BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920610
Length=2639
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17050.1 | Symbols: SPS2 | solanesyl diphosphate synthase 2 ... 1539 0.0
AT1G17040.2 | Symbols: SHA | SH2 domain protein A | chr1:582484... 1308 0.0
AT1G78510.1 | Symbols: SPS1 | solanesyl diphosphate synthase 1 ... 848 0.0
AT1G78540.2 | Symbols: SHB | SH2 domain protein B | chr1:295410... 562 6e-159
> AT1G17050.1 | Symbols: SPS2 | solanesyl diphosphate synthase
2 | chr1:5829080-5831343 FORWARD LENGTH=1591
Length=1591
Score = 1539 bits (833), Expect = 0.0
Identities = 897/929 (97%), Gaps = 0/929 (0%)
Strand=Plus/Plus
Query 1711 ATTGTTGGTGCAGAAAATCCGGTTTTGATATCTGCGGCTGAGCAAATCTTCAGTGCTGGT 1770
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 555 ATTGTTGGTGCAGAAAATCCGGTTTTGATATCTGCTGCTGAGCAAATCTTCAGCGCTGGT 614
Query 1771 GGCAAGAGGATGAGACCGGGTTTGGTATTCCTTGTATCACGAGCCACTGCGGAATTAGCT 1830
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 615 GGCAAGAGGATGAGACCGGGTTTGGTATTCCTTGTATCACGAGCCACTGCGGAATTAGCA 674
Query 1831 GGCTTAAAGGAACTTACAGTAGAACATCGGCGTTTAGGTGAGATCATTGAGATGATTCAC 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 675 GGCTTAAAGGAACTTACAGTAGAACATCGGCGTTTAGGTGAGATCATTGAGATGATTCAC 734
Query 1891 ACCGCAAGTTTGATACACGATGATGTGTTAGACGAAAGTGATATGCGAAGAGGAAAAGAA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 735 ACCGCAAGTTTGATACACGATGATGTGTTAGACGAAAGTGATATGCGAAGAGGAAGGGAA 794
Query 1951 ACGGTTCACGAGCTTTTCGGAACAAGAGTAGCTGTATTAGCTGGAGATTTCATGTTTGCT 2010
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 795 ACGGTTCACGAGCTATTCGGAACAAGAGTAGCTGTATTAGCTGGGGATTTCATGTTTGCT 854
Query 2011 CAAGCATCATGGTACTTAGCAAATCTCGAAAACCTCCAAGTCATTAAGCTCATAAGTCAG 2070
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 855 CAAGCATCATGGTACTTAGCAAATCTCGAAAACCTTGAAGTCATTAAGCTCATAAGTCAG 914
Query 2071 GTAATCAAAGATTTTGCAAGCGGTGAGATAAAGCAAGCATCAAGTTTATTCGATTGTGAT 2130
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 915 GTGATCAAAGATTTTGCAAGCGGTGAGATAAAGCAAGCATCGAGTTTATTCGATTGTGAT 974
Query 2131 GTCGAGCTTGATGACTACTTGCTAAAGAGTTACTACAAGACAGCTTCATTAGTAGCTGCA 2190
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 975 GTCAAGCTTGATGACTACATGCTAAAGAGTTACTACAAGACAGCTTCATTAGTAGCTGCA 1034
Query 2191 AGCACCAAAGGAGCTGCAATTTTCAGTAAAGTCGAAAGCGAGGTCGCAGAGCAAATGTAT 2250
