BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920646
Length=1671
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17290.1 | Symbols: AlaAT1 | alanine aminotransferas | chr1:... 2798 0.0
AT1G72330.3 | Symbols: ALAAT2 | alanine aminotransferase 2 | ch... 1099 0.0
> AT1G17290.1 | Symbols: AlaAT1 | alanine aminotransferas | chr1:5922630-5926400
FORWARD LENGTH=2080
Length=2080
Score = 2798 bits (1515), Expect = 0.0
Identities = 1616/1665 (97%), Gaps = 6/1665 (0%)
Strand=Plus/Plus
Query 9 CACAC-ATCACAAATGCGGAGATTCGTGATTGGTCAAGCTAAAAATCTCATAGATCAGAG 67
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 129 CACACAATCACAAATGCGGAGATTCGTGATTGGCCAAGCTAAAAATCTCATAGATCAGAG 188
Query 68 TCGTCGTCGTCAACAT-ATTCATCACAAAAATCTCAGCTttctctctcttcttcctcctt 126
|||||||||||||| | | |||||||||||||||||||||| |||||||| |||||||||
Sbjct 189 TCGTCGTCGTCAACTTCA-TCATCACAAAAATCTCAGCTTTGTCTCTCTTATTCCTCCTT 247
Query 127 tttctgctccttccgattcttcatcgcgccacttg---tcttcttcttcttcggagatgt 183
||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct 248 TTTCTGCTCCTTCCGATTCTTCATCGCGCCACTTGTCTTCTTCTTCTTCTTCCGATATGT 307
Query 184 ctgcttctgattcctcttcctctcttcCCGTTACTCTTGACTCCATCAATCCCAAGGTTA 243
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 308 CTGCTTCTGATTCCTCTTCCTCTCTTCCCGTTACTCTTGACACCATCAACCCCAAGGTTA 367
Query 244 TCAAATGTGAGTATGCTGTCCGTGGAGAAATTGTCAACATTGCTCAGAGGTTGCAAGAAG 303
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 368 TCAAATGTGAGTATGCTGTCCGTGGAGAAATTGTCAACATTGCTCAGAAATTGCAAGAAG 427
Query 304 ATTTGAAGACTAACAAGGATGCTTATCCCTTTGATGAGATAATCTACTGTAATATCGGGA 363
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 428 ATTTGAAGACTAACAAGGACGCTTATCCCTTTGATGAGATTATCTACTGTAATATCGGGA 487
Query 364 ATCCTCAATCTCTTGGTCAACAGCCTATAACATTCTTCAGAGAGGTTCTTGCTTTATGTT 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 ATCCTCAATCTCTTGGTCAACAGCCTATAACATTCTTCAGAGAGGTTCTTGCTTTATGTT 547
Query 424 CCCACACAGCCCTGTTGGACGAGAGTGCAACACACGGTTTGTTCAGTTCTGATTCAATTG 483
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 548 CCTACACAGCCCTGTTGGATGAGAGTGCAACACACGGTTTGTTCAGTTCTGATTCGATTG 607
Query 484 AGCGTGCTTGGAAGATTCTGGACCAAATTCCCGGGAAAGCGACTGGTGCTTACAGCCACA 543
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 608 AGCGTGCTTGGAAGATTCTGGACCAAATTCCCGGGAGAGCGACTGGTGCTTACAGCCACA 667
Query 544 GCCAGGGTATCAAGGGGTTACGTGATGCAATTGCTGCTGGAATCGAAGCCCGTGATGGTT 603
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 668 GCCAGGGTATCAAGGGGTTACGTGATGCAATTGCTGATGGAATCGAAGCCCGTGATGGTT 727
