BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920663
Length=5594
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17450.2 | Symbols: | B-block binding subunit of TFIIIC | c... 8829 0.0
AT1G58766.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 1919 0.0
AT1G59077.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 1914 0.0
AT1G59453.1 | Symbols: | B-block binding subunit of TFIIIC | c... 1914 0.0
> AT1G17450.2 | Symbols: | B-block binding subunit of TFIIIC |
chr1:5988280-5996785 REVERSE LENGTH=5926
Length=5926
Score = 8829 bits (4781), Expect = 0.0
Identities = 5349/5616 (95%), Gaps = 68/5616 (1%)
Strand=Plus/Plus
Query 1 TACCTTTTGGATGATGAGAAATGGATTCGATTGTATGCACAACACTGGAGGAAATCTGTT 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 73 TACCTTTTGGATGATGAGAAATGGATTCGATTGTATGCACAGCACTGGAGGAAATCTGTT 132
Query 61 GTCAGGGAAATACAGGGAtccctctcgtttctctctggtcaaggctctctcctcctcctc 120
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 133 GTCAAGGAAATACAGGGATCCCACTCGTTTCTCTCTGGTCAAGGCTCTCTCCTCCTCCTC 192
Query 121 tttctccttccGTCAAGGCTCATGTCTGGAGAAATCTTCTCGCCGTCCCTCAGCTCCAGT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 TTTCTCCTTCCGTCAAGGCTCATGTCTGGAGAAATCTTCTCGCCGTCCCTCAGCTCCAGT 252
Query 181 TCAAGGCGAAGAACACTGTGTACGAACCGTCTCATGCTTCCATTCAACAGCTGGAAGAAG 240
|||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |
Sbjct 253 TCAAGGCGAAAAACACTGTGTACGAACCATCTGATGCTTCGATTCAACAGCTGGAAGAGG 312
Query 241 CATTAAGACTAGATTTGAGAATCGTCGCAAATGAGAAGCTCCGAGGTAACTTCGTGGGCT 300
|| ||||||| |||||||| ||| |||| |||||||||||||||||||||||||| ||||
Sbjct 313 CACTAAGACTCGATTTGAGGATCTTCGCGAATGAGAAGCTCCGAGGTAACTTCGTTGGCT 372
Query 301 TGTACGATGCTCAGTCCAATAACACGACTATTTCCGCTATTCAGCGTCGTGTTCTTGAGC 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 373 TGTACGATGCTCAGTCCAATAACACGACTATTTCCGCTATTCAGCGTCGCGTTCTCGAGC 432
Query 361 GGCTTGCTGTTGCTCGAGCCAATGGAGTTGCACAAAATCTGCTTGCTAAAGAGTTTGGTA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 GGCTTGCTGTTGCTCGAGCCAATGGAGTTGCACAAAATCTGCTTGCTAAAGAGTTTGGTA 492
Query 421 TCGAAGGTAGGAACTTCTTCTATATTGTGAAGCACCTTGAGTCTCGAGGTTTAGTTGTTA 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 TCGAAGGTAGAAACTTCTTCTATATTGTGAAGCACCTTGAGTCTCGAGGTTTAGTTGTTA 552
Query 481 AGCAACCAGCGATTGTGAGAACAAAGGAAGTTGATGGCGAAGGGGATTCCAAAACCACTT 540
| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 553 AACAACCAGCGATAGTGAGAACAAAGGAAGTTGATGGTGAAGGGGATTCCAAAACCACCT 612
Query 541 CATGCAATAGCACCAACATGATTTACTTAAGTCGTTACGCCAAGCCTTTGGGTTCTCAGC 600
|||||| ||||||||| ||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 613 CATGCATTAGCACCAATATGATATATTTAAGTCGTTACGCCAAGCCTTTGGGTTCCCAGC 672
Query 601 AGAGGTTTGAAATTTGCAAAGAGGACTCTTTGTCGGAAACACCAATGATGGAGCATGAGC 660
|||| ||||| ||||||||||||||||| || | || ||||||| |||
Sbjct 673 AGAGATTTGAGATTTGCAAAGAGGACTC-TT-T-----------AT--TGGAGCAAGAGG 717
Query 661 CTACTCCAGCCGGAGATAGTCTACTATCTGAAAATACAAAAGAGGATACGCTCATTAAAG 720
||||||| |||||||||||| ||| ||| |||| ||||||||||||||||||||||||||
Sbjct 718 CTACTCCCGCCGGAGATAGTTTACAATCAGAAAGTACAAAAGAGGATACGCTCATTAAAG 777
Query 721 ATTTTCTACCAGCAATGAAGGCAATTTGTGATAAGCTTGAAGAAGCTAACGAGAAGGTTC 780
||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||
Sbjct 778 ATTTTCTACCAGCAATGCAGGCAATTTGTGATAAGCTTGAAGAAACTAATGAGAAGGTTC 837
Query 781 TAGTCGTCTCGGACATTAAGCAAGACCTTGGTTATTTGGGATCACATTCAAGGCATAGAG 840
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 838 TAGTCGTCTCGGACATTAAGCAAGACCTCGGTTATCTGGGATCACATTCAAGGCATAGAG 897
Query 841 CTTGGAGAAGTGTTTGTCGCCGGTTGACAGATTCTCATGTAGTAGAGGAGTTTGATGCTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CTTGGAGAAGTGTTTGTCGCCGGTTGACAGATTCTCATGTAGTAGAGGAGTTTGATGCTG 957
Query 901 TGGTGAACAATAAGGTTGAACGATGCCTCCGTTTGTTAAAAAGATTTTCAGAAAAAGATT 960
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 958 TGGTGAACAATAAGGTTGAACGATGCCTCCGTTTGTTAAAAAGATTTTCAGCAAAAGATT 1017
