BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920607
Length=1119
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17020.1 | Symbols: SRG1, ATSRG1 | senescence-related gene 1... 1796 0.0
AT1G17010.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 920 0.0
AT4G25300.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 917 0.0
AT4G25310.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 833 0.0
> AT1G17020.1 | Symbols: SRG1, ATSRG1 | senescence-related gene
1 | chr1:5820206-5822013 FORWARD LENGTH=1401
Length=1401
Score = 1796 bits (972), Expect = 0.0
Identities = 1072/1121 (96%), Gaps = 4/1121 (0%)
Strand=Plus/Plus
Query 1 CGTCCAAGAAAGAAGCCGACATGGAAACAAAAGGGGCAGCACAGTGGAGCTCTATCCTAG 60
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 33 CGTCCAGGAAAGAAGCCGACATGGAAGCAAAAGGGGCAGCACAGTGGAGCTCTATCCTAG 92
Query 61 TTCCTTCTGTTCAAGAGATGGTTAAGGAGAAGACGATCACGACCGTTCCTCCCAGGTATG 120
|||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 93 TTCCATCCGTTCAAGAGATGGTTAAGGAGAAGACGATCACGACCGTTCCTCCTAGGTACG 152
Query 121 TCCGGTCTGATCAAGACAAAACTAAAGTCGATGATGATTTTGATGTGAAAACCGAGATCC 180
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 153 TCCGGTCTGATCAAGACAAAACTGAAGTCGATGATGATTTTGATGTGAAAATTGAGATCC 212
Query 181 CAATCATCGATCTGAAGCGTCTGTGTTCTTCAACCACCATGGATTCCGAGGTTGAGAAAC 240
||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 213 CAATCATCGATATGAAGCGTTTGTGTTCTTCAACCACCATGGATTCTGAGGTTGAGAAAC 272
Query 241 TCGACTTCGCTTGCAAAGAGTGGGGATTTTTCCAGCTTGTAAACCATGGAACAGAAC-CA 299
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 273 TCGACTTCGCTTGCAAAGAGTGGGGATTTTTCCAGCTTGTAAACCATGGAATAG-ACTCA 331
Query 300 AGTTTCTTGGACAAAGTAAAGTCAGAGATTCAAGATTTCTTCAACCTTCCCATGGAAGAA 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 332 AGTTTCTTGGACAAAGTAAAGTCAGAGATTCAAGATTTCTTCAACCTTCCCATGGAAGAA 391
Query 360 AAGAAGAAGTTCTGGCAGCGACCAGATGAGATTGAAGGTTTCGGACAAGCTTTTGTGGTT 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 392 AAGAAGAAGTTCTGGCAGCGACCAGATGAGATAGAAGGTTTCGGACAAGCTTTTGTGGTT 451
Query 420 TCAGAAGATCAGAAACTAGATTGGGCAGACTTGTTTTTCCATACAGTGCAAC-ATGTTCA 478
||||||||||||||||||||||||||||||||||| |||||||| ||||||| | ||| |
Sbjct 452 TCAGAAGATCAGAAACTAGATTGGGCAGACTTGTTCTTCCATACCGTGCAACCA-GTTGA 510
Query 479 ATTACGCAAGCCTCACTTGTTCCCCAAGCTACCTCTTTCCTTTAGAGATACATTGGAGAC 538
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 511 ATTACGCAAGCCTCACTTGTTCCCCAAGCTACCTCTTCCCTTTAGAGATACACTGGAGAT 570
