932 Query 1691 AAACAAATACGTTGGAGAGAGCGAGCTTGCTATTCGGACATTGTTTCAGCGGGCCCGGAC 1750 ||| |||||||||||||| || |||||||||||||| || ||||||||||| || ||||| Sbjct 1933 AAATAAATACGTTGGAGAAAGTGAGCTTGCTATTCGTACGTTGTTTCAGCGAGCTCGGAC 1992 Query 1751 ATGCT-CGCCATGTGTAATCTTCTTTGACGAGGTGGATGCTTTGACAACAAGCCGTGGCA 1809 ||| | | |||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 1993 ATG-TGCACCATGTGTAATCTTCTTTGATGAGGTGGATGCTTTGACAACAAGTCGTGGCA 2051 Query 1810 AAGAAGGTGCCTGGGTTGTTGAGCGGCTTTTAAACCAGTTTCTTGTTGAGCTGGATGGTG 1869 |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 2052 AAGAAGGTGCTTGGGTTGTTGAACGGCTTTTGAACCAGTTTCTTGTTGAGCTGGATGGTG 2111 Query 1870 GAGAGAGGCGTAATGTATATGTAATTGGAGCTACAAACAGGCCAGATGTAATTGATCCTG 1929 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2112 GAGAGAGGCGTAATGTATATGTAATTGGAGCTACAAACAGGCCAGATGTAGTTGATCCTG 2171 Query 1930 CGTTCTTGAGACCCGGTAGGTTTGGGAATCTTCTATACGTACCCCTCCCTAACGCGGATG 1989 | ||||||||||| ||||| |||||||||||||| || ||||||||||| ||||| |||| Sbjct 2172 CTTTCTTGAGACCGGGTAGATTTGGGAATCTTCTTTATGTACCCCTCCCCAACGCAGATG 2231 Query 1990 AACGTGCTTCAATTTTAAAAGCTATCGCAAGGAAGAAGCCCATAGATCCTAGTGTTGATC 2049 | |||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||| Sbjct 2232 AGCGTGCTTCAATTCTAAAAGCTATTGCAAGGAAGAAACCGATAGATCCTAGTGTTGATC 2291 Query 2050 TGGATGGCATTGCAAAGA-TGAAATGTGAAGGTTTCAGCGGAGCTGATCTTGCTCACTTG 2108 ||||||| |||||||||| | || |||||||||||||||||||||||||| || |||||| Sbjct 2292 TGGATGGAATTGCAAAGAAT-AACTGTGAAGGTTTCAGCGGAGCTGATCTCGCACACTTG 2350 Query 2109 GTGCAAAAAGCTACATTCCAGGCAGTGGAGGAGATAACAAGTTCCGGTGAAGAT-GA-TG 2166 |||||||||||||||||||| |||||||||||||| | | | ||| |||| | | | || Sbjct 2351 GTGCAAAAAGCTACATTCCAAGCAGTGGAGGAGATGATAGGCTCCAGTGA-G-TCGTCTG 2408 Query 2167 ATGATGATATTACAGATACAA-GTCAGTGTACGATTAAGATGACTCATTTCGAGCAAGCC 2225 | |||||| ||||||||| || | |||||||| || |||| || ||||||||||||||| Sbjct 2409 AAGATGATGTTACAGATATAACG-CAGTGTACAATCAAGACGAGGCATTTCGAGCAAGCC 2467 Query 2226 TTGTCCTTAGTCTCACCTTCTGTGAACAAACAGCAAAGAAGACACTACCAGGAACTATCG 2285 ||||||||||||||||| ||||||||||||||||||||||||||||| | | |||||| Sbjct 2468 TTGTCCTTAGTCTCACCATCTGTGAACAAACAGCAAAGAAGACACTATGACGCACTATCA 2527 Query 2286 GTAA-GACTCCAAGAAAGCAGT-GGAAGGAA 2314 || | || ||||||||| || || ||||| Sbjct 2528 ACAAAG-CTTCAAGAAAGC-GTTGGGAGGAA 2556 > AT1G16550.1 | Symbols: | pseudogene, putative cell division cycle protein, blastp match of 53% identity and 2.4e-136 P-value to GP|6069665|dbj|BAA85441.1||AP000616 EST D15969(C1695) corresponds to a region of the predicted gene.