Query 961 TTAATAACTACTCTGGGAAAAAACAACTCCTAAAATTCGGAAGGAGTATTCAAAGAACAG 1020
|||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1018 TTAA---CTACTCTGGGAAAAAGCAACTCCTAAAATTCGGAAGGAGTATTCAAAAAACAG 1074
Query 1021 AACAAACTTTGGAGCTTCCAATAGATAATCAAATTTATGATATGGTTGATGCTGAAGGAT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 AACAAACTTTGGAGCTTCCAATAGATAATCAAATTTATGATATGGTTGATGCTGAAGGAT 1134
Query 1081 CGAAAGGCTTGGCTGTGATGGAGGTATGTGAAAGACTTGGAATTGACAAGAAGAAGAGCT 1140
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 CTAAAGGCTTGGCTGTGATGGAGGTATGTGAAAGACTTGGAATTGACAAGAAGAAGAGCT 1194
Query 1141 ACTCTCGGCTTTATAGTATATGTTTAAGAGTCGGGATGCATATACAGGCAGAAAGCCACA 1200
||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||||
Sbjct 1195 ACTCTCGGCTTTATAGTATTTGTTTAAAAGTCGGGATGCATTTACAGGCAGAAAGTCACA 1254
Query 1201 AGAAGACTAGAGTATTTCGTGTTTGGACTTCTGGTAATGCTGGGTCCGAGTGTTCTGATC 1260
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1255 AGAAGACTAGAGTATTTCGAGTTTGGACTTCTGGTAATGCTGGGTCCGAATGTTCTGATC 1314
Query 1261 TGTTTCCTGAGAAAGTTGAAAATCGTAGCTGGGAAAATAATGTATCGACTAATGATTTTG 1320
|||||||||||||| ||||||||||||||||||||| |||||| ||| |||||||||||
Sbjct 1315 GGTTTCCTGAGAAAGCTGAAAATCGTAGCTGGGAAAACAATGTACCGATTAATGATTTTG 1374
Query 1321 GCACACCTCATGATACTGGTGGATTGGCTCAGACCTCCATCGAACACAGTCTTGCAATTT 1380
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1375 GCACACCTCATGATACTGGTGGATTGACTCAGACCTCCATCGAACACAGTATTGCAATTT 1434
Query 1381 CTGATGCTGAATTTGCTACACCTGCAAGGTTAACTGATTCTGAAAACAATTCAGGAGTTC 1440
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 CTGATGCTGACTTTGCTACACCTGCAAGGTTAACTGATTCTGAAAACAATTCAGGAGTTC 1494
Query 1441 TCCACTTTGCTACACCTGGAAGGTTAACTGATTCTGAAAGCAATTCAGGAGTTCCTGATT 1500
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1495 TCCACTTTGCTACACCTGGAAGGCTAACTGATTCTGAAAGCAATTCAGGAGTTCCGGATT 1554
Query 1501 GTTCTCCATCTAATGCGAAAAGAAGAAATGTCCTTACACGCCGTAACTTACAAGAATCAT 1560
|||| |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1555 GTTCCCCATCTGATGCCAAAAGAAGACATGTCCTTACACGCCGTAACTTACAAGAATCAT 1614
Query 1561 TCCATGAGATCTGTGATAAGGTTGTTAATACTGCAATGGGGTCCCCTGATTTGGCTTTGT 1620
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1615 TCCATGAGATCTGTGATAAGGTTGTTGATACTGCAATGGGGTCCCCTGATTTGGCTTTGT 1674
Query 1621 CAGAAACGAACCATCTCGCTCTACCGAAGCCAGCTAAACCGAAGGTGCACCAACCTCAGC 1680
|||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 1675 CAGAAATGAACCATCTCGCTCCACCGAAGCCAGCTAAACCAAAGGTGCACCAACCTCAGC 1734
Query 1681 CGATTACTGTTGAAAACTCTCGAAGAGAGCGGAGAATACTTGAGCGCTTAAATGAGGAGA 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 CGATTACTGTTGAAAACTCTCGAAGAGAGCGGAGAATACTTGAGCGCTTAAATGAGGAGA 1794
Query 1741 AGTTTGTTGTAAGAGCCGAGCTACATAAATGGCTGCTCAGTCTTGAGAAGGACAGGAGCT 1800
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1795 AGTTTGTTGTAAGAGCCGAGCTACATAAATGGCTTCTCAGTCTTGAGAAGGACAGGAGCT 1854
Query 1801 CCAAAGTGGATAGGAAAACCATTGACAGAATTCTAAACAGGCTTCAAGAAGAAGGACTCT 1860
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1855 CCAAAGTGGATAGGAAAACCATTGACAGAATTCTAAATAGGCTTCAAGAAGAAGGACTCT 1914
Query 1861 GCAATTGCATGAACATTAGTGTCCCAAATGTTACTAATTGTGGTCGCAATCGTAGCTCTG 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 GCAATTGCATGAACATTAGTGTCCCAAATGTTACTAATTGTGGTCGCAATCGTAGCTCTG 1974
Query 1921 TGGTAGTTTTTCATCCATCTGTTCAAAGTTTGACTCGGGACATAGTTGGTGAAATTCATG 1980
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1975 TGGTAGTTTTTCATCCATCTGTTCAAAGTTTGACTCGAGACATAGTTGGTGAAATTCATG 2034
Query 1981 ATAGGATTAGGTCTTTTGAACTGGGACTCCGTGGCCAGAACTTATCGAAGAGGAAAAGCA 2040
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2035 ATAGGATTAGGTCTTTTGAACTGGGACTCCGTGGCCAGAACTTATCAAAGAGGAAAAGCA 2094
Query 2041 ACGAGCTAATTCCAATATTGAATGACGTTCAGAGAGGTCAAACAAATGTAGATTTGGATG 2100
|||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||
Sbjct 2095 ACGAGCTAATTCCAATATTGAATGACATTCAGAGAGGTCAAACGAATGTGGATTTGGATG 2154