Query 539 GTATTCTGCTGAAGTGCAGAGCGTAGCTAAGATCTTAATAGCGAAAATGGCAAGCGCCCT 598
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 571 GTATTCTTCTGAAGTGCAGAGCGTAGCTAAGATCTTAATAGCGAAAATGGCAAGAGCCCT 630
Query 599 AGAGACCAAACCAGAGGAACTGGAAAAGTTGTTTGATGATGTTGATTCGATTCAAAGTAT 658
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 631 AGAGATCAAACCAGAGGAACTGGAAAAGTTGTTTGATGATGTTGATTCGGTTCAAAGTAT 690
Query 659 GAGGATGAATTACTACCCACCATGTCCACAACCAGATCAAGTTATCGGTCTAACCCCGCA 718
|||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 691 GAGGATGAATTACTACCCACCATGCCCACAACCAGATCAGGTTATTGGTCTAACCCCGCA 750
Query 719 TTCTGATTCGGTCGGACTCACCGTACTGATGCAGGTGAATGAAGTTGAAGGTCTCCAAAT 778
||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct 751 TTCTGATTCGGTCGGACTCACTGTACTGATGCAAGTGAATGACGTTGAAGGTCTCCAAAT 810
Query 779 CAAGAAAGATGGGAAATGGGTTCCTGTTAAACCTATCCCAAATGCTTTCATCGTCAATAT 838
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 811 CAAGAAAGATGGGAAATGGGTTCCTGTTAAACCCCTCCCAAATGCTTTCATTGTCAATAT 870
Query 839 TGGAGACGTCTTAGAGATCATAACTAATGGGACATACAGAAGTATAGAGCATCGTGGAGT 898
||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct 871 TGGAGACGTCTTAGAGATCATAACTAATGGGACATACCGAAGCATAGAGCATCGCGGAGT 930
Query 899 TGTGAATTCAGAGAAAGAGAGGCTCTCTATTGCAACGTTTCACAATGTGGGAATGTATAA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 931 TGTGAATTCAGAGAAAGAGAGGCTCTCTATTGCAACGTTTCACAATGTGGGAATGTATAA 990
Query 959 GGAAGTTGGTCCCGCAAAAAGCCTCGTTGAAAGACAAAAGGTTGCAAGATTCAAAAGGCT 1018
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 991 AGAAGTTGGTCCTGCAAAAAGCCTAGTTGAAAGACAAAAGGTTGCAAGATTCAAAAGGCT 1050
Query 1019 GACCATGAAAGAGTATAGCGATGGTTTGTTCTCTCGTACGCTCGACGGGAAAGCTTATCT 1078
||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1051 GACCATGAAAGAGTATAACGATGGTTTGTTCTCTCGTACTCTCGACGGAAAAGCTTATCT 1110
Query 1079 CGATGCTTTGAGAATCTAAAGAAAGCAATGCCTTGTGGCCC 1119
||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1111 AGATGCTTTGAGAATCTAAAGAGAGCAATGCCTTGTCGCCC 1151
> AT1G17010.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr1:5817567-5819352
FORWARD LENGTH=1355
Length=1355
Score = 920 bits (498), Expect = 0.0
Identities = 918/1116 (82%), Gaps = 47/1116 (4%)
Strand=Plus/Plus
Query 3 TCCAA-GA-AAG-AAGCCGACATGGAAACAAAAGGGGCAGCACAGTGGAGCTCTATCCTA 59
||||| || ||| ||||| ||||||| | |||| | | | | |||||||||||| ||
Sbjct 80 TCCAAGGAGAAGAAAGCCCCCATGGAAGCCAAAGAAGAAACCCCGTGGAGCTCTATTTTA 139