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1035 AGCACCAAAGGAGCAGCAATTTTCAGTAAAGTCGAAAGCAAGGTCGCAGAGCAAATGTAT 1094
Query 2251 CAGTTCGGAAAGAATCTCGGTTTATCTTTTCAAGTAGTTGATGACATTCTGGACTTCACT 2310
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 CAGTTCGGGAAGAATCTCGGTTTATCTTTTCAAGTAGTTGATGACATTCTGGACTTCACT 1154
Query 2311 CAATCCACAGAGCAGTTAGGGAAACCTGCAGCTAATGACTTAGCCAAAGGTAACATAACA 2370
|| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct 1155 CAGTCCACAGAGCAGTTAGGTAAGCCTGCAGCTAATGACCTAGCCAAAGGTAACATAACG 1214
Query 2371 GCGCCAGTGATCTTCGCACTAGAGAATGAGCCGAGGCTAAGAGAGATCATTGAGTCTGAG 2430
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1215 GCGCCAGTGATCTTCGCGCTAGAGAATGAGCCAAGGCTAAGAGAGATCATTGAGTCTGAG 1274
Query 2431 TTTTGTGAGCCTGGATCGCTTGAAGAAGCGATTGAAATAGTTAGAAATCGCGGTGGGATC 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1275 TTTTGTGAGCCTGGATCGCTTGAAGAAGCGATTGAAATAGTTAGAAATCGCGGTGGGATC 1334
Query 2491 AAGAAAGCTCAAGAATTGGCTAAGGAGAAAGGTGAGCTTGCGTTAAAGAATCTGAATTGT 2550
||||||||||||||||| || |||||||||| ||| ||||||||||||||| ||||||||
Sbjct 1335 AAGAAAGCTCAAGAATTAGCAAAGGAGAAAGCTGAACTTGCGTTAAAGAATTTGAATTGT 1394
Query 2551 CTTCCGAGAAGTGGTTTCAGATCGGCTCTTGAGGATATGGTGATGTTTAATCTTGAAAGG 2610
||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1395 CTTCCTAGGAGTGGTTTCAGATCGGCTCTTGAGGATATGGTAATGTTTAATCTTGAAAGG 1454
Query 2611 ATTGATTAGCTTCAAAGGGTATTTGGCAG 2639
||||||||| |||||||||||||||||||
Sbjct 1455 ATTGATTAGTTTCAAAGGGTATTTGGCAG 1483
> AT1G17040.2 | Symbols: SHA | SH2 domain protein A | chr1:5824848-5828233
FORWARD LENGTH=2394
Length=2394
Score = 1308 bits (708), Expect = 0.0
Identities = 811/861 (94%), Gaps = 6/861 (1%)
Strand=Plus/Plus
Query 8 AGGTTCACTCTGACATGAGCGTTAGTGCACCTTTCCTTGTTCTAGATGAAAACAAGAAGA 67
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 449 AGGTTCACTCTGACATGAGTGTTAGTGCACCTTTCCTTGTTCTAGATGAAAACAAGAAGA 508
Query 68 TGATGCTTTTGCCATTGACTCTCCTTCACAATGAAGCTCCTGATCCTGTTAACATTTCTT 127
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 509 TGATGCTTTTGCCATTGACTCTCCTTCACAGGGAAGCTCCTGATCCTGTTAACACTTCTT 568
Query 128 CTTGGACTGAAGTTCCTAATGTTTCTACAACTGCTGAGTTTCCTCTTCAAAAATGGGTTC 187
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 569 CTTGGACTGAAGTTCCTAATGTTTCTACAACGGCTAAGTTTCCTCTTCAAAAATGGGTTC 628
Query 188 ATGTGGGTTGCGAGGTTTCTAGAAACTACATGCGCCTTTATATTTGTGGAGAGATTGTAG 247