Query 2101 CGCGTGCTAGCAAATCAGGAGCCATGCGAGCCAATGGGTTTGTGCTTGCAAAGATGGTTC 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 CGCGTGCTAGCAAATCAGGAGCCATGCGAGCCAATGGGTTTGTGCTTGCAAAGATGGTTC 2214
Query 2161 GTGTGAAGCTCCTACATTGTTTCCTTTGGGACTATTTTAGTTCTTTGCCTAGCTGGGACA 2220
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2215 GTGTGAAGCTCTTACATTGTTTCCTTTGGGACTATTTTAGTTCTTTGTCTAGCTGGGACA 2274
Query 2221 ATGCTTTTTCGTCTATACATGATCAGAAATTTGACAATTTGTTTGCACTTGAAGATGCTT 2280
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2275 ATGCCTTTTCGTCTATACATGATCAGAAATCTGACAATTTGTTTGCACTTGAAGATGCTT 2334
Query 2281 TTAAAGCCATGCCACTCGAACTATTTTTACAAGTTGTTGGATCTACTCAGAAAGCCGATG 2340
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2335 TTAAAGCCATGCCACTCGAACTGTTTTTACAAGTTGTTGGATCTACTCAGAAAGCTGATG 2394
Query 2341 ATATGATGAAGAAATGCAAACAGGTTATGCGTCTTTCTGAGCTTCCTGGCGAAGAGTATA 2400
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2395 ATATGATGAAGAAATGTAAACAGGTTATGCGTCTTTCTGAGCTTCCTGGTGAAGAGTATA 2454
Query 2401 AGCTTCTAATGGATACTCTTGCAACTGGGAGATTATCGATGCTTATTGATATCTTACGCC 2460
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2455 AGCTTCTAATGGACACTCTTGCAACTGGGAGATTATCGATGCTTATTGATATTTTACGTC 2514
Query 2461 GGTTGAAGTTGATTCAGATGGTAAGCAGTAGACTCAGACGCGATGAAATTGAGGAGAAGT 2520
| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2515 GCTTGAAGTTAATTCAGATGGTAAGTAGTAGACTCAGACGCGATGAAATTGAGGAGAAGT 2574
Query 2521 ATGCTAATCTAACCCATGCAATGGAGCTTAAGCCCTATATAGAGGAACCTGTGTTTGTTG 2580
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2575 ATGCTAATCTAACACATGCAATGGAGCTTAAGCCTTATATAGAGGAACCTGTGTTTGTTG 2634
Query 2581 CTGCTACATCCAATGTTATGTCTCTTGATTTTCGTCCACGTATTCGGCATGACTTTATTC 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2635 CTGCTACATCCAATGTTATGTCTCTTGATTTTCGTCCACGTATTCGGCATGACTTTATTC 2694
Query 2641 TATCAAATAGAGATGCTGTTGATGAATACTGGCTAACTTTAGAGTATTGCTATGCTGCTG 2700
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 2695 TATCAAATAGAGATGCTGTTGATGAATATTGGCTAACTTTAGAATATTGCTATGCTGCTG 2754
Query 2701 CCGATCATAGAGCTGCTAAGCTAGCATTTCCGGGATCTGTTGTTCAAGAGGTTTTTCGTT 2760
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2755 CCGATCACAGAGCTGCTAAGCTAGCATTTCCGGGATCTGTTGTTCAAGAGGTTTTTCGTT 2814
Query 2761 TCCGCTCTTGGGCCTCAGATCGTGTCATGACAACAGAACAGCGTGCTAAGCTCTTACAGC 2820
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 2815 TCCGCTCTTGGGCCTCAGATCGTGTCATGACAACGGAACAGCGTGCTAAGCTCTTAAAGC 2874
Query 2821 GCATTGCAATCGATGAGAAGGAAAAACTCTCATTCAAAGAATGTGAGAAGATTGCTAAGG 2880
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 2875 GCATTGCAATCGATGAGAAGGAAAAGCTCTCATTCAAAGAGTGTGAGAAGATTGCTAAGG 2934
Query 2881 ATCTGAACCTGACCTTAGAGCAGGTTATGCATGTCTATCATGCGAAGCATGGAAGACGCG 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2935 ATCTGAACCTGACCTTAGAGCAGGTTATGCATGTCTATCATGCGAAGCATGGAAGACGCG 2994
Query 2941 TGAAGTCCAAATCAAAAGATAAAAATTTTGCTATAGATAATAGCCCTTCTTCATCTTCCG 3000
|||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||||| |
Sbjct 2995 TGAAATCCAAATCAAAAGATAAACATTTAGCTATAGATAATAGCTCTTCTTCATCTTCTG 3054
Query 3001 GGAAAAGAAAAAGAGAAACTATCGTAAAGACTACAGGAGAAGGTGTCAGATCCATAATAG 3060
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3055 GGAAAAGAAAAAGAGGAACTCTCGTAAAGACTACAGGAGAAGGTGTCAGATCCATAATAG 3114
Query 3061 TAGATGAAGAAAAGGTTCTGAATTCAGATGCCATTAATGCCTCAAATAGTGAGAATTTTC 3120
|||| | |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||
Sbjct 3115 TAGACGGAGAAAAGGTTCTGAATTCCGATGCCATTGATGCCTCAAATAGTGAGAAGTTTC 3174
Query 3121 AAAATTCATTAGAAGAGGACCAAACCCCCATTCCGATGCATCAGGAGCATAATCTACAAG 3180
|||||||||||||||| | | | | | | | |||||||||||||||
Sbjct 3175 TAAATTCATTAGAAGAG--C-A--------T-C--A-G-----G-AGCATAATCTACAAG 3213
Query 3181 AAAATGCAGAGATAAGGGATCTTGCTGAAGATGAAGGCCAGTGTTCTTCTATTATCAACC 3240
||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 3214 AAAATTCAGAGATAAGGGATCTTACTGAAGATGAAGGCCAGTGCTCTTCTATTATCAACC 3273