Query 604 TCCCTGCTGATCCTAATGATATATTCATGACAGATGGTGCAAGCCCAGGGGTTCATATGA 663
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 728 TCCCTGCTGATCCTAATGATATATTCATGACAGATGGTGCAAGTCCAGGGGTTCATATGA 787
Query 664 TGATGCAACTTCTCATAACTTCAGAGAAAGATGGAATCCTTTGCCCTATTCCTCAGTACC 723
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 788 TGATGCAACTTCTCATAACTTCAGAGAAAGATGGAATCCTTTGTCCTATTCCTCAGTATC 847
Query 724 CATTGTACTCAGCTTCAATTGCCCTTCACGGTGGAACTTTGGTTCCATACTACCTTGATG 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 CATTGTACTCAGCTTCAATTGCCCTTCACGGTGGAACTTTGGTTCCATACTACCTTGATG 907
Query 784 AAGCATCAGGATGGGGTCTTGAAATATCTGAGCTAAAGAAGCAACTTGAAGATGCTAGGT 843
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 908 AAGCATCAGGATGGGGTCTTGAAATATCTGAGCTGAAGAAACAACTTGAAGATGCTAGGT 967
Query 844 CAAAGGGGATCACTGTGAGAGCTTTGGCTGTCATTAACCCTGGAAACCCGACAGGGCAGG 903
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 CAAAGGGCATCACTGTGAGAGCTTTGGCTGTCATTAACCCTGGAAACCCGACAGGGCAGG 1027
Query 904 TTCTTGCGGAAGAAAACCAGCGTGACATTGTTAATTTCTGCAAGCAAGAGGGTTTAGTTC 963
||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 1028 TTCTTTCGGAAGAAAACCAGCGTGACGTTGTTAAGTTCTGCAAGCAAGAGGGTTTAGTTC 1087
Query 964 TTTTAGCAGACGAGGTTTATCAAGAAAATGTGTATGTCCCTGACAAAAAGTTCCATTCCT 1023
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1088 TTTTAGCAGACGAGGTTTATCAAGAGAATGTCTATGTCCCTGACAAAAAGTTCCATTCCT 1147
Query 1024 TCAAGAAAGTAGCCCGCTCTATGGGCTACGGTGAGAAGGATCTTGCCTTAGTCTCTTTCC 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 TCAAGAAAGTAGCCCGCTCTATGGGCTACGGTGAGAAGGATCTTGCCTTAGTCTCTTTCC 1207
Query 1084 AATCTGTCTCCAAAGGTTACTATGGAGAGTGTGGGAAAAGAGGTGGTTACATGGAGGTTA 1143
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1208 AATCTGTCTCCAAAGGGTACTATGGAGAGTGTGGGAAAAGAGGTGGTTACATGGAGGTTA 1267
Query 1144 CTGGATTCACTTCTGATGTAAGAGAGCAGATATACAAAATGGCTTCTGTGAATCTTTGTT 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1268 CTGGATTCACTTCTGATGTAAGAGAGCAGATATACAAAATGGCTTCTGTGAATCTTTGTT 1327
Query 1204 CCAACATCTCTGGTCAAATTCTTGCTAGCCTCATCATGAGCCCACCCAAGCCTGGTGACG 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1328 CCAACATCTCTGGTCAAATTCTTGCTAGCCTCATCATGAGCCCACCCAAGCCTGGTGACG 1387
Query 1264 ACTCCTACGAATCATACATAGCAGAGAAGGATGGAATTCTCTCATCTTTAGCAAGACGTG 1323
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1388 ACTCCTATGAATCATACATAGCAGAGAAGGATGGAATTCTCTCATCTTTGGCAAGACGTG 1447
Query 1324 CGAAGACTCTTGAAGAGGCGCTGAACAAGCTAGAGGGTGTTACATGCAATAGAGCGGAAG 1383
| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1448 CAAAGACTCTTGAAGAGGCTCTGAACAAGCTAGAGGGAGTTACATGCAATAGAGCAGAAG 1507
Query 1384 GAGCTATGTATCTATTCCCCTGCCTTCACCTTCCACAAAAGGCGATTGCAGCTGCAGAGG 1443
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1508 GAGCTATGTATCTATTCCCTTGCCTTCACCTTCCACAAAAGGCAATTGCAGCTGCTGAGG 1567
Query 1444 CGGAAAAGACAGCACCAGACAATTTCTACTGCAAACGCCTTCTAAAAGCTACTGGAATAG 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1568 CGGAAAAGACAGCACCAGACAATTTCTACTGCAAACGCCTTCTAAAAGCTACTGGAATAG 1627
Query 1504 TCGTAGTCCCTGGTTCTGGCTTTAGACAGGTACCTGGAACATGGCATTTCAGGTGCACTA 1563
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1628 TCGTTGTCCCTGGTTCTGGCTTTAGACAGGTACCTGGAACATGGCATTTCAGGTGCACTA 1687
Query 1564 TACTTCCCCAAGAGGATAAGATTCCAGCGATTGTTGATCGTCTAACTGCATTCCACGAGA 1623
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1688 TACTTCCCCAAGAGGATAAGATTCCAGCGATTGTTGATCGTCTAACTGCGTTCCACCAGA 1747
Query 1624 GCTTCATGGACGAGTTCCGCGACTAAACATTGTGTTTTCAAGATC 1668
|||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1748 GCTTCATGGACGAGTTCCGCGACTAAGCATTCTGTTTTCAAGATC 1792
> AT1G72330.3 | Symbols: ALAAT2 | alanine aminotransferase 2 |
chr1:27233475-27236789 FORWARD LENGTH=2042
Length=2042
Score = 1099 bits (595), Expect = 0.0
Identities = 873/1007 (87%), Gaps = 20/1007 (2%)
Strand=Plus/Plus
Query 654 GTTCATATGATGATGCAACTTCTCAT-AACTTCAGAGAAAGATGGAATCCTTTGCCCTAT 712
||||| |||||||||||||||||| | | | |||||||||||||| || |||| ||| ||
Sbjct 829 GTTCACATGATGATGCAACTTCTCTTGAGC-TCAGAGAAAGATGGTATTCTTTCCCCGAT 887
Query 713 TCCTCAGTACCCATTGTACTCAGCTTCAATTGCCCTTCACGGTGGAACTTTGGTTCCATA 772
||||||||| ||||||||||| ||||||||||||||||| |||||| |||||||||| ||
Sbjct 888 TCCTCAGTATCCATTGTACTCGGCTTCAATTGCCCTTCATGGTGGATCTTTGGTTCCGTA 947
Query 773 CTACCTTGATGAAGCATCAGGATGGGGTCTTGAAATATCTGAGCTAAAGAAGCAACTTGA 832
||| |||||||||||| |||||||||| || ||||||||||| || ||||||||||| ||
Sbjct 948 CTATCTTGATGAAGCAACAGGATGGGGACTGGAAATATCTGACCTTAAGAAGCAACTAGA 1007
Query 833 AGATGCTAGGTCAAAGGGGATCACTGTGAGAGCTTTGGCTGTCATTAACCCTGGAAACCC 892
|| |||||||| ||||| ||| |||| || || |||| |||||| ||||| || |||||
Sbjct 1008 GGAAGCTAGGTCCAAGGGCATCTCTGTAAGGGCCTTGGTTGTCATAAACCCCGGTAACCC 1067
Query 893 GACAGGGCAGGTTCTTGCGGAAGAAAACCAGCGTGACATTGTTAATTTCTGCAAGCAAGA 952
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 AACTGGGCAGGTTCTTGCGGAAGAAAACCAGCGTGACATTGTTAATTTCTGCAAGCAAGA 1127
Query 953 GGGTTTAGTTCTTTTAGCAGACGAGGTTTATCAAGAAAATGTGTATGTCCCTGACAAAAA 1012