|||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 629 ATGTGGGTTGTGAGGTTTCTAGAAACTATATGCGCCTTTATATTTGTGGAGAGCTTGTAG 688
Query 248 GAGAGCAAGTCTTAACTTCCTTGATGACCAATAGTACAAATTCAGATTGCGCACGAAAGA 307
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 689 GAGAGCAAGTCTTAACTTCCTTGATGACCAATGGTACAAATTCAGATTGCGCACGAAAGA 748
Query 308 TATCGTTATTCAGTGTTGGTGGAGATGGTTATAGTGTTCAGGGTTTCATCCACTGTGCTG 367
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 749 TATCGTTATTTAGTGTTGGTGGAGATGGTTATAGTGTTCAGGGTTTCATCCACAGTGCAG 808
Query 368 AAGTTTTGCCTTCTAATGTCCCGGCAAATTATCACTACACAAAGGACCCACCTTTATGGT 427
||||||||||||||||| || | |||| ||||||||||||||||||||||||||||||||
Sbjct 809 AAGTTTTGCCTTCTAATCTCTCTGCAAGTTATCACTACACAAAGGACCCACCTTTATGGT 868
Query 428 TATCTGTTGATAAGCCATCTACATCTGGAATTGGATTAGATAAAGATGGTGTTTGGATTA 487
||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| |
Sbjct 869 TATCTGTTGATAAGCCATCTACATCTGGAATTGAATTGGATGAAGATGGTGTTTGGAGTG 928
Query 488 TCGTTAGCGGAACATTTTGTTCCTTGGATGTTGTTTTAACCAATGCTATTGGACAGCCTG 547
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 929 TCGTTAGTGGAACATTTTGTTCCTTGGATGTTGTTTTAACCAATGCTATTGGACAGCCTG 988
Query 548 TGCACAAGGATGTGAAGGTTGTGGCTTCTCTACTGTATGCTGATAGTGGGATGCCA-GTT 606
||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct 989 TGCACAAGGATGTGAAGGTTGTGGCTTCTCTACTGTATGCTGATAGTGGGACGC-ATGTT 1047
Query 607 GAGAAGATGAGTGACTCGGAGGC-TCCCCTTTTGGTAAGCTATGAAGG-AGTTGAATTCT 664
||||||| |||||||| ||||| | || |||| |||||||||||||| | ||||||| |
Sbjct 1048 GAGAAGAGGAGTGACTTTGAGGCATTCC-TTTTAGTAAGCTATGAAGGCA-TTGAATTAT 1105
Query 665 CTGCTGAAGATAAGCCATGCAACTTATTGAACGGATGTGCTTCTTTCAAGCTCAAATTAT 724
||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1106 CTGCTGAAGATAAACCGTGCAACTTATTGAACGGATGTGCTTCTTTCAAGTTCAAATTAT 1165
Query 725 CTCAGCTTTCTTCCAAGAGTGATAAGAGATTGTTCTGTGTCAAATTCGAAATACCAGAAG 784
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1166 CTCAGCTTTCTTCCAAGAGTGATAAGAGGTTGTTCTGCATCAAATTCGAAATACCAGAAG 1225
Query 785 TGAAGGCCTATTATCCTTTCCTTGAAACTGTTACCAACCAAATCCGTTGCATTTCGAGGA 844
|||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct 1226 TGAAGGCCAATTATCCTTTCCTCGAAACTGTCACCAACCAAATCCGTTGCATTTCGAGAA 1285
Query 845 ACCATGATTCTCTTACCCCTA 865
||| ||||||| || || |||
Sbjct 1286 ACCGTGATTCTGTTTCCTCTA 1306
Score = 1164 bits (630), Expect = 0.0
Identities = 714/753 (95%), Gaps = 12/753 (2%)
