BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920643
Length=1797
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17270.1 | Symbols: | O-fucosyltransferase family protein |... 2643 0.0
AT5G50420.1 | Symbols: | O-fucosyltransferase family protein |... 1230 0.0
AT1G53770.2 | Symbols: | O-fucosyltransferase family protein |... 248 1e-64
> AT1G17270.1 | Symbols: | O-fucosyltransferase family protein
| chr1:5909249-5911693 REVERSE LENGTH=1958
Length=1958
Score = 2643 bits (1431), Expect = 0.0
Identities = 1685/1801 (94%), Gaps = 44/1801 (2%)
Strand=Plus/Plus
Query 1 CATTGATTTCCAGCTCGTCGATGGTGCGCAACTCGTCGGACGATGAAGAGGACCACCGGA 60
|||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| |
Sbjct 50 CATTGATTACCAGCTCGGCGATGGTGCGCAACTCGTCGGACGAAGAAGAGGACCACCGCA 109
Query 61 ATTTAATCCCACAGAACGACACCAGAGACAACGATCTCGACCTCCGCCGTGAAGACGAGC 120
||||||||||||| |||||||||||||||||||||||| | | | | || ||
Sbjct 110 ATTTAATCCCACAAAACGACACCAGAGACAACGATCTC-A-AT----C-T----AC--GC 156
Query 121 TTCACTCCGTCACCACCGCCAGGGCCATAAATAGGGCTAACGGCGGTGGCAGGAGTCCGA 180
| || | | ||||||| || |||||| ||||||||||||||||||||||||||
Sbjct 157 --C-CT--G-----A-CGCCAGGACCGTAAATATGGCTAACGGCGGTGGCAGGAGTCCGA 205
Query 181 GATCGGCGTTTCAGATCGATGAAATCGTATCGCGAGCTCGAAACCGTTGGAAAATCTCAG 240
|||||||||| ||||||||||||||| | ||||||||||| || ||||||||||||||||
Sbjct 206 GATCGGCGTTACAGATCGATGAAATCTTGTCGCGAGCTCGGAATCGTTGGAAAATCTCAG 265
Query 241 TTAACAAGCGTTACGTCGTTGCTGCCGTCTCTCTAACTCTGTTCGTTGGA-TATCTGTTC 299
|||||||||||||||||||||||||||||||||||||| | ||||| ||| | |||||||
Sbjct 266 TTAACAAGCGTTACGTCGTTGCTGCCGTCTCTCTAACTTTATTCGTCGGACT-TCTGTTC 324
Query 300 TTATTTACTGATACTCGTAGATTCTTCTCAGTAGATCTCTCGAGCTTTAAGCTTGATCCA 359
|||||||||||||||||| | | | || | |||||||||||||||||||||||
Sbjct 325 TTATTTACTGATACTCGT--A--CAT-TC------T-TCTCGAGCTTTAAGCTTGATCCA 372
Query 360 ATGTCGAGTCGGGTCAAGGAATCTGAGCTCCAAGCTCTGAATCTTCTGAGGCAACAACAG 419
||||| || || ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 373 ATGTCAAGCCGTGTCAAGGAATCTGAGCTCCAAGCTCTGAATCTTCTTAGGCAGCAACAG 432
Query 420 CTCGCACTTGTCTCTCTGTTGAACCGTGCGATTTTCAATTCTTCGAATGCAATTGGTTCT 479
|| || || |||||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct 433 CTAGCGCTAGTCTCTCTGTTGAACCGTACGAATTTCAATTCTTCGAATGCAATTAGTTCT 492
Query 480 TCTGTATTAATAGACAATGTGAAAGCTGCTCTACTGAAGCAGATTTCAGTTAATAAGGAA 539
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 493 TCTGTAGTAATAGACAATGTGAAAGCTGCTCTACTGAAGCAGATTTCAGTGAATAAGGAA 552
Query 540 ATCGAAGAGGTCCTTCTTTCACCACACAAGACTGGGAATTACTC-AGTCACTGGTTCTGG 598
|||||||| || |||||||||||||||| ||||||||||||||| | |||||| ||||||