~similar to valosin-containing protein (U20213) {Oryza sativa (japonica cultivar-group)} | chr1:5665907-5668209 FORWARD LENGTH=2303 Length=2303 Score = 1690 bits (915), Expect = 0.0 Identities = 1063/1132 (94%), Gaps = 20/1132 (2%) Strand=Plus/Plus Query 281 AAGGAAGAAAGTGTCTTCTTCTCCGTCTTATTCTTCGACTTCTGAGGACGAGGACGCTGT 340 |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||| Sbjct 1 AAGGAAGAAAGTGTCTTCGTCGCCGTCTCATTCTTCGACTTCTGAGGACGAGGACGCTGT 60 Query 341 TTACAGCGAGAAGCTGAGTCCAAGGTTTGATTTGATCAATGACAGTCTACGAGATAACTA 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTACAGCGAGAAGCTGAGTCCAAGGTTTGATTTGATCAATGACAGTCTACGAGATAACTA 120 Query 401 TGCCAAGCTAAACAGTTCCTTGAAGAAACCAATTGGGT---CGCCTGTGGAGAAGAATGT 457 ||||||||| || | | |||||||||||||||| ||||||||||||||||||| Sbjct 121 TGCCAAGCT-AA-A----C---AAGAAACCAATTGGGTCGCCGCCTGTGGAGAAGAATGT 171 Query 458 GGAAGTTGAGACTGTGGGAAACAAAGGTAGAAGTAAGATGGCTACAATGGGGTCGAGAAA 517 |||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 172 TGAAGTTGAAACTGTGGGTAACAAAGGTAGAAGTAAGATGGCTACAATGGGGTTGAGAAA 231 Query 518 GGAGTCTAAAGGCTCTCTTTCCGTCAGTGGAACTACTGGTAATGGTGAATTGGAAGTGA- 576 ||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||| || | Sbjct 232 GGAGTCTAAAGACTCACTTTCCATCAGTGGAACTACTGGTAATGGTGATTTGGATGT-AG 290 Query 577 AGGGTGATAAAGGACCTACTTTTAAAGATTTTGGTGGGATTAGGAAAGTGTTGGATGAAT 636 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 291 TGGGTGATAAAGGACCTACTTTTAAAGATTTTGGTGGGATTAAGAAAGTGTTGGATGAAC 350 Query 637 TGGAGAGGAATGTTTTGTTCCCGATTCTCAATCCTGAACCGTTTAAGAAGATCGGAGTTA 696 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 351 TGGAGAGGAATGTTTTGTTCCCGATTCTCAATCCTGAACCGTTTAAGAAGATTGGAGTTA 410 Query 697 AGCCACCAAGCGGGATTCTATTCCATGGACCACCTGGCTGTGGAAAGACCAAGTTGGCTA 756 ||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 411 AGCCACCGAGTGGGATTCTATTTCATGGACCACCTGGCTGTGGGAAGACCAAGTTGGCTA 470 Query 757 ATGCTATAGCCAATGAAGTTGGTGTTCCGTTTTATAAGATTTCAGCTACAGATGTGGTTT 816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 471 ATGCTATAGCCAATGAAGTTGGTGTTCCGTTTTATAAGATTTCAGCTACAGATGTGGTTT 530 Query 817 CTGGTGTCTCTGGTGCTTCTGAAGAGAATATTAGAGAGCTTTTCTCTAAAGCGTATAGGA 876 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 531 CTGGTGTCTCTGGTGCTTCTGAAGAGAATCTTAGAGAGCTTTTCTCTAAAGCGTATAGGA 590 Query 877 CTGCGCCTTCCATTGTGTTTATCGATGAGATTGATGCGATTGGATCAAAGAGGGAAAATC 936 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 591 CTGCACCTTCCATTGTGTTTATCGATGAGATTGATGCGATTGGATCAAAGAGGGAAAATC 650 Query 937 AGCAAAGGGAGATGGAGAAGCGGATTGTAACGCAATTATTGACTTGTATGGATGGACCTA 996 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 