Strand=Plus/Plus
Query 957 TTCCTCTATGAAACGGATCAGATTAGGGGAAGAAAAGGTTTCTGAGAGTGAGACTGAGAA 1016
||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||
Sbjct 1299 TTCCTCTATGAAACGGATCAGATTAGGAGAAGAAAAGGTTTCTGAGAGTAAGATTGTGAA 1358
Query 1017 TGGAAATGGTACGAGTATGGAATGGAGACCTCAGAACCATGAAGAAGAAGACGAAGAAGA 1076
||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1359 TGGAAATGGTACGAGTATGGAATGGAGGCCTCAGAACC------------ACGAAGAAGA 1406
Query 1077 TAACTCTTCAACTGATTCCGAAAACACTGAAATTAGAGACTCGACTGCTTTCAGGAGATA 1136
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1407 TAACTCTTCAACTGATTCCGAAAACACTGAAATGAGAGACTCGACTGCTTTCAGGAGATA 1466
Query 1137 TACAATCTCAGACTCGATTATTTTCAAATACTGCCTTGGAAACTTAACAGAGAGAGCTCT 1196
| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1467 TTCAATCCCAGACTGGATTATTTTCAAATACTGCCTTGGAAACTTAACAGAGAGAGCTCT 1526
Query 1197 TCTTCTGAAGGAAATCACAAATAATTCATCAGATGAAGAAGTCTCGGAATTTGTAGATCA 1256
||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct 1527 TCTTCTGAAGGAAATCACAAACAATTCATCAGACGAAGAAGTCTCGGAATTTGCAGATCA 1586
Query 1257 AGTTTCTCTCTATTCCGGATGCTTCCACCACAGCTATCAAATCAAAATGGCAAGACAATT 1316
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || |
Sbjct 1587 AGTTTCTCTCTATTCCGGATGCTCCCACCACGGCTATCAAATCAAAATGGCAAGAAAACT 1646
Query 1317 GATAGCAGAAGGAACAAATGCGTGGAATCTGATATCTCGGAACTATCAACATGTTCATTG 1376
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1647 GATAGCAGAAGGAACAAATGCGTGGAATCTGATCTCTCGGAACTATCGACATGTTCATTG 1706
Query 1377 GGACAATGTGGTAATTGAGATTGAAGAACATTTCATGAGAATAGCTAAATGCAGCAGTAG 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1707 GGACAATGTGGTAATTGAGATTGAAGAACATTTCATGAGAATAGCTAAATGCAGCAGTAG 1766
Query 1437 ATCTCTCACTCACCAGGATTTTGACCTTCTAAGAAGAATATGTGGATGCTATGAATACAT 1496
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1767 ATCTCTCACTCACCAGGATTTTGACCTTCTAAGAAGGATATGTGGATGCTATGAATACAT 1826
Query 1497 AACTCAAGAGAATTTTGAGAAAATGTGGTGTTGGTTGTTCCCTGTTGCTTCGGCTATATC 1556
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1827 AACTCAAGAGAATTTTGAGACAATGTGGTGTTGGTTGTTCCCTGTTGCTTCGGCTGTATC 1886
Query 1557 CAGGGGATTGATTAACGGAATGTGGCGCTCAGCTTCGCCTAAATGGATAGAAGGGTTTGT 1616
||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1887 AAGGGGGTTGATTAATGGAATGTGGCGCTCTGCTTCGCCTAAATGGATAGAAGGGTTTGT 1946
Query 1617 GACTAAAGAAGAGGCAGAACGTTCGCTTCAGAATCAAGTAGCGGGAACTTTCATTCTCAG 1676