Query 60 GTTCCTTCTGTTCAAGAGATGGTTAAGGAGAAGACGATCACGACCGTTCCTCCCAGGTAT 119
|||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||| |||
Sbjct 140 GTTCCTTCTGTTCAGGAGATGGTGAAGGATAAGATGATCACGACCGTTCCTCCCAGATAT 199
Query 120 GTCCGGTCTGATCAAGACAAAACTAAAGTCGAT-G---ATGATTTTGATGTGAAAACCGA 175
|| |||| |||||||||||||||| |||||| | | |||||| || | | | ||||
Sbjct 200 GTTCGGTATGATCAAGACAAAACTGAAGTCG-TCGTCCATGATTCTGGCCTCATATCCGA 258
Query 176 GATCCCAATCATCGATC-TGAAGC-GTCTGTGTTCTTCAACCACCATGGATTCCGAGGTT 233
|||||| |||||||| | |||| | || |||||||||| ||| || |||| || ||||||
Sbjct 259 GATCCCCATCATCGA-CATGAATCGGT-TGTGTTCTTCTACCGCCGTGGACTCTGAGGTT 316
Query 234 GAGAAACTCGACTTCGCTTGCAAAGAGTGGGGATTTTTCCAGCTTGTAAACCATGGAACA 293
|||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| |
Sbjct 317 GAGAAACTCGACTTTGCTTGCAAAGAATATGGATTTTTCCAGCTTGTAAACCATGGAATA 376
Query 294 GAACCAAGTTTCTTGGACAAAGTAAAGTCAGAGATTCAAGATTTCTTCAACCTTCCCATG 353
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 377 GACCCAAGTTTCTTGGACAAAATAAAGTCAGAGATTCAAGATTTCTTCAACCTTCCCATG 436
Query 354 GAAGAAAAGAAGAAGTTCTGGCAG-CGACCAGATGAGATTGAAGG-TTTCGGACAAGCTT 411
|||||||| |||||||| |||||| | ||||| | ||| ||||| ||| ||||||||||
Sbjct 437 GAAGAAAAAAAGAAGTTGTGGCAGAC-ACCAGCGGTGATGGAAGGGTTT-GGACAAGCTT 494
Query 412 TTGTGGTTTCAGAAGATCAGAAACTAGATTGGGCAGACTTGTTTTTCCATACAGTGCAAC 471
||||||||||||||||||||||||| || |||||||| || || |||| || | ||||||
Sbjct 495 TTGTGGTTTCAGAAGATCAGAAACTCGACTGGGCAGATTTATTCTTCCTTATAATGCAAC 554
Query 472 ATGTTCAATTACGCAAGCCTCACTTGTTCCCCAAGCTACCTCTTTCCTTTAGAGATACAT 531
||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |
Sbjct 555 CTGTTCAATTACGCAAGCGTCACTTGTTCCCCAAGCTACCTCTTCCCTTTAGGGATACGT 614
Query 532 TGGAGACGTATTCTGCT-GAAGTGCAGAGCGTAGCTAAGATCTTAATAGCGAAAATGGC- 589
| || | |||||| || || || |||| |||||||||||||| |||||||||||||
Sbjct 615 TAGATATGTATTCCACTCGA-GTAAAGAGTATAGCTAAGATCTTACTAGCGAAAATGGCG 673
Query 590 AAGCGCCCTAG-AGACCAAACCAGAGGAACTGGAA-AAGTTGTTTGATGATGTTGATTCG 647
|| ||| | | ||| ||| |||||||| | ||| || | |||| ||||| | || |
Sbjct 674 AAA-GCCTT-GCAGATCAAGCCAGAGGAGGTAGAAGAAATA-TTTGGTGATGAT-AT--G 727
Query 648 ATTCAAAGTATGAGGATGAATTACTA-CCCACCATGTCCACAACC-AGATCAAGTTATCG 705
|| || |||||||||||||| ||||| ||| || ||||||||||| | ||| |||| ||
Sbjct 728 ATGCAGAGTATGAGGATGAACTACTATCCC-CCGTGTCCACAACCTA-ATCTGGTTA-CG 784
Query 706 G-TCTAACCCCGCATTCTGATTCGGTCGGACTCACCGTACTGATGCAGGTGAATGAAGTT 764