651 AGCAAAGGGAGATGGAAAAGCGGATTGTAACGCAATTATTGACTTGTATGGATGGACCTG 710 Query 997 GTAACAAAGGTCCTGAGTCTAGTGCTGGATTTGTTCTCGTCATTGGAGCTACAAATAGGC 1056 ||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| ||| Sbjct 711 GTAACAATGGTCCTGAGTCTAGTGTTGGATTTGTTCTCGTTATTGGAGCTACAAAT-GGC 769 Query 1057 CTGATGCTCTGGATCCTGCTTTGAGAAGAAGTGGACGATTTGAGTGTGAGATCGCTCTGA 1116 |||||| ||| |||||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct 770 CTGATGTTCTTGATCCTGCTTTGAGGAGAAGTGGACGATTTGAATGTGAGATTGCTCT-A 828 Query 1117 G-TGTTCCAGATGAAGATGCAAGGGCTGAGATCCTCTCTGTTGTAGCCCAAAAACTTAGA 1175 | ||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct 829 GGTGTTCCAGATGAAGATGCAAGAGCTGAGATACTTTCTGTTGTAGCCCAAAAACTTAGA 888 Query 1176 CTAGAAGGGCCCTTTGACAAGAAAAGAATAGCTCGTTTAACACCGGGGTTTGTTGGAGCC 1235 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 889 CTAGAAGGGCCCTTTGACAAGAAAAGAATAGCTCGTTTAACGCCGGGTTTTGTTGGAGCA 948 Query 1236 GATTTGGAGGGTGTTGCTAACATGGCTGGCAGGATAGCCACAAAGAGGATCTTGGATTTA 1295 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| | Sbjct 949 GATTTGGAGGGTGTTGCTAACATGGCTGGCAGGATTGCCACAAAGAGAATCTTGGATTCA 1008 Query 1296 AGAAAATCTCAACTGTCTGAGAACGGTGAAGATGATGATAATTCTTGGCTGAGGCATCCC 1355 ||||||||||||||| ||| | || |||||||||| | ||||||||||||||||||| Sbjct 1009 AGAAAATCTCAACTGGCTGGGGACTCTGAAGATGAT-AG--TTCTTGGCTGAGGCATCCC 1065 Query 1356 TGGCCAGAAGAAGAGTTGGAAAAACTCTTTGTCAAGATGTCTGATTTTGAGG 1407 |||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1066 TGGCCAGAAGAAGAGTTGGAAAAACTCTTTGTTAAGATGTCTGATTTCGAGG 1117 Score = 1158 bits (627), Expect = 0.0 Identities = 723/769 (94%), Gaps = 8/769 (1%) Strand=Plus/Plus Query 1558 AGGCTTTTGGGGTAGACTTAGAGACAGGATTTTTACTCTATGGACCACCTGGTTGTGGCA 1617 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 1464 AGGCTTTTGGGGTAGACTTAGAGGTTGGATTTTTACTCTATGGACCACCGGGTTGTGGCA 1523 Query 1618 AGACATTGATTGCAAAGGCGGTTGCCAACGAGGCAGGAGCTAATTTCATGCACATAAAGG 1677 ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 1524 AGACATTGATTGCAAAGGCAGTTGCTAACGAGGCAGGAGCTAATTTCATGCACATCAAGG 1583 Query 1678 GTGCAGAACTTCTAAACAAATACGTTGGAGAGAGCGAGCTTGCTATTCGGACATTGTTTC 1737 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1584 GTGCAGAGCTTCTAAACAAGTACGTTGGAGAGAGCGAGCTTGCTATTCGGACATTGTTTC 1643 Query 1738 AGCGGGCCCGGACATGCTCGCCATGTGTAATCTTCTTTGACGAGGTGGATGCTTTGACAA 1797 |||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1644 AGCGTGCCCGGACATGTTCGCCATGTGTGATCTTCTTTGATGAGGTGGATGCTTTGACAA 1703 Query 1798 CAAGCCGTGGCAAAGAAGGTGCCTGGGTTGTTGAGCGGCTTTTAAACCAGTTTCTTGTTG 1857 