Sbjct 553 ATCGAAGAAGTGCTTCTTTCACCACACAGGACTGGGAATTACTCTA-TCACTGCTTCTGG 611
Query 599 TTCAGATAGTATCACTGGTTCTTACT-ACGATGATAGGTGTAAAAAGGTAGATCAGAAGT 657
|||||||||| ||||||||||||| | ||| ||||| |||| |||||||||||||||||
Sbjct 612 TTCAGATAGTTTCACTGGTTCTTA-TAACGCTGATATATGTAGAAAGGTAGATCAGAAGT 670
Query 658 TGTTGGAGCGGAAAACGATCGAATGGAAGCCGAGACCAGATAAGTTCCTTTTTGCTATCT 717
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 671 TGTTGGACCGGAAAACGATCGAATGGAAGCCGAGACCAGATAAGTTCCTATTTGCTATCT 730
Query 718 GTCTCTCAGGTCAAATGAGTAACCACTTGATTTGCTTAGAGAAACATATGTTCTTTGCTG 777
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 731 GTCTCTCAGGTCAAATGAGTAACCACTTGATTTGTTTAGAGAAACATATGTTCTTTGCTG 790
Query 778 CGCTGCTGGATCGAGTTCTCGTGATTCCAAGCTCTAAGTTTGATTACCAGTATGATAGAG 837
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 791 CGCTACTGGATCGAGTTCTTGTGATTCCAAGCTCTAAGTTTGATTACCAGTATGATAAAG 850
Query 838 TGATAGATATAGAGCGGATTAATACGTGCTTGGGAAGAACTGTTGTCATTTCTTTTGATC 897
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 851 TGATTGATATAGAGCGGATTAACACGTGCTTGGGAAGAACTGTTGTCATTTCTTTTGATC 910
Query 898 AGTTCAAGGAGATTGATAAGAAGAAAAATGCTCACATTGACACG-TTCATCTGTTACTTC 956
||||||||||||||||||||||||| |||||||||||||||| | |||||||||||| ||
Sbjct 911 AGTTCAAGGAGATTGATAAGAAGAACAATGCTCACATTGACA-GATTCATCTGTTACGTC 969
Query 957 TCATCGCCACAGCCTTGTTATGTGGATGAGGATCATATCAAGAAGCTCAAGGGATTGGGG 1016
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 970 TCGTCGCCACAGCCTTGTTATGTTGATGAGGATCATATCAAGAAGCTCAAGGGATTGGGG 1029
Query 1017 GTTTCCATTGGTGGGAAGCTTGAGGCTCCTTGGATTGAAGATATAAAGAAGCCAACTAAG 1076
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1030 GTTTCCATTGGTGGGAAGCTTGAGGCTCCTTGGAGTGAAGATATAAAGAAGCCAACTAAG 1089
Query 1077 CGAACTTCTCAAGAGGTAGTGGAAAAGTTTAAGTCTGATGATGGTGTGATCGCCATAGGG 1136
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1090 CGGACTTCTCAAGAGGTAGTGGAAAAGTTTAAGTCCGATGATGGTGTGATCGCCATAGGG 1149
Query 1137 GATGTCTTCTATGCTGATATGGAGCAAGATTTGGTGATGCAGCCTGGTGGACCCATCAAT 1196
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1150 GATGTCTTCTATGCTGATATGGAGCAAGATTTGGTGATGCAGCCTGGTGGACCCATCAAC 1209
Query 1197 CACAAATGTAAAACACTGATCGAACCCAGTAGGCTCATTTTGGTGACGGCACAGCGATTC 1256
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1210 CATAAATGTAAAACACTGATCGAACCCAGTAGGCTCATTTTGGTGACGGCACAACGATTC 1269
Query 1257 ATCCAGACATTCTTAGGAAAGAATTTCATCTCGCTTCATCTCCGTAGACATGGGTTCCTT 1316
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1270 ATCCAGACATTCTTAGGAAAGAATTTCATCTCGCTTCATCTCCGTAGGCATGGGTTCCTT 1329
Query 1317 AAGTTCTGCAATGCAAAATCGCCAAGTTGCTTTTATCCCATACCACAAGCTGCAGACTGC 1376