| ||||| |||||||| ||| | ||||| |||||| |||| |||||||||||||||||
Sbjct 785 GGTCTAATTCCGCATTCCGATGCAGTCGGGCTCACCATACTTTTGCAGGTGAATGAAGTT 844
Query 765 GAAGGTCTCCAAATCAAGAAAGATGGGAAATGGGTTCCTGTTAAACCTATCCCAAATGCT 824
|| |||||||||||||||||| |||| || ||| || ||| |||||| ||| |||||||
Sbjct 845 GACGGTCTCCAAATCAAGAAAAATGGCAAGTGGTTTTTTGTCAAACCTCTCCAAAATGCT 904
Query 825 TTCATCGTCAATATTGGAGACGTCTTAGAGATCATAACTAATGGGACATACAGAAGTATA 884
||||| |||||| |||| ||||| |||||||||||||| || ||||||||| |||| ||
Sbjct 905 TTCATTGTCAATGTTGGGGACGTGTTAGAGATCATAACGAACGGGACATACCGAAGCATC 964
Query 885 GAGCATCGTGG-AGTTGTGAA-TTCAGAGAAAGAGAGGCTCTCTATTGCAACGTTTCACA 942
||||| || || | | ||||| || ||||||||||||||||| ||||| || |||||||
Sbjct 965 GAGCACCG-GGCAATGGTGAACTTG-GAGAAAGAGAGGCTCTCCATTGCGACATTTCACA 1022
Query 943 ATGTGGGAATGTATAAGGAAGTTGGTCCCGCAAAAAGCCTCGTTGAAAGACAAAAGGTTG 1002
| ||||||| |||| ||| ||||||| || | |||||| ||| |||||||| ||| ||
Sbjct 1023 ACACGGGAATGGATAAAGAAATTGGTCCGGCGAGAAGCCTTGTTCAAAGACAAGAGGCTG 1082
Query 1003 CAA-GATTCAAAAGGCTGACCA-TGAAAGAGTA-TAGCGATGGTTTGTTCTCTCGT-ACG 1058
||| | || | ||| |||| | | ||||| || | | |||| ||||| || ||| |
Sbjct 1083 CAAAGTTT-AGAAGCCTGAAAACT-AAAGACTACTTGA-ATGGCTTGTTTTCCCGTGAA- 1138
Query 1059 CTCGACGGGAAAG-CTTATCTCGATGCTTTGAGAAT 1093
||| | || |||| ||||||| |||||| |||||||
Sbjct 1139 CTCAAAGG-AAAGGCTTATCTTGATGCTATGAGAAT 1173
> AT4G25300.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr4:12945173-12946778
FORWARD LENGTH=1297
Length=1297
Score = 917 bits (496), Expect = 0.0
Identities = 922/1123 (82%), Gaps = 48/1123 (4%)
Strand=Plus/Plus
Query 6 AAGAAAGAAGCCGACATGGAA-ACAAAAGGGGCAGCACAGTGGAGCTCTATCCTAGTTCC 64
||| ||||||| | ||||||| | ||||| ||| || ||||||||||| |||||||
Sbjct 77 AAG-AAGAAGCGGCCATGGAAGTC-AAAGGAGCA--AC-CCGGAGCTCTATCATAGTTCC 131
Query 65 TTCTGTTCAAGAGATGGTTAAGGAGAAGACGATCACGACCGTTCCTCCCAGGTATGTCCG 124
|||||||||||||||||| |||||||||| ||||||||| |||||||| |||||||| ||
Sbjct 132 TTCTGTTCAAGAGATGGTGAAGGAGAAGATGATCACGACGGTTCCTCCGAGGTATGTACG 191
Query 125 GTCTGATCAAGACAAAACTAAAG-TCGATGATGATTTTGATGTGA-AAACCGAGATCCCA 182
||||||||||||| | || || | | | ||||| || | | | ||||| ||||||||
Sbjct 192 GTCTGATCAAGACGTAGCT-GAGATAGCCGTTGATTCTGGTCTAAGAAACC-AGATCCCA 249
Query 183 ATCATCGATC-TGAAG-CGTCTGTGTTCTTCAACCACCATGGATTCCGAGGTTGAGAAAC 240
||||| || | || || | |||||||||||||||| |||||||||| ||| |||| || |
Sbjct 250 ATCATAGA-CATG-AGTCTTCTGTGTTCTTCAACCTCCATGGATTCTGAGATTGACAAGC 307