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 1947 GACTAAAGAAGAGGCAGAACGTTCGCTTCAGAATCAAGTACCGGGCACTTTCATTCTCAG 2006
Query 1677 GTTCCCTACTTCAAGAAGCTGGCCACATCCTGA 1709
|||||||||||||||||||||||||||||||||
Sbjct 2007 GTTCCCTACTTCAAGAAGCTGGCCACATCCTGA 2039
> AT1G78510.1 | Symbols: SPS1 | solanesyl diphosphate synthase
1 | chr1:29535285-29537417 REVERSE LENGTH=1600
Length=1600
Score = 848 bits (459), Expect = 0.0
Identities = 773/924 (84%), Gaps = 24/924 (3%)
Strand=Plus/Plus
Query 1711 ATTGTTGGTGCAGAAAATCCGGTTTTGATATCTGCGGCTGAGCAAATCTTCAGTGCTGGT 1770
||||||||||| |||||||||||||||||||||||||||||||| || ||| | ||||||
Sbjct 567 ATTGTTGGTGCGGAAAATCCGGTTTTGATATCTGCGGCTGAGCAGATTTTCGGAGCTGGT 626
Query 1771 GGCAAGAGGATGAGACCGGGTTTGGTATTCCTTGTATCACGA-GCCACTGCGGAATTAGC 1829
|| || || ||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct 627 GGTAAAAGAATGAGACCGGGTTTGGTATTCCTTGTATCAC-ATGCCACGGCGGAATTAGC 685
Query 1830 TGGCTTAAAGGAACTTACAGTAGAACATCGGCGTTTAGG-TGAGATCATTGAGATGATTC 1888
||| |||||||||| ||| |||||| |||||||| || ||||||||| |||||||| |
Sbjct 686 AGGCCTAAAGGAACTAACAACAGAACACCGGCGTTT-GGCTGAGATCATCGAGATGATAC 744
Query 1889 ACACCGCAAGTTTGATACACGATGATGTGTTAGACGAAAGTGATATGCGAAGAGGAAAAG 1948
|||| ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| |
Sbjct 745 ACACTGCAAGCTTGATACACGACGATGTGTTAGACGAGAGTGACATGCGAAGAGGAAAGG 804
Query 1949 AAACGGTTCACGAGCTTTTCGGAACAAGAGTAGCTGTATTAGCTGGAGATTTCATGTTTG 2008
|||| ||||| ||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 805 AAACAGTTCATGAGCTTTTCGGCACAAGAGTAGCGGTGCTAGCTGGAGATTTCATGTTTG 864
Query 2009 CTCAAGCATCATGGTACTTAGCAAATCTCGAAAACCTCCAAGTCATTAAGCTCATAAGTC 2068
||||||| ||||||||||||||||||||||| || || |||| ||||||||||| ||||
Sbjct 865 CTCAAGCGTCATGGTACTTAGCAAATCTCGAGAATCTTGAAGTTATTAAGCTCATCAGTC 924
Query 2069 AGGTAATCAAAGATTTTGCAAGCGGTGAGATAAAGCAAGCATCAAGTTTATTCGATTGTG 2128
|||| |||||||| ||||||||||| ||||||||||| || || || ||||| || || |
Sbjct 925 AGGTGATCAAAGACTTTGCAAGCGGAGAGATAAAGCAGGCGTCCAGCTTATTTGACTGCG 984
Query 2129 ATGTCGAGCTTGATGACTACTTGCT-AAAGAGTTACTACAAGACAGCTTCATTAGTAGCT 2187
| | |||| || || ||||| || ||| |||| |||||||||||| || ||||| |||
Sbjct 985 ACACCAAGCTCGACGAGTACTTACTCAAA-AGTTTCTACAAGACAGCCTCTTTAGTGGCT 1043
Query 2188 GCAAGCACCAAAGGAGCTGCAATTTTCAGTAAAGTCGAAAGC--GAGGTCG-CAGAGCAA 2244
|| ||||||||||||||||| |||||||| | ||| || || || || | |||| |||