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1330 AAGTTCTGCAATGCAAAATCGCCAAGTTGTTTTTATCCCATACCACAAGCTGCAGACTGC 1389
Query 1377 ATCAGTCGGATGGTGGAAAGGGCCAATGCTCCAGTCATCTACCTTTCAACAGATGCTGCA 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1390 ATCAGTCGGATGGTGGAAAGGGCCAATGCTCCAGTCATCTACCTTTCAACAGATGCTGCA 1449
Query 1437 GAAAGCGAAACCGGTCTGCTTCAGTCACTAGTAGTCGTTGATGGAAAAGTCGTTCCCCTT 1496
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GAAAGCGAAACCGGTCTTCTTCAGTCACTAGTAGTCGTTGATGGAAAAGTCGTTCCCCTT 1509
Query 1497 GTCAAACGTCCACCTCGCAACTCTGCAGAAAAGTGGGACTCGTTGTTGTATAGACATGGT 1556
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 GTCAAACGTCCACCTCAAAACTCTGCAGAAAAGTGGGACTCGTTGTTGTATAGACATGGT 1569
Query 1557 ATAGAAGATGACTCTCAGGTGGATGCTATGTTGGATAAGACTATATGTGCAATGTCCAGT 1616
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1570 ATAGAAGATGACTCTCAGGTGTATGCTATGTTGGATAAGACTATATGTGCAATGTCCAGT 1629
Query 1617 GTCTTCATTGGAGCATCGGGTTCTACTTTTACAGAGGATATCTTGCGGCTAAGAAAAGAC 1676
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1630 GTATTCATCGGAGCATCGGGTTCTACTTTTACAGAGGATATCTTGCGGCTAAGAAAAGAC 1689
Query 1677 TGGGGAACTTCATCGATGTGCGATGAGTATCTCTGTAGAGGTGAAGAACCAAACTTCATA 1736
|||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1690 TGGGGAACTTCATCTATGTGCGATGAGTATCTCTGTCGAGGCGAAGAACCAAACTTCATA 1749
Query 1737 GCTGAAAATGAATAAAAAAGTCAACACATTCGTTAACTTTCCTCTGTTTCCATGGTTCTT 1796
|||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1750 GCTGAAAATGAATAAACAAGTAAACACATTCGTTAATTTTCCTCTGTTTCCATGGTTCTT 1809
Query 1797 C 1797
|
Sbjct 1810 C 1810
> AT5G50420.1 | Symbols: | O-fucosyltransferase family protein
| chr5:20530206-20532856 REVERSE LENGTH=2169
Length=2169
Score = 1230 bits (666), Expect = 0.0
Identities = 1322/1629 (81%), Gaps = 84/1629 (5%)
Strand=Plus/Plus
Query 168 GGCAGGAGTCCGAGATCGGCGTTTCAGATCGATGAAATCGTATC-GCGAGCTCGAA-ACC 225
||| ||| || ||||||||||||||||||||| || || || | |||| || || |||
Sbjct 333 GGCGGGAATCAGAGATCGGCGTTTCAGATCGACGACATTTTA-CATCGAG-TCCAACACC 390
Query 226 GTTGGAAAATCTCAG-TTAACAAGCGTTACGTCGTTG-CTGCCGTCTCTCTAACTCTGT- 282
|| |||| ||||| | | ||||||||||||||| ||| || ||| ||||||| | | |
Sbjct 391 GTGGGAAGATCTC-GCTCAACAAGCGTTACGTCATTGTCT-TCGTTTCTCTAA-T-TATC 446
Query 283 TC-GTTGGAT-ATCTGTTCTTATTTACTGATACTCGTAG-ATTCTTCT-CAGTAG-ATCT 337
|| | || | ||| |||||| | |||||| ||||| | | | || | | | | || |
Sbjct 447 TCAATCGG-TCTTCTCTTCTTACTCACTGATCCTCGT-GAACTATT-TGC-GGCGAATTT 502
Query 338 CTCGAGCTTTAAGCTTGATCCAATGTCGAGTCGGGTCAAGGAATCTGAGCTCCAAGCTCT 397
|||||| |||||||| |||||| |||||| ||| ||||| ||||||||||| | ||| |
Sbjct 503 CTCGAGTTTTAAGCTGGATCCATTGTCGAATCGTGTCAAAGAATCTGAGCTTCGTGCTTT 562