Query 241 TCGACTTC-GCTTGCAAAGAGTGGGGATTTTTCCAGCTTGTAAACCATGGAACAGAACCA 299
| ||| || ||||||||||||||||||||||| ||||||||||||||||||| || ||
Sbjct 308 TTGAC-TCTGCTTGCAAAGAGTGGGGATTTTTTCAGCTTGTAAACCATGGAATGGAGTCA 366
Query 300 AGTTTCTTGGACAAAGTAAAGTCAGAGATTCAAGATTTCTTCAACCTTCCCATGGAAGAA 359
||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 367 AGTTTCTTGAACAAAGTAAAGTCAGAGGTTCAAGACTTCTTCAACCTTCCCATGGAAGAG 426
Query 360 AAGAAGAAGTTCTGGCAGCGACCAGATGAGATTGAA-GGTTTCGGACAAGCT-TTTGTGG 417
|||||||| || ||||| | ||| |||||||| ||| ||||| ||||||| | |||||||
Sbjct 427 AAGAAGAATTTGTGGCAACAACCCGATGAGATCGAAGGGTTT-GGACAAG-TATTTGTGG 484
Query 418 TTTCAGAAGATCAGAAACTAGATTGGGCAGACT-TGTTTTTCCATACAGTGCAACATGTT 476
|||||||||| |||||||| ||||||||||| | |||| |||| |||| |||||| ||||
Sbjct 485 TTTCAGAAGAGCAGAAACTCGATTGGGCAGA-TATGTTCTTCCTTACAATGCAACCTGTT 543
Query 477 CAATTACGCAAGCCTCACTTGTTCCCCAAGCTACCTCTTTCCTTTAGAGATACATTGGAG 536
| |||||||||||||||||||||||||||| ||||||| |||||||||||||| | ||
Sbjct 544 CGATTACGCAAGCCTCACTTGTTCCCCAAGTTACCTCTGCCCTTTAGAGATACACTAGAC 603
Query 537 ACGTATTCTGCTGAAGTGCAGAGCGTAGCTAAGATCTTAATAGCGAAAATGGCAAG-CGC 595
| |||||| ||||||||| | ||| | |||||||||||| | | |||||| || | ||
Sbjct 604 ATGTATTCGGCTGAAGTGAAAAGCATTGCTAAGATCTTACTTGGGAAAATAGC-GGTAGC 662
Query 596 CCTAG-AGACCAAACCAGAGGAACTGGAAAAGTTGTTTGATGATGTTGATTCGATTCAAA 654
|| | ||| |||||| |||||| |||| |||||||||||||||| | || | || |
Sbjct 663 TCT-GAAGATCAAACCCGAGGAAATGGATAAGTTGTTTGATGATG-AG-TTAG-GGCAGA 718
Query 655 GTATGAGGATGAATTACTACCCACCATGTCCACAACCAGATCAA-GTTATCGGTCTAACC 713
| || ||| ||||||||||||| | |||||| | || ||| || ||||| ||||||||
Sbjct 719 GAATTAGGCTGAATTACTACCCGCGTTGTCCAGAGCCCGAT-AAGGTTATTGGTCTAACT 777
Query 714 CCGCATTCTGATTCGGT-C-GGACTCACCGTACTGATGCAGG-TGAATGAAGTTGAAGGT 770
|||||||||||||| | | ||||||||| ||||| |||||| | |||||||||||||||
Sbjct 778 CCGCATTCTGATTC--TACAGGACTCACCATACTGTTGCAGGCT-AATGAAGTTGAAGGT 834
Query 771 CTCCAAATCAAGAAAGATGGGAAATGGGTTCCTGTTAAACCTATCCCAAATGCTTTCATC 830
||||||||||||||| ||| || |||||| |||| |||||| ||||||||||||| |
Sbjct 835 CTCCAAATCAAGAAAAATGCCAAGTGGGTTTCTGTCAAACCTCTCCCAAATGCTTTGGTT 894
Query 831 GTCAATATTGGAGACGTCTTAGAGATCATAACTAATGGGACATACAGAAGTATAGAGCAT 890
|||||| | |||||| |||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct 895 GTCAATGTCGGAGACATCTTAGAGATAATAACGAATGGGACATACCGAAGTATAGAGCAT 954
Query 891 CGTGGAGTTGTGAATTCAGAGAAAGAGAGGCTCTCTATTGCAACGTTTCACAATGTGGGA 950