Sbjct 1044 GCGAGCACCAAAGGAGCTGCCATTTTCAGCAGAGTTGA--GCCTGATGT-GACAGAACAA 1100
Query 2245 ATGTATC-AGTTCGGAAAGAATCTCGGTTTATCTTTTCA-AGTAGTTGATGACATTCTGG 2302
||||| | |||| || |||||||||||| | ||||| || | |||||||||| ||| |||
Sbjct 1101 ATGTA-CGAGTTTGGGAAGAATCTCGGTCTCTCTTTCCAGA-TAGTTGATGATATTTTGG 1158
Query 2303 ACTTCACTCAATCCACAGAGCAGTTAGGGAAACCTGCAGCTAATGACTTAGCCAAAGGTA 2362
| |||||||| || ||||||||| | ||||| || |||| | ||| || || |||||||
Sbjct 1159 ATTTCACTCAGTCGACAGAGCAGCTCGGGAAGCCAGCAGGGAGTGATTTGGCTAAAGGTA 1218
Query 2363 ACATAACAGCGCCAGTGATCTTCGCACTAGAGAATGAGCCGAGGCTAAGAGAGATCATTG 2422
|| ||||||| || ||||| ||||| || |||| ||||| |||||||||||||||||||
Sbjct 1219 ACTTAACAGCACCTGTGATTTTCGCTCTGGAGAGGGAGCCAAGGCTAAGAGAGATCATTG 1278
Query 2423 AGTCTGAGTTTTGTGAGCCTGGATCGCTTGAAGAAGCGATTGAAATAGTTAGAAATCGCG 2482
|||| |||||||||||| | || || || ||||||||||||||| || | ||| | |
Sbjct 1279 AGTCAGAGTTTTGTGAGGCGGGTTCTCTGGAAGAAGCGATTGAAGCGGTGACAAAAGGTG 1338
Query 2483 GTGGGATCAAGAAAGCTCAAGAATTGGCTAAGGAGAAAGGTGA-G-CTTGCGT-TAAAGA 2539
| ||||| |||| ||| ||||||||||||| |||||||| ||| | | || | ||||||
Sbjct 1339 GGGGGATTAAGAGAGCACAAGAATTGGCTAGGGAGAAAGCTGATGAC--GC-TATAAAGA 1395
Query 2540 ATCTGA-ATTGTCTTCCGAGAAGTGGTTTCAGATCGGCTCTTGAGGATATGGTGATGTTT 2598
|||| | | ||||| || ||||||| ||||| |||||||| || ||||||||| ||| |
Sbjct 1396 ATCT-ACAGTGTCTACCTCGAAGTGGCTTCAGGTCGGCTCTAGAAGATATGGTGTTGTAT 1454
Query 2599 AATCTTGAAAGGATTGATTAGCTT 2622
|| || ||||| ||||||||||||
Sbjct 1455 AACCTCGAAAGAATTGATTAGCTT 1478
> AT1G78540.2 | Symbols: SHB | SH2 domain protein B | chr1:29541011-29544777
REVERSE LENGTH=2478
Length=2478
Score = 562 bits (304), Expect = 6e-159
Identities = 497/589 (84%), Gaps = 18/589 (3%)
Strand=Plus/Plus
Query 1131 GAGATATACAATCTCAGACTCGATTAT-TTTCAAATACTGCCTTGGAAACTTAA-CAGAG 1188
|||||| ||||||||||| || | || ||| || ||||||||||||||||||| | ||
Sbjct 1454 GAGATACACAATCTCAGATTCCACCATCTTT-AAGTACTGCCTTGGAAACTTAATC-GAC 1511
Query 1189 AGAGCTCTTCTTCTGAAGGAAATCACAAATAATTCATCAGATGAAGAAGTCTCGGAATTT 1248
| |||||| ||||| |||||||||||||| || |||||||| || ||||| | |||||||
Sbjct 1512 AAAGCTCTACTTCTAAAGGAAATCACAAACAACTCATCAGACGATGAAGTTTTGGAATTT 1571
Query 1249 GTAGATCAAGTTTCTCTCTATTCCGGATGCTTC-CACCACAGCTATCAAATCAAAATGGC 1307
| | |||| |||||||| || || ||||| ||| ||||| |||||||||||||| |||||
Sbjct 1572 GCAAATCAGGTTTCTCTGTACTCTGGATG-TTCACACCATAGCTATCAAATCAACATGGC 1630