Query 398 GAATCTTCTGAGGCAACAACAGCTCGCACTTGTCTCTCTGTT-GAA----CCG-T-GCG- 449
| |||||||||| |||||||||||||| ||| | ||||| || ||| || | | |
Sbjct 563 GTATCTTCTGAGACAACAACAGCTCGCGCTTCTATCTCT-TTGGAATGGTACGTTGGTGA 621
Query 450 AT--TT-TC--AAT---TCTTCGAATGCAATT-GGTTCTTCTGTATTAATAGACAATGTG 500
|| || || ||| ||| ||| || || || || ||||| || | || |||||
Sbjct 622 ATCCTTCTCTTAATCAATCTGAGAACGC-TTTGGGATCGTCTGTTTTGTTTGAGGATGTG 680
Query 501 AAAGCTGCT-CTACTGAAGCAGATTTCAGTT-AATAAGGAAATCGAAGAGGTCCTTCTTT 558
||| ||||| | | ||||||||||||| || |||||||| ||| ||||||| ||||| |
Sbjct 681 AAATCTGCTGTTTC-GAAGCAGATTTCA-TTGAATAAGGAGATCCAAGAGGTGCTTCTAT 738
Query 559 CACCACACAAGACTGGGAATTACT-CAGT--CACTGGT-TCTGGTTCAGATAGTATCACT 614
|||||||| || | | ||||||| | || ||| | | | || ||| | | | | | |
Sbjct 739 CACCACACCGGAGTAGCAATTACTCCGGTGGCACCGATGT-TGATTC-GGT-G-A--A-T 791
Query 615 GGTTCTTACTACGATGATAGGTGTA-AAAAGGTAGATCAGAAGTTGTTGGAGCGGAAAAC 673
||| | | | || |||| |||| |||| || ||||||||||||| || ||||||||
Sbjct 792 --TTC-T-C-A-TATAATAGATGTAGAAAA-GTGGATCAGAAGTTGTCAGATCGGAAAAC 844
Query 674 -GATCGAATGGAAGCCGAGACCAGATAAGTTCCTTTTTGCTATCTGTCTCTCAGGTCAAA 732
| | || |||||||| ||| | |||||||| || || ||||| ||||||||||||||||
Sbjct 845 TG-TAGAGTGGAAGCCTAGATCTGATAAGTTTCTATTCGCTATTTGTCTCTCAGGTCAAA 903
Query 733 TGAGTAACCACTTGATTTGCTTAGAGAAACATATGTTCTTTGCTGCGCTGCTGGATCGAG 792
|||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 904 TGAGTAACCATTTGATATGTTTAGAGAAACATATGTTCTTTGCTGCATTGCTGGATCGAG 963
Query 793 TTCTCGTGATTCCAAGCTCTAAGTTTGATTACCAGTATGATAGAGTGATAGATATAGAGC 852
|| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 TTTTGGTGATACCTAGCTCTAAGTTTGATTACCAGTATGATAGAGTGATAGATATAGAGC 1023
Query 853 GGATTAATACGTGCTTGGGAAGAACTGTTGTCATTTCTTTTGATCAGTTCAAGGAGATTG 912
||||||| || ||||||||||||| |||||| || ||||||||||||| ||||| | |
Sbjct 1024 GGATTAACACTTGCTTGGGAAGAAATGTTGTTGTTGCTTTTGATCAGTTTAAGGAAAAGG 1083
Query 913 ATAAGAAGAAAAATGCTCACATTGACACG-TTCATCTGTTACTTCTCATCGCCACAGCCT 971
|| ||||| || || ||||| || ||||| |||||||| ||||| ||||||| |
Sbjct 1084 CGAAAAAGAATCATTTTCGGATTGAT-CGGTTCATATGTTACTTTTCATCACCACAGCTT 1142
Query 972 TGTTATGTGGATGAGGATCATATCAAGAAGCTCAAGGGATTGGGGGTTTCCATTGGTGGG 1031
||||||||||||||||| ||||| || ||||| || || |||||| ||||||||| ||||
Sbjct 1143 TGTTATGTGGATGAGGAACATATTAAAAAGCTGAAAGGTTTGGGGATTTCCATTGATGGG 1202
Query 1032 AAGCTTGAGGCTCCTTGGATTGAAGATATAAAGAAGCCAA-CTAAGCGAACT-TCTCAAG 1089
||||||||||||||||||| |||||| ||||||||||| | | ||| ||||| | ||||
Sbjct 1203 AAGCTTGAGGCTCCTTGGAGTGAAGACATAAAGAAGCCGAGC-AAGAGAACTGTG-CAAG 1260
Query 1090 AGGT--AG-TGGAAAAGTTTAAGTCTGATGATGGTGTGATCGCCATAGGGGATGTCTTCT 1146