|||||| ||||||||||| || || || || ||||||||||| || ||||||||||||||
Sbjct 1128 GGGTTTGGTTCTTTTAGCTGATGAAGTCTACCAAGAAAATGTTTACGTCCCTGACAAAAA 1187
Query 1013 GTTCCATTCCTTCAAGAAAGTAGCCCGCTCTATGGGCTACGGTGAGAAGGATCT-TGCCT 1071
||||||||| ||||||||||| || || ||| ||||||| || || || ||| | | | |
Sbjct 1188 GTTCCATTCTTTCAAGAAAGTGGCTCGGTCTTTGGGCTATGGAGAAAAAGATATCT-CGT 1246
Query 1072 TAGTCTCTTTCCAATCTGTCTCCAAAGGTTACTATGGAGAGTGTGGGAAAAGAGGTGGTT 1131
||||||| |||||||| ||||||||||| || |||||||| ||||| |||||||| ||||
Sbjct 1247 TAGTCTCGTTCCAATCAGTCTCCAAAGGATATTATGGAGAATGTGGAAAAAGAGGAGGTT 1306
Query 1132 ACATGGAGGTTACTGGATTCACTTCTGATGTAAGAGAGCAGATATACAAAATGGCTTCTG 1191
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1307 ACATGGAGGTTACTGGATTCACTTCTGATGTAAGAGAACAGATATACAAAATGGCTTCTG 1366
Query 1192 TGAATCTTTGTTCCAACATCTCTGGTCAAATTCTTGCTAGCCTCATCATGAGCCCACCCA 1251
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1367 TGAATCTTTGTTCTAACATCTCTGGTCAAATTCTTGCTAGCCTTGTCATGAGCCCACCCA 1426
Query 1252 AGCCTGGTGACGACTCCTACGAATCATACATAGCAGAGAAG-GATGGAATTCTCTCATCT 1310
|||||||||| ||||| || || |||||||| ||||| ||| |||||||||||||||||
Sbjct 1427 AGCCTGGTGATGACTCATATGACTCATACATGGCAGA-AAGAGATGGAATTCTCTCATCC 1485
Query 1311 TTAGC-AAGACGTGCGAAGACTCTTG-AAGAGGCGCTGAACAAGCT-AGAGGGTGTTACA 1367
| || || |||||| |||||| ||| |||| || || |||| | | ||| |||||||||
Sbjct 1486 ATGGCTAA-ACGTGCAAAGACT-TTGGAAGACGCTCTCAACA-GTTTAGAAGGTGTTACA 1542
Query 1368 TGCAATAGAGCGGAAGGAGCTATGTATCTATTCCC-CTGCCTTCACCTTCCACAAAAGGC 1426
|| || ||||| |||||||| |||||||| ||||| | | || ||||||| ||||||||
Sbjct 1543 TGTAACAGAGCCGAAGGAGCAATGTATCTCTTCCCGC-GAATTAACCTTCCTCAAAAGGC 1601
Query 1427 GATTGCAGCTGCAGAGGCGGAAAAGACAGCACCAGACAATTTCTACTGCAAACGCCTTCT 1486
|| | |||||| ||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct 1602 TATCGAAGCTGCTGAGGCTGAAAAAACTGCACCAGATGCGTTCTACTGCAAACGCCTTCT 1661
Query 1487 AAAAGCTACTGGAATAGTCGTAGTCCCTGGTTCTGGCTTTAGACAGGTACCTGGAACATG 1546
|| |||||||| |||| ||||||||||||||||||||| ||||||| |||||||||||
Sbjct 1662 CAATGCTACTGGTGTAGTTGTAGTCCCTGGTTCTGGCTTTGGACAGGTTCCTGGAACATG 1721
Query 1547 GCA-TTTCAGGTGCACTATACTTCCCCAAGAGGATAAGATTCCAGCGATTGTTGA-TCGT 1604
||| ||| || ||||| |||||||| ||||| || |||||||||||||| || || ||||
Sbjct 1722 GCACTTT-AGATGCACAATACTTCCACAAGAAGACAAGATTCCAGCGATAGT-GAATCGT 1779
Query 1605 CTAACTGCA-TTCCACGAGAGCTTCATGGACGAGTTCCGCGACTAAA 1650
|| || | | |||||| ||||||||||||||||||||||| ||||||
Sbjct 1780 CTGACAG-AGTTCCACAAGAGCTTCATGGACGAGTTCCGCAACTAAA 1825
Score = 592 bits (320), Expect = 5e-168