Query 1308 AAGACAATTGATAGCAGAAGGAACAAATGCGTGGA-ATCTGATATCTCGGAACTATCAAC 1366
|||| | | |||||||||||||||||||| |||| || |||||||||||||| ||||||
Sbjct 1631 AAGAGAGCTAATAGCAGAAGGAACAAATGCATGGATAT-TGATATCTCGGAACAATCAAC 1689
Query 1367 ATGTTCATTGGGACAATGTGGTAAT-TGAGATTGAAGAACATTTCATGAGAATAGCTAAA 1425
||||||||||||| |||||||| | |||||||||||||||||||||||| || | |||
Sbjct 1690 ATGTTCATTGGGATAATGTGGT-CTATGAGATTGAAGAACATTTCATGAGGATTTCAAAA 1748
Query 1426 TGCAGCAGTAGATCTCTCACTCACCAGGATTTTGACCTTCTAAGAAGAATATGTGGATGC 1485
|||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||||
Sbjct 1749 TGCAGCAGTAGATCTCTCACCCACCAGGATTTTGAGCTTCTAAGGAGAATATCAGGATGC 1808
Query 1486 TATGAATACATAACTCAAGAGAATTTTGAGAAAATGTGGTGTTGGTTGTTCCCTGTTGCT 1545
|| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1809 TACGAGTACATAACTCAGGAGAATTTTGAGAAAATGTGGTGTTGGTTGTTCCCTGTTGCT 1868
Query 1546 T-CGGCTATATCCAGGGGATTGATTAACGGAATGTGGCGCTCAGCTTCGCCTAAATGGAT 1604
| | | |||||| |||| ||||| |||||||||||||| || | ||||||||||||||
Sbjct 1869 TACTCC-ATATCCCGGGGCTTGATAAACGGAATGTGGCGTTCTTCATCGCCTAAATGGAT 1927
Query 1605 AGAAGGGTTTGTGACTAAAGAAGAGGCAGAACGTTCGCTTCAGAATC-AAGTAGCGGGAA 1663
||||| || | || || ||||| || |||| ||||||||| | | ||| | | ||||
Sbjct 1928 TGAAGGATTCATCACCAAGGAAGAAGCTGAACATTCGCTTCA-AGGCCAAGAACCAGGAA 1986
Query 1664 CTTTCATTCTCAGGTT-CCCTACTTCAAGAAGCT-GGCCACATCCTGAT 1710
| ||||| || | ||| ||||| |||||||| || |||| || ||||||
Sbjct 1987 CCTTCATACT-ACGTTTCCCTATTTCAAGAA-CTTGGCCTCACCCTGAT 2033
Score = 549 bits (297), Expect = 5e-155
Identities = 683/861 (79%), Gaps = 60/861 (7%)
Strand=Plus/Plus
Query 7 CAGGTTCACTCTGACATGAGCGTTAGTGCACCTTTCCTTGTTCTAGATGAAAACAAGAAG 66
||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 360 CAGGTTCACTCAGACATGAGTGTTAGTGCACCTTTCCTTGTGCTAGATGAAAACAAGAAG 419
Query 67 ATGATGCTTTTGCCATTGACTCTCCTTCACAATGAAGCTCCTGATCCTGTTA-ACATTTC 125
|||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||
Sbjct 420 ATGATGCTTTTGCCATTGACTCTCCTTCACAAGGAAGCTCCTGATCCTGT-AGACACTTC 478
Query 126 TTCTTGGACTGAAGTTCCTAATGTTTCTACAAC-TGCTGAGTTTCCTCTTCAAAAATGGG 184
||| ||||| ||||||||| |||||||||| | | ||||||||||| |||||||||
Sbjct 479 TTCCTGGACACAAGTTCCTAGCGTTTCTACAAAATCCA-AGTTTCCTCTTGAAAAATGGG 537
Query 185 TTCATGTGGGTTGCGAGGTTTCTAGAAACTACATGCGCCTTTATATTTG-TGGAGAGATT 243
||||||||||||| |||||||||||||| | ||| | |||| |||| | |||| | ||
Sbjct 538 TTCATGTGGGTTGTGAGGTTTCTAGAAATTTTATGAGGCTTTTTATT-GATGGAAATATG 596