| || || || || ||||||||||||||||| |||||| || || |||||||||||||
Sbjct 1261 ACGTCCAGATG-AA--GTTTAAGTCTGATGATGATGTGATTGCAATCGGGGATGTCTTCT 1317
Query 1147 ATGCTGATATGGAGCAAGATTTGGTGATGCAGCCTGGTGGACCCATCAATCACAAATGTA 1206
||||||||||||||||||||| ||||||||| ||||||||||| || || ||||| ||||
Sbjct 1318 ATGCTGATATGGAGCAAGATTGGGTGATGCAACCTGGTGGACCTATTAACCACAAGTGTA 1377
Query 1207 AAACACTGATCGAACCCAGTAGGCTCATTTTGGTGACGGCACAGCGATTCATCCAGACAT 1266
| ||||| |||||||| |||| ||| || ||| |||| |||||| ||||||||||||| |
Sbjct 1378 AGACACTAATCGAACCTAGTAAGCTGATCTTGTTGACCGCACAGAGATTCATCCAGACCT 1437
Query 1267 TCTTAGGAAAGAATTTCATCTCGCTTCATCTCCGTAGACATGGGTTCCTTAAGTTCTGCA 1326
|||| ||||||||||||||| | |||||| |||| |||||||||||||| || || ||||
Sbjct 1438 TCTTGGGAAAGAATTTCATCGCACTTCATTTCCGCAGACATGGGTTCCTCAAATTTTGCA 1497
Query 1327 ATGCAAAATCGCCAAGTTGCTTTTATCCCATACCACAAGCTGCAGACTGCATCAG-TCGG 1385
|||||||||||||||||||||| ||||| || |||||||||||||| |||||| | ||||
Sbjct 1498 ATGCAAAATCGCCAAGTTGCTTCTATCCAATTCCACAAGCTGCAGAGTGCATC-GCTCGG 1556
Query 1386 ATGGTGGAAAGGGCCAATG-CTCCAGTCATCTACCTTTCAACAGATGCTGCAGAAAGCGA 1444
|| |||||||| |||||| | | ||||||||| ||||||||||||||||||||||| ||
Sbjct 1557 ATAGTGGAAAGATCCAATGGCGC-AGTCATCTATCTTTCAACAGATGCTGCAGAAAGTGA 1615
Query 1445 AACCGGTCTGCTTCAGTCACTAGTAGTCGTTGATGGAAAAGTCGTTCCCCTTGTCAAACG 1504
|| |||||||||||||||| || || || ||||||||| | || || |||||||||||
Sbjct 1616 GACAAGTCTGCTTCAGTCACTTGTTGTGGTAGATGGAAAAATTGTGCCTCTTGTCAAACG 1675
Query 1505 TCCACCTCGCAACTCTGCAGAAAAGTGGGACT-CGTTGTTGTATAGACATGGTATAGAAG 1563
|||||| || || || || ||||||||||| | | ||||| ||| ||||||||||||| |
Sbjct 1676 TCCACCGCGTAATTCAGCTGAAAAGTGGGA-TGCATTGTTATATCGACATGGTATAGAGG 1734
Query 1564 ATGACTCTCAGGTGGATGCTATG-TTGGATAAGACTATATGTGCAATGTCCAGTGTCTTC 1622
||||||||||||||||||| ||| ||| |||| || ||||| || |||||||| || |||
Sbjct 1735 ATGACTCTCAGGTGGATGCAATGCTTG-ATAAAACGATATGCGCCATGTCCAGCGTATTC 1793
Query 1623 ATTGGAGCATCGGGTTCTACTTTTACAGAGGATATCTTGCGGCTAAGAAAAGACTGGGGA 1682
|||||||| ||||| || ||||| ||||| ||||| ||| ||||||| ||||| ||||||
Sbjct 1794 ATTGGAGCCTCGGGATCAACTTTCACAGAAGATATATTGAGGCTAAGGAAAGATTGGGGA 1853
Query 1683 ACTTCATCGATGTGCGATGAGTATCTCTGTAGAGGTGAAGAACCAAACTTCATAGCTGAA 1742
|| || || | |||||||||||| ||||| |||| ||||| |||||||| ||||| |||
Sbjct 1854 ACATCCTCTACGTGCGATGAGTACCTCTGCCGAGGGGAAGAGCCAAACTTTATAGCAGAA 1913
Query 1743 AATGAATAA 1751
||||||||
Sbjct 1914 GATGAATAA 1922
> AT1G53770.2 | Symbols: | O-fucosyltransferase family protein
| chr1:20071311-20073758 REVERSE LENGTH=2005
Length=2005
Score = 248 bits (134), Expect = 1e-64
Identities = 525/709 (74%), Gaps = 45/709 (6%)
Strand=Plus/Plus