Query 3241 AGTACGCAAGTTCAAAGACCACAGCAACTCCTTCACAAAGATTTTCGTGGACAGATGAGG 3300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3274 AGTACGCAAGTTCAAAGACCACATCAACTCCTTCACAAAGATTTTCGTGGACAGATGAGG 3333
Query 3301 CAGACAGGAAATTGTTGAGTCAATATGTTAGACACCGCGCAGCTCTTGGGGCGAAATTTC 3360
||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 3334 CAGACAGGAAACTGTTGAGTCAATATGTTAGACATCGTGCAGCTCTTGGGGCGAAATTTC 3393
Query 3361 ATGGAGTAATCTGGGCTTCAGTTCCAGAACTGCCTGCCCCACCTTTAGCTTGCAAGCGAC 3420
||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 3394 ATGGAGTGATGTGGGCTTCAGTTCCAGAACTGCCTGCCCCTCCTTTGGCTTGCAAGCGAC 3453
Query 3421 GGATTCAAATATTGATGAAGAATGATAAATTTCGGAAGGCGATCATGAGGCTTTGCAATC 3480
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3454 GGGTTCAAATATTGATGAAGAATGATAAATTTCGGAAGGCGATCATGAGTCTTTGCAATC 3513
Query 3481 TGCTCAGTGAGCGTTATGCAAGACATCTAGAGACGAAACAGAAGTGTTCACCCGAGAGCA 3540
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 3514 TGCTCAGTGAGCGTTATGCAAGACATCTGGAGACGAAACAGAAGTGTTTACCCGAGAGCA 3573
Query 3541 ACAGGTCACATGTTCTTGTTAGATATTTATCCCCGGCGATTGGCGGAACGGATTCTGGTT 3600
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3574 ACAAGTCACATGTTCTTGTTAGATATTTATCCCCGGCAATTGGCGGAACGGATTCTGGTT 3633
Query 3601 CTGTTGAGCATGGTAAAGATATATGTTTTGATGAAGAAAAATGGGATGACTTCAATGAAA 3660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3634 CTGTTGAGCAAGGTAAAGATATATGTTTTGATGAAGAAAAATGGGATGACTTCAATGAAA 3693
Query 3661 AGAGTATAAGTCAAGCCTTTAATGATGTTCTTGATCTCAAGAAGATGGCTAAACTGGTGG 3720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3694 AGAGTATAAGTCAAGCCTTTAATGATGTTCTTGAGCTCAAGAAGATGGCTAAACTGGTGG 3753
Query 3721 CCCCTAAACGGACGAAGCCTGGCTCTCGGGAATGGTCAAACAGAGATATAGTTGATGAGG 3780
||||||||||||| || | ||||||||||||||||||||||||||| |||||||||
Sbjct 3754 CCCCTAAACGGACAAAAAGT---TCTCGGGAATGGTCAAACAGAGATATAATTGATGAGG 3810
Query 3781 GGAGTGATATGGTTCCACCTGCGATTCACTCAGAGGACATTCAAAATGTGACTGTGGATC 3840
||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 3811 GGAGTGAAATGGTTCCACCTGCGATCCACTCAGAGGACATTCAAAATGTGTCTGTGGATC 3870
Query 3841 AAGTTAAAGATACAACTCGACGATCTGGACATTATCGTCTTCATCAAACTATTAAGCCTT 3900
|||||||||||||| ||||||||||||| ||||||||||||||||||||| | | |||||
Sbjct 3871 AAGTTAAAGATACATCTCGACGATCTGGTCATTATCGTCTTCATCAAACTGTCAGGCCTT 3930
Query 3901 TAGATGAAAAGGACAACGGTAGTATACAAGTACGGAAATCTCTGGCAGTTTCTACTGCTG 3960
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3931 TAGATGAAAAGGACAACGATAGTATACAAGTACGGAAATCTCTGGCAGTTTCTACTGCTG 3990
Query 3961 CAGAACTGTTAAAGCTTGTCTTTCTGAGCATGCCTACTGCACCTGGTATGCCAAATTTGC 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3991 CAGAACTGTTAAAGCTTGTCTTTCTGAGCATGCCTACTGCACCTGGTATGCCAAATTTGC 4050
Query 4021 TGGAAGATACCTTAAGACGTTATTCAGAGCGAGACCTCTTTACAGCCTATAGCTACCTCC 4080
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 4051 TGGAAGATACCTTACGACGTTATTCAGAGCGAGACCTCTTCACAGCCTATAGCTACCTCC 4110
Query 4081 GAGACAAAAAATTCCTGGTTGGTGGAAGTGGTGGACAGCCATTTGTGCTTTCTCAAAACT 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4111 GAGACAAAAAATTCCTGGTTGGTGGAAGTGGTGGACAGCCATTTGTGCTTTCTCAAAACT 4170
Query 4141 TCTTGCATAGTATTTCGAAGTCTCCATTCCCAGTTAATACTGGGACAAGAGCAGCCAAGT 4200
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 4171 TCTTGCACAGTATTTCAAAGTCTCCATTCCCAGTTAATACTGGGACAAGAGCAGCCAAGT 4230
Query 4201 TTTCCAGTTGGCTTCTCGAACATGAAAGAGACCTTATGGCTGGGGGAGTCGCTCTTACTT 4260
| |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 4231 TCTCCAGTTGGCTTTTCGAACATGAAAGAGACCTTATGGCTGGGGGTGTCACTCTTACTT 4290
Query 4261 CAGATTTGCAATGTGGCGATATTTTAAATTTCTTTTCATTGGTTTCTTCTGGTGAACTTT 4320
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4291 CGGATTTGCAATGTGGTGATATTTTAAATTTCTTTTCATTGGTTTCTTCTGGTGAACTCT 4350
Query 4321 CTATATCTGTATCCTTGCCTGAAGAAGGTGTTGGAGAGCCTGGAGATCGAAGAGGTTTAA 4380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4351 CTATATCTGTATCCTTGCCTGAAGAAGGTGTTGGAGAGCCTGGAGATCGAAGAGGTTTGA 4410
Query 4381 AACGTAGAGCTGATGACATAGAAGAATCTGAAGCTGATAGTGCTAAGAAATTAAAGCTAC 4440
