BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920654
Length=1106
Score E
Sequences producing significant alignments: (Bits) Value
AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-... 1862 0.0
AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3... 1273 0.0
> AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-799176
FORWARD LENGTH=1348
Length=1348
Score = 1862 bits (1008), Expect = 0.0
Identities = 1076/1108 (97%), Gaps = 7/1108 (1%)
Strand=Plus/Plus
Query 1 ATCCCAGATCTGAATCTAAACCTCTCAAAATCTC--TTCTCATCATCATGGCTTCTTCTT 58
||||||||||||||||| || | || ||| ||| | |||||||||||||||||||||
Sbjct 90 ATCCCAGATCTGAATCTCAA-C-CT--AAACCTCAGAT-TCATCATCATGGCTTCTTCTT 144
Query 59 CTAACTACGATGGAATCCTTCTCGGAATGGGTAACCCACTCCTCGATATCTCTGCCGTCG 118
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 145 CTAACTACGATGGAATCCTTCTCGGTATGGGTAACCCACTCCTCGATATCTCTGCCGTCG 204
Query 119 TCGACGACGAATTTCTCACCAAATACGACATCAAGTTGAACAATGCGATTCTCGCTGAGG 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 205 TCGACGACGAATTTCTCACCAAATACGACATCAAGTTGAACAATGCGATTCTCGCGGAAG 264
Query 179 ACAAACATTTGCCCATGTATGATGAGATGAGTAGCAAGTTCAATGTTGAATACATTGCCG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 265 ACAAACATTTGCCCATGTATGATGAGATGAGTAGCAAGTTCAATGTTGAATACATTGCCG 324
Query 239 GAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAGTGGATGCTTCAAATTCCTGGGGCAA 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 GAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAGTGGATGCTTCAAATTCCTGGGGCAA 384
Query 299 CCAGTTACATGGGATCCATTGGAAAGGACAAATATGGAGAGGCCATGAAGAAGGATGCTA 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 385 CCAGTTACATGGGATCCATTGGAAAGGACAAATATGGAGAGGCCATGAAGAAGGATGCTA 444
Query 359 CAGCAGCTGGTGTCAATGTTCACTATTATGAAGATGAGTCGGCACCTACTGGAACTTGCG 418
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 445 CAGCAGCTGGTGTTAATGTTCACTATTATGAAGATGAGTCGGCACCTACTGGAACTTGTG 504
Query 419 GTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATTGCGAATCTTTCAGCTGCAAACTGCT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 505 GTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATTGCGAATCTTTCAGCTGCAAACTGCT 564
Query 479 ACAAGGTTGATCACCTTAAGAAGCCTGAAAACTGGGCATTGGTTGAGAAGGCCAAGTTCT 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 ACAAGGTTGATCACCTTAAGAAGCCTGAAAACTGGGCATTGGTTGAGAAGGCCAAGTTCT 624
Query 539 ATTACATTGCTGGATTCTTCCTCACAGTATCGCCTGAATCCATTCAGTTGGTATCTGAGC 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 ACTACATTGCTGGATTCTTCCTCACAGTATCGCCTGAATCCATTCAGTTGGTATCTGAGC 684
Query 599 ATGCTGCTGCAAACAACAAGGTGTTCACAATGAACCTTTCTGCTCCATTCATTTGTGAAT 658
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 685 ACGCTGCTGCAAACAACAAGGTGTTCACAATGAACCTTTCTGCTCCATTCATCTGTGAAT 744
Query 659 TCTTCAAAGATGTGCAGGAGAAGTTCTTGCCATACATGGACTTCGTTTTCGGCAATGAAA 718
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 745 TCTTCAAAGATGTGCAGGAGAAGTTCTTGCCATACATGGACTTCGTTTTCGGCAATGAGA 804
Query 719 CAGAAGCAAGAACCTTCTCCAGGGTTCACGGCTGGGAGACTGAAGATGTCGAACAAATAG 778
|||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 805 CAGAGGCAAGAACCTTCTCTAGGGTTCATGGCTGGGAGACTGAAGATGTCGAACAAATAG 864
Query 779 CCATCAAGATTTCACAGCTTCCCAAGGCCACGGGAACATACAAGAGGACCACTGTGATAA 838
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 865 CCATCAAGATTTCACAGCTTCCCAAGGCCACAGGAACATACAAGAGGACCACTGTGATTA 924
Query 839 CACAGGGCGCAGATCCAGTGGTTGTTGCTGAAGATGGAAAGGTGAAGAAATATCCAGTCA 898
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 CACAGGGCGCTGATCCAGTGGTTGTTGCTGAAGATGGAAAGGTGAAGAAATATCCAGTCA 984
Query 899 TCCCTCTCCCAAAAGAGAAGCTGGTTGACACCAACGGTGCAGGTGATGCATTTGTGGGAG 958
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 985 TCCCTCTCCCAAAGGAGAAGCTGGTTGACACCAACGGTGCAGGTGATGCATTTGTGGGAG 1044
Query 959 GATTCATGTCACAGTTGGTGAAAGAGAAATCGATTGAGGAATGCGTGAAAGCTGGATGCT 1018
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1045 GATTTATGTCACAGTTGGTGAAAGAGAAATCGATTGAGGAATGCGTGAAGGCTGGATGCT 1104
Query 1019 ATGCGTCGAACGTGGTGATCCAAAGATCTGGCTGCACTTACCCTGAGAAGCCCGACTTTA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ATGCGTCGAACGTGGTGATCCAAAGATCTGGCTGCACTTACCCTGAGAAGCCCGACTTTA 1164
Query 1079 ACTAAACTATTGGGTCATCCTCAGCTTT 1106
||||||| ||||||| | |||||| |||
Sbjct 1165 ACTAAACAATTGGGTTACCCTCAGTTTT 1192
> AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3:3011990-3014944
FORWARD LENGTH=1487
Length=1487
Score = 1273 bits (689), Expect = 0.0
Identities = 942/1062 (89%), Gaps = 25/1062 (2%)
Strand=Plus/Plus
Query 38 TCATCAT-CATGGCTTCTTCTTCTAACTACGATGGAATCCTTCTCGGAATGGGTAACCCA 96
||||||| ||||||||| | ||| | | ||||||||||||| | |||||||| ||||||
Sbjct 124 TCATCATCCATGGCTTC--C-TCTGATTTCGATGGAATCCTTTTGGGAATGGGAAACCCA 180
Query 97 CTCCTCGATATCTCTGCCGTCGTCGA-CGACGAATTTCTC-ACCAAATACGACATCAAGT 154
|||||||| |||||||||||||||| | || | |||||| | ||||||||||||||| |
Sbjct 181 CTCCTCGACGTCTCTGCCGTCGTCGACCAAC-AGTTTCTCGA-CAAATACGACATCAAAT 238
Query 155 TGAACAATGCGATTCTCGCTGAGGACAAACATTTGCCCATGTATGATGAGATGAG-TAGC 213
||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 239 TGAACAATGCGATTCTCGCAGAGGACAAACATTTGCCCATGTACGATGAAATGAGCCAG- 297
Query 214 AAGTTCAATGTTGAATACATTGCCGGAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAG 273
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 298 AAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAAAGTGGCCCAG 357
Query 274 TGGATGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATAT 333
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TGGATGCTTCAAGTTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATAC 417
Query 334 GGAGAGGCCATGAAGAAGGATGCTACAGCAGCTGGTGTCAATGTTCACTATTATGAAGAT 393
|||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct 418 GGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCTATGTCCACTATTACGAAGAT 477
Query 394 GAGTCGGCACCTACTGGAACTTGCGGTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATT 453
||| | ||||||| ||||||||||||||||||||| ||||||||||||| || || |||
Sbjct 478 GAGGCAACACCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAGATCGCTCATT 537
Query 454 GCGAATCTTTCAGCTGCAAACTGCTACAAGGTTGATCACCTT-AAGAAGCCTGAAAACTG 512
|| |||||||| ||||| || |||||||||||||| ||| || ||||||||||| |||||
Sbjct 538 GCCAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACAC-TTGAAGAAGCCTGAGAACTG 596
Query 513 GGCAT-TGGTTGAGAAGGCCAAGTTCTATTACATTGCTGGATTCTTCCTCACAGTATCGC 571
||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 597 GGC-TCTGGTTGAGAAGGCCAAGTTTTATTACATTGCTGGATTCTTCCTCACGGTATCAC 655
Query 572 CTGAATCCATTCAGTTGGTATC-TGAGCATGCTGCTGCAAACAACAAGGTGTTCACAATG 630
| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||
Sbjct 656 CAGAATCCATTCAGTTGGTA-CGTGAACATGCTGCTGCAAACAACAAGGTGTTCACGATG 714
Query 631 AACCTTTCTGCTCCATTCATTTGTGAATTCTTCAAAGATGTGCAGGAGAAGTTCTTGCCA 690
|||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||
Sbjct 715 AACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTGCCTGCCG 774
Query 691 TACATGGACT-TCGTTTTCGGCAATGAAACAGAAGCAAGAACCTTCTCCAGGGTTCACGG 749
|||||||||| | |||| |||||||| || || ||||||||||||||||||||||||||
Sbjct 775 TACATGGACTATATTTTT-GGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGTTCACGG 833
Query 750 CTGGGAGACTGAAGATGTCGAACAAATAGCCATCAAGATTTCACAGCTT-CCCAAGGCCA 808
|||||||||||| ||||| || ||||||||||||||||| || ||| || ||||| |||
Sbjct 834 CTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAG-TTACCCAAAGCCT 892
Query 809 CGGGAACATACAAGAGGACCACTGTGATAACACAGGGCGCAGATCCAGTGGTTGTTGCTG 868
| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||
Sbjct 893 CTGGAACATACAAGAGGACTACTGTGATTACACAAGGCGCAGATCCTGTGGTTGTCGCTG 952
Query 869 AAGATGGAAAGGTGAAGAAATATCCAGTCATCCCTCTCCCAAAAGAGAAGCTGGTTGACA 928
| |||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||
Sbjct 953 AGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAAGAGAAGCTTGTTGACA 1012
Query 929 CCAACGGTGCAGGTGATGCATTTGTGGGAGGATT-CATGTCACAGTTGGTGAAAGAGAAA 987
||||||||||||||||||||||||||||||| || | |||| ||| ||||| | | ||||
Sbjct 1013 CCAACGGTGCAGGTGATGCATTTGTGGGAGGGTTTC-TGTCCCAGCTGGTGCACG-GAAA 1070
Query 988 TCG-ATTGAGGAATGCGTGAAAGCTGGATGCTATGCGTCGAACGTGGTGATCCAAAGATC 1046
| ||||| || || |||| || |||||||| ||||| ||||| |||||||| || ||
Sbjct 1071 GGGGATTGAAGAGTGTGTGAGGGCAGGATGCTACGCGTCAAACGTAGTGATCCAGAGGTC 1130
Query 1047 TGGCTGCACTTACCCTGAGAAGCCCGACTTTAACTAAA-CTA 1087
||| ||||||||||||||||| || ||||| ||||||| |||
Sbjct 1131 TGGTTGCACTTACCCTGAGAAACCAGACTTCAACTAAATCTA 1172
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54216588600
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5