Query 641 AAAGGTAGATCAGAAGTTG-TTGGAGCGGAAAACGA-TCGAATGGAAGCCGAGACCAGAT 698
||| || |||||||||||| ||| | |||| |||| || ||||||||||||| || |||
Sbjct 621 AAA-GTGGATCAGAAGTTGAATGG-GAGGAAGACGATTC-AATGGAAGCCGAGGCCGGAT 677
Query 699 AAGTTCCTTTTTGCTATCTGTCTCTCAGGTCAAATGAGTAACCACTTGATTTGCTTAGAG 758
||||| || || || || ||| | || ||||||||||||||||||||||||||||| |||
Sbjct 678 AAGTTTCTATTCGCCATTTGTTTGTCTGGTCAAATGAGTAACCACTTGATTTGCTTGGAG 737
Query 759 AAACATATGTTCTTTGCTGCGCTGCTGGATCGAGTTCTCGTGATTCCAAGCTC-TA-AGT 816
|| |||||||||||||| || ||||| | || ||||| ||||| || || || || | |
Sbjct 738 AAGCATATGTTCTTTGCAGCATTGCTGAAACGTGTTCTTGTGATCCCTAG-TCATAGA-T 795
Query 817 TTGATTACCAGTAT-GATAGAGTGATAGATATAGAGCGGATTAATACGTGCTTGGGAAGA 875
||||||| || || | |||| | || ||||| || || || ||||| || ||||||||
Sbjct 796 TTGATTATCATTACAG-TAGAATCATCGATATTGATCGAATCAATACTTGTTTGGGAAGG 854
Query 876 ACTGTTGTCATTTCTTTTGATCAGTTC---AAGGAG-ATT-GA-TAAGAAGAA--A--A- 924
|||||||| |||||||||| |||| ||| || || || || |||||| | |
Sbjct 855 ACTGTTGTGGTTTCTTTTGAGGAGTTTTGGAAGAAGGATAAGAATAGGAAGAAGCATCAT 914
Query 925 -ATGCTCACATTGACACG-TTCATCTGTTACTTCTC-ATCGCCACAGCCTTGTTATGTGG 981
||| ||| ||| | | | ||||| ||||||||||| | || | || |||||||| |
Sbjct 915 CATGTTCATATTAATA-GATTCATATGTTACTTCTCGAAA-CCGGAACCGTGTTATGTAG 972
Query 982 ATGAGGATCATATCA-AGAAGCTCAAGGGATTGGGGGTTTCCATTGGTGGGAAGCTTGAG 1040
|| | || ||||| | | ||| | || | |||||| | | |||| |||||||| ||
Sbjct 973 ATAAAGAGCATATTACA-AAGTTGAAAGCTTTGGGGATCACTGTTGGAGGGAAGCTAGAC 1031
Query 1041 GCTCCTTGG-ATTGAAGATATAAAGAAGCCAA-CTAAGCGA-ACTTCTCAAGAGGTAGTG 1097
| || ||| | |||||||| || ||||| | || | | || || | || || | |
Sbjct 1032 ACACCATGGGAA-GAAGATATTGCGAGGCCAAGC-AA-CAAGACAGCTGAGGAAGTGGAG 1088
Query 1098 GAAAAGTTTA-AGTCTGATGATGGTGTGATCGCCATAGGGGATGTCTTCTATGCTGATAT 1156
| || |||| | || ||||| | ||| || || || |||||||| ||||||||| || |
Sbjct 1089 GCTAATTTTAGA-TCAGATGACGATGTTATTGCGATTGGGGATGTGTTCTATGCTAATGT 1147
Query 1157 GGAGCA-AGATTTGGTGATGCAGCCTGGTGGACCCATCAATCACAAATGTAAAACACTGA 1215
||| | ||| | |||||||||||||||||| || | |||||| || | ||| |||
Sbjct 1148 TGAG-AGAGAGTGGGTGATGCAGCCTGGTGGTCCTGTTGCTCACAAGTGCAGAACTTTGA 1206
Query 1216 TCGAACCCAGTAGGCTCATTTTGGTGACGGCACAGCGATTCATCCAGACATTC-TTAGGA 1274
| ||||| | |||| ||||| | || |||||| |||| |||||||| ||| || ||
Sbjct 1207 TTGAACCAAACCGGCTTATTTTACTCACTGCACAGAGATTTATCCAGACTTTCCTT-GGC 1265
Query 1275 AAGAATTTCATCT-CGCTTCATCTCCGTAGACATGGGTTCCTT-AAGTT 1321
||||| | ||| | | |||||| |||| || ||||| ||| || |||||
Sbjct 1266 AAGAACTACAT-TGCTCTTCATTTCCGCAGGCATGGATTC-TTGAAGTT 1312
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88905165195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5