|||||||||||||| |||||||||||||| || || | || | || |||||| | |||
Sbjct 955 CGTGGAGTTGTGAACTCAGAGAAAGAGAGACTTTCGGTGGCGGCATTCCACAATATAGGA 1014
Query 951 ATGTATAAGGAAGTTGGTCCCGCAAAAAGCCTCGTTGAAAGACAAAAGGTTGCAAGATTC 1010
|| ||| ||| ||||||| | ||| ||||| ||||| || |||| |||| |||
Sbjct 1015 TTGGGTAAAGAAATTGGTCCTATGAGAAGTCTCGTGGAAAGGCACAAGGCTGCATTTTTC 1074
Query 1011 AAAAG-GCTGACCA-TGAAAGAGTATAGCGATGGTTTGTTCTCTCGT-ACGCTCGACGGG 1067
||||| | |||| | |||| |||||| | |||| ||||| || ||| | |||||| ||
Sbjct 1075 AAAAGCG-TGACTACTGAA-GAGTATTTCAATGGCTTGTTTTCCCGTGA-GCTCGATGGA 1131
Query 1068 AAAGCTTATCTCGATGCTT-TGAGAATCTAAA-G-AAAGCAAT 1107
|||||||| || |||| || ||||| |||||| | ||| ||||
Sbjct 1132 AAAGCTTACCTTGATG-TTATGAGACTCTAAAAGGAAA-CAAT 1172
> AT4G25310.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr4:12949664-12951234
FORWARD LENGTH=1247
Length=1247
Score = 833 bits (451), Expect = 0.0
Identities = 877/1075 (82%), Gaps = 59/1075 (5%)
Strand=Plus/Plus
Query 58 TAGTTCCTTCTGTTCAAGAGATGGTTAAGGAGAAGACGATCACGACCG---TTCCTCCCA 114
||||||||||||||||||||||||| ||||||||| |||||| || | ||||||| |
Sbjct 124 TAGTTCCTTCTGTTCAAGAGATGGTGAAGGAGAAGGTGATCACAACGGTACTTCCTCCGA 183
Query 115 GGTATGTCCGGTCTGATCAAGACAAAA--CTA--AAGTCGATGATGATTTTGATGTGAAA 170
||||||| |||||||||||||| |||| | | || | || ||||| || ||||||
Sbjct 184 GGTATGTGCGGTCTGATCAAGA-AAAAGGCGAGGCAG-CCAT--TGATTCTG--GTGAAA 237
Query 171 ACCGAGATCCCAATCATCGATC-TGAAG-CGTCTGTGTTCTTCAACCACCATGGATTCCG 228
||| | ||||||||||| || | || || | | ||| |||||||||| |||||||||| |
Sbjct 238 ACC-AAATCCCAATCATAGA-CATG-AGTCTTTTGTCTTCTTCAACCTCCATGGATTCTG 294
Query 229 AGGTTGAGAAACTCGACTTCGCTTGCAAAGAGTGGGGATTTTTCCAGCTTGTAAACCATG 288
|| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 295 AGATTGACAAACTCGACTTTGCTTGCAAAGAATGGGGATTTTTCCAGCTTGTAAACCATG 354
Query 289 GAACAGAACCAAGTTTCTTGGACAAAGTAAAGTCAGAGATTCAAGATTTCTTCAACCTTC 348
||| | | |||||||||| | ||||| || ||||||||||||||||||||||
Sbjct 355 GAA-TG------G--ACTTGGACAAATTCAAGTCCGATATTCAAGATTTCTTCAACCTTC 405
Query 349 CCATGGAAGAAAAGAAGAAGTTCTGGCAGCGACCAGATGAGATTGAA-GGTTTCGGACAA 407
|||||||||| ||||||||| | ||||| | ||| | ||| || ||| ||||| ||||||
Sbjct 406 CCATGGAAGAGAAGAAGAAGCTGTGGCAACAACCCGGTGATATCGAAGGGTTT-GGACAA 464
Query 408 GCTTTTGTGGTTTCAGAAGATCAGAAACTAGATTGGGCAGAC-TTGTTTTTCCATACAGT 466
||||||||| |||||||||| |||||||| |||||||| ||| || || |||| |||| |
Sbjct 465 GCTTTTGTGTTTTCAGAAGAGCAGAAACTCGATTGGGCTGACGTT-TTCTTCCTTACAAT 523