||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||
Sbjct 4411 AACGTAGAGCTGATGACATAGAAGAATCTGAAGCTGAGAGTTCTAAGAAATTGAAGCTAC 4470
Query 4441 TAGGTGAAGGTGAAATCAACTTCCGAAAGGAAAAGGGTTTCCCTGGTATAGCAGTATCTG 4500
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4471 TAGGCGAAGGTGAAATCAACTTCCGAAAGGAAAAGGGTTTCCCTGGTATAGCAGTATCTG 4530
Query 4501 TTTGTCGTGCAACTCTACCAACAGCTAATGCAATAGAGTTGTTTAAGGATGATGACTCTC 4560
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4531 TTCGTCGTGCAACTATACCAACAGCTAATGCAATAGAGTTGTTTAAGGATGATGACTCTC 4590
Query 4561 GCACTGGTGAACTTCATTTCAAGTGGAGAGAAACGAATAGTGGCTCTGATTCTGATGACA 4620
||||||||||| ||||||| |||||| ||||| |||||||||||| ||||||||||||||
Sbjct 4591 GCACTGGTGAATTTCATTTGAAGTGGGGAGAAGCGAATAGTGGCTGTGATTCTGATGACA 4650
Query 4621 TGAAAGAACTTTTCAACTCTACAGGTTCTACTGTCATACCAAGCAGTCTAGGTGATTCTC 4680
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4651 TGAAAGAACTTTTCAACTCTACAGATTCTACTGTCATACCAAGCAGTCTAGGTGATTCTC 4710
Query 4681 CATGGCAAGCGATGGCCAATTTTACTAGTAGTATTATGTCCGAATCAGCAGATGAGGAAG 4740
| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||
Sbjct 4711 CCTGGCAAGCGATGGCCAGTTTTACTAGTAGCATTATGTCCGAATCAACAGATGAGGAAG 4770
Query 4741 TGAGTTTATTCAG-----GG-TTTTTGAAACGGTTTCCAATGCCCTTCAGAAGGCTGGTG 4794
| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||
Sbjct 4771 TTAGTTTATTCAGTCCCAGGGTTTTTGAAACCGTTTCCAATGCCCTTCAGAAGGCTGGTG 4830
Query 4795 ACCAAGGTCTGAGCATTGAAGAAGTCCACCGTCTTATTGATATCCCAAGCCAAGAAACTT 4854
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4831 ACCAAGGTCTGAGCATTGAAGAAGTCCACAGTCTTATTGATATCCCAAGCCAAGAAACTT 4890
Query 4855 GTGACTGCATTGTAGATGTACTTCAAACATTTGGGGTAGCTTTGAAGGTAAATGGCTATA 4914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4891 GTGACTGCATTGTAGATGTACTTCAAACATTTGGGGTAGCTTTGAAGGTAAATGGCTATA 4950
Query 4915 ATAATTTCTGTGTTGTCCATTCCTTCTACCGATCAAAGTACTTCTTGACATTGGAGGAGG 4974
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4951 ATAATTTCCGTGTTGTCCATTCCTTCTACCGATCAAAGTACTTCTTGACATTGGAGGAAG 5010
Query 4975 ATGGAACTTCCCAAAAAGGTCAACAGTCTCTACCAGTGAACTACCTAGAGAGAGCTGTTG 5034
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 5011 ATGGAACTTCCCAAAAAAGTCAACAGTCTCTACCAGTGAACTACCTAGAGAGAGCTGTTG 5070
Query 5035 GGGAACATAGGTCAAAAGAT------G-T------TA---T--TTCACAGGACGA-GCGA 5075
||||||||||||| |||||| | | || | |||||||||| | ||||
Sbjct 5071 GGGAACATAGGTCCAAAGATATCATTGCTAGCAGCTACAGTACTTCACAGGAC-ATGCGA 5129
Query 5076 GAGCATGTCGCTGGGAATAGCGTTCACAAGGTTACTATTCTTAACCTTCCTGAAATGGCT 5135
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 5130 GAGCATGTCGCTGGGAATAGCGTTCACAAGGTTACAATTCTTAACCTTCCTGAAACGGCT 5189
Query 5136 CAAACGAGCTGTTTGCACGAAGCATCTATCAAAGCTCCATCTGTTACTTTTGGAACGGGT 5195
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 5190 CAAACGAGCGGTTTGCATGAAGCATCTATCAAAGCTCCATCTGTTACTTTTGGAACGGGT 5249
Query 5196 ATCGAAGGTGAAACAAAGGAATCAACTTCGGAGAAGTCACCTGTGCCTATATTTCCATGG 5255
|| |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||
Sbjct 5250 ATTGAAGGTGAAACAAAGGAATCAACTTCTGAAAAGTCACCTGTGCCTATATATCCATGG 5309
Query 5256 GTAAACGCAGATGGGTCAATAAATAAAGTTGTATTTGATGGACTAGTTCGCCGTGTTCTT 5315
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 5310 GTAAACGCAGATGGGTCAATAAATAAAATTGTCTTTGATGGACTAGTTCGCCGTGTTCTT 5369
Query 5316 GGTACCGTGATGCAAAATCCCGGTATACCAGAGGACGAGATAATAAACCTAATGGACATA 5375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5370 GGTACCGTGATGCAAAATCCCGGTATACCAGAGGACGAGATAATAAACCTAATGGACATA 5429
Query 5376 CTAAATCCTCAGAGCTGTAGAAAGCTTCTGGAGTTGATGACACTGGACGGGTATATGAAA 5435
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 5430 CTAAATCCTCAGAGCTGTAGAAAGCTTCTGGAGTTGATGACACTCGACGGCTATATGAAA 5489
Query 5436 GTGAGGGAAATGGTGCAAACCAAATTCACCGGTCCTCCGTCTCTGTTAGCCGGTCTTGTT 5495
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 5490 GTGAGGGAAATGGTGCAAACCAAATTCACCGGTCCTCCGTCTCTGTTAGCCGGTCTCGTC 5549