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 1704 CAAGCCGTGGCAAAGAAGGTGCCTGGGTTGTTGAACGGCTTTTAAACCAGTTCCTTGTTG 1763 Query 1858 AGCTGGATGGTGGAGAGAGGCGTAATGTATATGTAATTGGAGCTACAAACAGGCCAGATG 1917 |||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1764 AGCTAGACGGTGGAGAGAGGCGTAATGTATACGTAATTGGAGCTACAAACAGGCCAGATG 1823 Query 1918 TAATTGATCCTGCGTTCTTGAGACCCGGTAGGTTTGGGAATCTTCTATACGTACCCCTCC 1977 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 1824 TAATTGATCCTGCGTTCTTGAGACCTGGTAGGTTTGGGAATCTTCTATATGTACCCCTCC 1883 Query 1978 CTAACGCGGATGAACGTGCTTCAATTTTAAAAGCTATCGCAAGGAAGAAGCCCATAGATC 2037 ||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 1884 CTAACGCCGATGAACGTGCTTCAATTCTAAAAGCTATTGCAAGGAAGAAGCCCATAGATC 1943 Query 2038 CTAGTGTTGATCTGGATGGCATTGCAAAGATGAAATGTGAAGGTTTCAGCGGAGCTGATC 2097 ||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1944 CTAGTGTTGATCTTGATAGCATTGCAAAGATGAATTGTGAAGGTTTCAGCGGAGCTGATC 2003 Query 2098 TTGCTCACTTGGTGCAAAAAGCTACATTCCAGGCAGTGGAGGAGAT-A--ACAAGTTCCG 2154 | |||||||||||||||||||||||||||||||||||||||||||| | |||| ||| Sbjct 2004 TCGCTCACTTGGTGCAAAAAGCTACATTCCAGGCAGTGGAGGAGATCACCACAATTTCAT 2063 Query 2155 GTGAAGATGATGATGATGATATTACAGATACAAGTCAGTGTACGATTAAGATGACTCATT 2214 ||||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||| Sbjct 2064 GTGAAGATGATGACGAT-AT-T-ACAGATACAAGTCAGTGTACGATTAAGATGACTCATT 2120 Query 2215 TCGAGCAAGCCTTGTCCTTAGTCTCACCTTCTGTGAACAAACAGCAAAGAAGACACTACC 2274 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2121 TCGAGCAAGCATTGTCCTTAGTCTCACCTTCTGTGAACAAACAGCAAAGAAGACACTATG 2180 Query 2275 AGGAACTATCGGTAA-GACTCCAAGAAAGCAGTGGAAGGAAACCATAGG 2322 |||||||||| || | ||||||||||||| ||||||||||||||||| Sbjct 2181 AGGAACTATCAAAAAAG-CTCCAAGAAAGCATTGGAAGGAAACCATAGG 2228 Score = 261 bits (141), Expect = 2e-68 Identities = 151/156 (97%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 1405 AGGAAGCAGTGAATCTAGTTCAAGCATCTTTGACAAGAGAAGGATTCTCTATCGTGCCTG 1464 |||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct 1221 AGGAAGCAGTGAATCTAGTTCAGGCATCTTTAACAAGGGAAGGATTCTCTATCGTGCCTG 1280 Query 1465 ATGTCAAGTGGGATGATGTTGGTGGACTTGAGCATCTACGACTTGAATTCAACCGTTATA 1524 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1281 ATGTCAAGTGGGATGATGTTGGTGGACTTGAGCATCTACGACTTGAATTCAACCGCTATA 1340 Query 1525 TAGTCAGACCTATCAAAAAGCCTGATATTTATAAGG 1560 ||||||||||||||||||||||||||||||| |||| Sbjct 1341 TAGTCAGACCTATCAAAAAGCCTGATATTTACAAGG 1376 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 116214261675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5