Identities = 544/650 (84%), Gaps = 24/650 (4%)
Strand=Plus/Plus
Query 15 TCACAAATGCGGAGATTCGTGATTGGTCAAGCTAAAAATCTCATAGATCAGAGTCGTCGT 74
||||| |||||||||||| ||||| ||||||||| |||| | || | | || ||||
Sbjct 157 TCACAGATGCGGAGATTCTTGATTAACCAAGCTAAAGGTCTCGTCGA-C-CATTC-TCGT 213
Query 75 CGTCAACATATTCATCACAAAAATCTC-AGCTttctctctcttcttcctcctttttc-tg 132
||||||| | ||| ||||||| || | ||||||||||||| || ||| | | | ||
Sbjct 214 CGTCAAC--A-TCACCACAAAAGTC-CAAGCTTTCTCTCTCCTCAACCT-CGTCCCCTTG 268
Query 133 ctccttc-cgattcttcatcgcgccac-ttgtc-t-tcttcttcttcggagatgtctgct 188
|| |||| | | || | || | | | || || | |||||| |||||||||||||||||
Sbjct 269 CTTCTTCTC-CTCCTGC-TC-TGTCTCGTT-TCTTCTCTTCTACTTCGGAGATGTCTGCT 324
Query 189 tctgattcctcttcctctcttcCCGTTACTCTTGACTCCATCAATCCCAAGGTTATCAAA 248
||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 325 TCTGATTCCACTTCTTCTCTTCCCGTTACTCTTGACTCCATCAATCCCAAGGTTCTGAAA 384
Query 249 TGTGAGTATGCTGTCCGTGGAGAAATTGTCAACATTGCTCAGAGGTTGCAAGAAGATTTG 308
|||||||||||||| || ||||||||||||||||||||||||| ||| |||||||| |||
Sbjct 385 TGTGAGTATGCTGTTCGAGGAGAAATTGTCAACATTGCTCAGAAGTTACAAGAAGACTTG 444
Query 309 AAGACTAACAAGGATGCTTATCCCTTTGATGAGATAATCTACTGTAATATCGGGAATCCT 368
|||||||| |||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct 445 AAGACTAATAAGGATGCTTATCCCTTTGATGAGATAATCTATTGCAACATTGGGAATCCT 504
Query 369 CAATCTCTTGGTCAACAGCCTATAACA-TTCTTCAGAGAGGTTCTTGCTTTATGTTCCCA 427
|||||||||||||| | |||||||| | |||||| | |||||||| || || ||| |||
Sbjct 505 CAATCTCTTGGTCAGCTGCCTATAA-AGTTCTTCCGTGAGGTTCTCGCATTGTGTGACCA 563
Query 428 CACA-GCCCTGTTGGACGAGAGTGCAACACACGGTTTGTTCAGTTCTGATTCAATTGAGC 486
| || | | | ||||| ||| || ||| || |||||||||||| | ||||||||||| |
Sbjct 564 CGCAAGTCTT-TTGGATGAGTCTGAAACCCATGGTTTGTTCAGTACCGATTCAATTGACC 622
Query 487 GTGCTTGGAAGATTCTGGACCAAATTCCCGGGAA-AGCGACTGGTGCTTACAGCCACAGC 545
| || |||| |||| ||||||| |||||||| || ||| ||||| |||||||| || |||
Sbjct 623 GAGCATGGAGGATTTTGGACCATATTCCCGG-AAGAGCAACTGGGGCTTACAGTCATAGC 681
Query 546 CAGGGTATCAAGGGGTTACGTGATGCAATTGCTGCTGGAATCGAAGCCCGTGATGGTTTC 605
|||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||||||
Sbjct 682 CAGGGTATCAAGGGTTTACGTGATGTAATTGCAGCTGGAATCGAAGCACGTGATGGTTTC 741
Query 606 CCTGCTGATCCTAATGATATATTCATGACAGATGGTGCAAGCCCAGGGGT 655
||||||||||| |||||||| ||| |||| ||||||||||| |||| |||
Sbjct 742 CCTGCTGATCCAAATGATATTTTCTTGACTGATGGTGCAAGTCCAGCGGT 791
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82579896525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5