Query 5496 TCAACAGGTCCTAGTAAACCGGAGCTTATCCGCCGCAAACACTTGTTTGCCAACTCCAAG 5555
|||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct 5550 TCAACAGGTCCTAGAAAACCGGAACTTATTCGCCGCAAACACTTGTTTGCAAACTCCAAG 5609
Query 5556 GGACTCTTTGCCTTGTAATATTTGTAAAATCTCTCT 5591
||||||||||||||||||| | ||||||||||||||
Sbjct 5610 GGACTCTTTGCCTTGTAATGTCTGTAAAATCTCTCT 5645
> AT1G58766.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1);
Has 63 Blast hits to 58 proteins in 18 species: Archae -
0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:21774381-21776765
REVERSE LENGTH=2003
Length=2003
Score = 1919 bits (1039), Expect = 0.0
Identities = 1512/1736 (87%), Gaps = 49/1736 (3%)
Strand=Plus/Plus
Query 3876 CGTCTTCATCAAACTATTAAGCCTTTAGATGAAAAGGACAACGGTAGTATACAAGTAC-G 3934
||||||||||| | | |||||| | |||||||||||||||| ||| |||||||||| | |
Sbjct 280 CGTCTTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAG 339
Query 3935 GAAATCTCTGGCAGTTTCTACTGCTGCAGAACTGTTAAAGCTTGTCTTTCTGAGCATGCC 3994
| ||||||||| ||| ||||| |||| ||||||||||||||||| ||||| ||||||||
Sbjct 340 G-AATCTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCC 398
Query 3995 TACTGCACCTGGTATGCCAAATTTGCTGGAAGATACCTTAAGACGTTATTCAGAGCGAGA 4054
|||||||||| ||||||||||||| ||||||||||||||| |||| ||||| ||| | ||
Sbjct 399 TACTGCACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGA 458
Query 4055 CCTCTTTACAGCCTATAGCTACCTCCGAGACAAAAAATTCCTGGTTGGTGGAAGTGGTGG 4114
|||||| || |||||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct 459 CCTCTTCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGG 518
Query 4115 ACAGCCATTTGTGCTT-TCTCAAAACTTCTTGCATAGTATTTCGAAGTCTCCATTCCCAG 4173
||| ||||||||| || ||||| || ||||||||||||||||| ||||| |||||||| |
Sbjct 519 ACAACCATTTGTG-TTATCTCAGAATTTCTTGCATAGTATTTCAAAGTCACCATTCCCGG 577
Query 4174 TTAATACTGGGACAAGAGCAGCCAAGTTTTCCAGTTGGCTTCTCGAACATGAAAGAGACC 4233
|||||||||||| |||||| |||||||| || ||||||||| ||||||| |||||||| |
Sbjct 578 TTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAAC 637
Query 4234 TTATGGCTGGGGGAGTCGCTCTTACTTCAGATTTGCAATGTGGCGATATTTTAAATTTCT 4293
|||||| || ||||||| ||||||||||||||||||||||||| ||| |||| |||||||
Sbjct 638 TTATGGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCT 697
Query 4294 TTTCATTGGTTTCTTCTGGTGAACTTTCTATATCTGTATCCTTGCCTGAAGAAGGTGTTG 4353
||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct 698 TTTCATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTG 757
Query 4354 GAGAGCCTGGAGATCGAAGAGGTTTAAAACGTAGAGCTGATGACATAGAAGAATCTGAAG 4413
| ||||||| | |||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 758 GGGAGCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAA- 816
Query 4414 C-TGATAGTGCTAAGAAATTAAAGCTACTAGGTGAAGGTGAAATCAACTTCCGAAAGGAA 4472
| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct 817 CTTGATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAA 876
Query 4473 AAGGGTTTCCCTGGTATAGCAGTATCTGTTTGTCGTGCAACTCTACCAACAGCTAATGCA 4532
||||||||||||||| |||||||||||||| ||||| |||| |||||| |||||| |||
Sbjct 877 AAGGGTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCA 936
Query 4533 ATAGAGTTGTTTAAGGATGATGACTCTCGCACTGGTGAACTTCATTTCAAGT-GGAGAGA 4591
||||||||||||||||||||||||||| | | |||||||||||||||| || || ||||
Sbjct 937 ATAGAGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGG-GAGA 995
Query 4592 AACGAATAGTGGCTCTGATTCTGATGACATGAAAGAACTTTTCAACTCTACAGG-TTCTA 4650
||| |||| ||||| || ||||||||| |||||||||||||| |||||| ||| | |||
Sbjct 996 AACAAATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTA-AGGATGCTA 1054
Query 4651 CTGTCATACCAAGCAGTCTAGGTGATTCTCCATGGCAAGCGATGGCCAATTTTACTAGTA 4710
|||| |||||| | ||| ||| ||||||||| |||||||| ||||| | | || |||||
Sbjct 1055 CTGTGATACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTT 1114
Query 4711 GTATTATGTCCGAATCAGCAGATGAGGAAGTGAGTTT-AT---T-CAG-GGTTTTTGAAA 4764
|||||||||||| || ||||| ||| || |||||| || | | | |||||| |||
Sbjct 1115 GTATTATGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAG 1174