Query 467 GCAACATGTTCAATTACGCAAGCCTCACTTGTTCCCCAAGCTACCTCTTTCCTTTAGAGA 526
||||| ||||| ||||||||| ||||||||||| |||||| |||||||| |||| |||||
Sbjct 524 GCAACCTGTTCCATTACGCAAACCTCACTTGTTTCCCAAGTTACCTCTTCCCTTCAGAGA 583
Query 527 TACATTGGAGACGTATTCTGCTGAAGTGCAGAGCGTAGCTAAGATCTTAATAGCGAAAAT 586
|||| |||| |||||||| |||||| || | ||| |||||||| ||||| | |||||| |
Sbjct 584 TACACTGGATACGTATTCGGCTGAACTGAAAAGCATAGCTAAGGTCTTATTCGCGAAACT 643
Query 587 GGCAAGCGCCCT-AGAGACCAAACCAGAGGAACTGGAAAAGTTGTTTGATGATGTTGATT 645
|| || || || | | | |||||| |||||| ||||||||||||||||||||| | ||
Sbjct 644 AGCGAGTGCACTCA-AAATCAAACCTGAGGAAATGGAAAAGTTGTTTGATGATG-AG-TT 700
Query 646 CGATTCAAAGTATGAGGATGAATTACTACCCACCATGTCCACAACCAGATCAA-GTTATC 704
| ||| || || ||||||||||||||||| || ||||| | || ||| || | |||
Sbjct 701 AG-GTCAGAGAATTAGGATGAATTACTACCCGCCTTGTCCGGAGCCCGAT-AAGGCTATT 758
Query 705 GGTCTAACCCCGCATTCTGATTCGGT-C-GGACTCACCGTACTGATGCAGGTGAATGAAG 762
|||||||| || ||||| || | | | | ||||||||| ||||| ||||||| |||||||
Sbjct 759 GGTCTAACTCCACATTCCGA-T-GCTACAGGACTCACCATACTGTTGCAGGTTAATGAAG 816
Query 763 TTGAAGGTCTCCAAATCAAGAAAGATGGGAAATGGGTTCCTGTTAAACCTATCCCAAATG 822
|||||||||||||||||||||||||||| || |||||| |||| |||||| |||||||||
Sbjct 817 TTGAAGGTCTCCAAATCAAGAAAGATGGCAAGTGGGTTTCTGTCAAACCTCTCCCAAATG 876
Query 823 CTTTCA-TCGTCAATATTGGAGACGTCTTAGAGATCATAACTAATGGGACATACAGAAGT 881
|||| | | |||||| |||||||| |||||||||||||||| |||||||||||| |||||
Sbjct 877 CTTT-AGTTGTCAATGTTGGAGACATCTTAGAGATCATAACGAATGGGACATACCGAAGT 935
Query 882 ATAGAGCATCGTGGAGTTGTGAATTCAGAGAAAGAGAGGCTCTCTATTGCAACGTTTCAC 941
|||||||||||||||||||| || ||||||||||||||||| ||| | || | || ||
Sbjct 936 ATAGAGCATCGTGGAGTTGTAAACTCAGAGAAAGAGAGGCTTTCTGTGGCGTCATTCCAT 995
Query 942 AATGTGGGAAT-G-TATAAGGAAGTTGGTCCCGCAA-A-AAGCCTCGTTGAAAGACAAAA 997
||| ||| | | || ||| || ||||||| | | | ||| ||||| ||||| || ||
Sbjct 996 AATACGGGGTTCGGTA-AAGAAA-TTGGTCC-G-ATGAGAAGTCTCGTGGAAAGGCACAA 1051
Query 998 GGTTGCAAGATTCAAAAGGCTGACCA-TGAAAGAGTATAGCGATGGTTTGTTCTCTCGT- 1055
|| |||| ||||||| ||||||| |||| |||||| | |||| ||||| || |||
Sbjct 1052 GGGTGCACTTTTCAAAACCCTGACCACTGAA-GAGTATTTCCATGGCTTGTTTTCCCGTG 1110
Query 1056 ACGCTCGACGGGAAAGCTTATCTCGATGCTT-TGAGAATCTAAAGAAAGCAATGC 1109
| |||||| || |||||||| || |||| || ||||||||||| |||| || |||
Sbjct 1111 A-GCTCGATGGAAAAGCTTACCTTGATG-TTATGAGAATCTAAGGAAACCA-TGC 1162
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54869195685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5