Query 244 GTAGGAGAGCAAGT-CTTAACTTCCTTGATGACCAATAGTACAAAT-TCA-GATTG-CGC 299
| ||||||||| || | | ||||| ||| |||| || || || | || || || | |
Sbjct 597 GAAGGAGAGCA-GTTCGTGACTTCTTTGCTGAC-AA-AGAACGCCTATCCCGAGTGTC-C 652
Query 300 ACGAAAGATATCGTTATTCAGTGTTGGTGGAGATGGTTATAGTGTTCAGGGTTTCATCCA 359
|||||||||||| |||| |||||||| |||||||||||||| || || |||||||||||
Sbjct 653 TCGAAAGATATCGCTATTTAGTGTTGGCGGAGATGGTTATAGCGTACAAGGTTTCATCCA 712
Query 360 CTGTGCTGAAGTTTTGCCTTCTAATG-TCCCG-GCAAATTATCACTACACAAAGGACCCA 417
||||| ||||| || ||| ||| || || || | | |||| || | |||||||||
Sbjct 713 ATGTGCAGAAGTCTTACCTGCTAGTGATCACGTGGAGC--ATCATTATATGAAGGACCCA 770
Query 418 CCTTTA-TGGTTATCTGTTGATAAGCCATC-TACATCTGGAATTGGATTAGATAAA-GAT 474
||| || || |||||||| |||| |||| | |||| || || ||||||| | | |
Sbjct 771 CCTCTAATG-TTATCTGTCAATAAATCATCCT-CATCGGGGATCAAATTAGATGATTG-T 827
Query 475 GGTGTTTGG-ATT-ATCGTTAGC--GGAACATTTTGTTCCTTGGATGTTGTTTTAACCAA 530
||||||||| | ||| || || ||| || || ||||||||||||| ||||| ||||
Sbjct 828 GGTGTTTGGCAGGCATC-TT-GCAAGGAG-ATGTT-TTCCTTGGATGTTCTTTTATCCAA 883
Query 531 TGCTATTGGACAGCCTGTGCACAAGGATGTGAAGGTTGTGGCTTCTCTACTGTATGCTGA 590
||| ||||| ||||||||||||||||||||| ||||||| || || ||||||||||| ||
Sbjct 884 TGCCATTGGCCAGCCTGTGCACAAGGATGTGGAGGTTGTTGCATCACTACTGTATGCCGA 943
Query 591 TAGTGGGATGCCAGTTGAGAAGATGAGTGACTCGGAGGCTCCCCTTTTGGTAAGCTATGA 650
|| | || | | |||||| |||| | |||||||| |||||| |||| ||||
Sbjct 944 TACACT--T-CCGGAGGCCAAGATGGGTGAAGCTGAGGCTCCTCTTTTGATAAGAGATGA 1000
Query 651 AGGAGTTGAATTCTC-TGCTGAAGATA-AGCC-ATGCAA-CTTATTGAACGGATG-TGCT 705
||||||| ||||||| | |||| |||| | || || ||| || ||| || ||| | | |
Sbjct 1001 AGGAGTTCAATTCTCAT-CTGATGATAGA-CCGAT-CAAACT-ATTAAATGGACGCT-CA 1055
Query 706 TC-TTTCAAGCTCAA-ATTATCTCAGCTTTCTTCCAAGAGTGATAAGAGATTGTTCTGTG 763
|| ||| ||||| || || ||||||||||| ||||| |||||| | ||||||||||| |
Sbjct 1056 TCCTTT-AAGCTAAAGATC-TCTCAGCTTTCCTCCAATAGTGATGACAGATTGTTCTG-G 1112
Query 764 -TCAAATTCGAAATACCAGAA-G-TGAAGGCCTATTATCCTTTCCTTGAAACTGTTACCA 820
| ||||| | ||||| | || | | ||| |||||||||||||| || ||||| |||
Sbjct 1113 ATTAAATTTGGAATACGA-AATGCTAAAG----ATTATCCTTTCCTTCAAGCTGTTTCCA 1167
Query 821 A-CCAAATCCGTTGCATTTCG 840
| |||| ||||||||||||||
Sbjct 1168 ATCCAA-TCCGTTGCATTTCG 1187
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131036055116
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5