Query 4765 CGGTTTCCAATGCCCTTCAGAAGGCTGGTGACCAAGGTCTGAGCATTGAAGAAGTCCACC 4824
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1175 CGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACT 1234
Query 4825 GTCTTATTGATATCCCAAGCCAAGAAACTTGTGACTGCATTGTAGATGTACTTCAAACAT 4884
||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1235 TTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACAT 1294
Query 4885 TTGGGGTAGCTTTGAAGGTAAATGGCTATAATAATTTCTGTGTTGTCCATTC-CTTCTAC 4943
|||| |||||||||||||||||||||||| |||||||| || |||||||||| || ||||
Sbjct 1295 TTGGAGTAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCT-CTAC 1353
Query 4944 CGATCAAAGTACTTCTTGACATTGGAGGA-GGATGGAACTTCCCAAAAAGGTCAACAGTC 5002
||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||
Sbjct 1354 CGATCAAAGTACTTCTTGACATTGGCGGATGG-TGGAACTACCCAAAATGGTCAACAGTC 1412
Query 5003 TCTACCAGTGAACTACCTAGAGAGAGCTGTTGG-GGAACATAGGTCAAAAGATGTTATTT 5061
|| ||||| ||||||| |||| | |||| |||| ||||||||||||||| |||||| |
Sbjct 1413 TCAACCAGCGAACTACGTAGAAAAAGCT-TTGGAGGAACATAGGTCAAACGATGTTGT-- 1469
Query 5062 CAC-AG-GACGA--G--CG--A---GA---GCATGT-C--G---CTGGGAATAGCGTTCA 5101
||| || ||| | | | | || ||| || | | ||| ||| ||||||||
Sbjct 1470 CACCAGCGACTACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCA 1529
Query 5102 CAAGGTTACTATTCTTAACCTTCCTGAAATGGCTCAAACGAGCTGTTTGCACGAAGCATC 5161
|||||| || ||||||||| |||||||||||||| |||| ||| ||||||| || | |||
Sbjct 1530 CAAGGTCACGATTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATC 1589
Query 5162 TATCAAAGCTCCATCTGTTACTTTTGGAACGGGTATCGAAGGTGAAACAAAGGAATCAAC 5221
|| |||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||
Sbjct 1590 TACCAAAGCTCCATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAAC 1649
Query 5222 TTCGGAGAAGTCACCTGTGCCTATATTTCCATGGGTAAACGCAGATGGGTCAATAAATAA 5281
||| | |||||||| ||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 1650 TTCTGTGAAGTCACAA---CCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAA 1706
Query 5282 AGTTGTATTTGATGGACTAGTTCGCCGTGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 5341
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1707 AGTTGTATTCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 1766
Query 5342 ACCAGAGGACGAGATAATAAACCTAATGGACATACTAAATCCTCAGAGCTGTAGAAAGCT 5401
||||||||| || || ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1767 ACCAGAGGAGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCT 1826
Query 5402 TCTGGAGTTGATGACACTGGACGGGTATATGAAAGTGAGGGAAATGGTGCAAACCAAATT 5461
|||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||
Sbjct 1827 TCTGGAGTTGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATT 1886
Query 5462 CACCGGTCCTCCGTCTCTGTTAGCCGGTCTTGT-TTCAACAGGTCCTAGTAAACCGGAGC 5520
| ||||||||||||| ||||| |||||||| | || | | |||| ||| ||| |||| |
Sbjct 1887 TAGCGGTCCTCCGTCTTTGTTAACCGGTCTTCTCTTTACC-GGTCATAGAAAAACGGAAC 1945
Query 5521 TTATCCGCCGCAAACACTTGTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAATAT 5576
||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1946 TTATCAGCCGGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAATAT 2001
Score = 147 bits (79), Expect = 2e-33
Identities = 98/107 (92%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 3630 GATGAAGAAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATGATGTT 3689
||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 112 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTT 171
Query 3690 CTTGATCTCAAGAAGATGGCTAAACTGGTGGCCC-CTAAACGGACGA 3735
||||| ||||||||||||| ||||||| || ||| || |||||||||
Sbjct 172 CTTGAGCTCAAGAAGATGGGTAAACTGATG-CCCTCTCAACGGACGA 217
> AT1G59077.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: B-block binding subunit of TFIIIC (TAIR:AT1G59453.1);
Has 63 Blast hits to 58 proteins in 18 species: Archae -
0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 55; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:21810644-21813023
REVERSE LENGTH=1998
Length=1998
Score = 1914 bits (1036), Expect = 0.0
Identities = 1509/1733 (87%), Gaps = 49/1733 (3%)
Strand=Plus/Plus
Query 3876 CGTCTTCATCAAACTATTAAGCCTTTAGATGAAAAGGACAACGGTAGTATACAAGTAC-G 3934
||||||||||| | | |||||| | |||||||||||||||| ||| |||||||||| | |
Sbjct 280 CGTCTTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAG 339
Query 3935 GAAATCTCTGGCAGTTTCTACTGCTGCAGAACTGTTAAAGCTTGTCTTTCTGAGCATGCC 3994
| ||||||||| ||| ||||| |||| ||||||||||||||||| ||||| ||||||||
Sbjct 340 G-AATCTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCC 398
Query 3995 TACTGCACCTGGTATGCCAAATTTGCTGGAAGATACCTTAAGACGTTATTCAGAGCGAGA 4054
|||||||||| ||||||||||||| ||||||||||||||| |||| ||||| ||| | ||
Sbjct 399 TACTGCACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGA 458
Query 4055 CCTCTTTACAGCCTATAGCTACCTCCGAGACAAAAAATTCCTGGTTGGTGGAAGTGGTGG 4114
|||||| || |||||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct 459 CCTCTTCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGG 518
Query 4115 ACAGCCATTTGTGCTT-TCTCAAAACTTCTTGCATAGTATTTCGAAGTCTCCATTCCCAG 4173
||| ||||||||| || ||||| || ||||||||||||||||| ||||| |||||||| |
Sbjct 519 ACAACCATTTGTG-TTATCTCAGAATTTCTTGCATAGTATTTCAAAGTCACCATTCCCGG 577
Query 4174 TTAATACTGGGACAAGAGCAGCCAAGTTTTCCAGTTGGCTTCTCGAACATGAAAGAGACC 4233
|||||||||||| |||||| |||||||| || ||||||||| ||||||| |||||||| |
Sbjct 578 TTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAAC 637
Query 4234 TTATGGCTGGGGGAGTCGCTCTTACTTCAGATTTGCAATGTGGCGATATTTTAAATTTCT 4293
|||||| || ||||||| ||||||||||||||||||||||||| ||| |||| |||||||
Sbjct 638 TTATGGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCT 697
Query 4294 TTTCATTGGTTTCTTCTGGTGAACTTTCTATATCTGTATCCTTGCCTGAAGAAGGTGTTG 4353
||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct 698 TTTCATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTG 757
Query 4354 GAGAGCCTGGAGATCGAAGAGGTTTAAAACGTAGAGCTGATGACATAGAAGAATCTGAAG 4413
| ||||||| | |||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 758 GGGAGCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAA- 816
Query 4414 C-TGATAGTGCTAAGAAATTAAAGCTACTAGGTGAAGGTGAAATCAACTTCCGAAAGGAA 4472
| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct 817 CTTGATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAA 876
Query 4473 AAGGGTTTCCCTGGTATAGCAGTATCTGTTTGTCGTGCAACTCTACCAACAGCTAATGCA 4532
||||||||||||||| |||||||||||||| ||||| |||| |||||| |||||| |||
Sbjct 877 AAGGGTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCA 936
Query 4533 ATAGAGTTGTTTAAGGATGATGACTCTCGCACTGGTGAACTTCATTTCAAGT-GGAGAGA 4591
||||||||||||||||||||||||||| | | |||||||||||||||| || || ||||
Sbjct 937 ATAGAGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGG-GAGA 995
Query 4592 AACGAATAGTGGCTCTGATTCTGATGACATGAAAGAACTTTTCAACTCTACAGG-TTCTA 4650
||| |||| ||||| || ||||||||| |||||||||||||| |||||| ||| | |||
Sbjct 996 AACAAATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTA-AGGATGCTA 1054
Query 4651 CTGTCATACCAAGCAGTCTAGGTGATTCTCCATGGCAAGCGATGGCCAATTTTACTAGTA 4710
|||| |||||| | ||| ||| ||||||||| |||||||| ||||| | | || |||||
Sbjct 1055 CTGTGATACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTT 1114
Query 4711 GTATTATGTCCGAATCAGCAGATGAGGAAGTGAGTTT-AT---T-CAG-GGTTTTTGAAA 4764
|||||||||||| || ||||| ||| || |||||| || | | | |||||| |||
Sbjct 1115 GTATTATGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAG 1174
Query 4765 CGGTTTCCAATGCCCTTCAGAAGGCTGGTGACCAAGGTCTGAGCATTGAAGAAGTCCACC 4824
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1175 CGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACT 1234
Query 4825 GTCTTATTGATATCCCAAGCCAAGAAACTTGTGACTGCATTGTAGATGTACTTCAAACAT 4884
||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1235 TTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACAT 1294
Query 4885 TTGGGGTAGCTTTGAAGGTAAATGGCTATAATAATTTCTGTGTTGTCCATTC-CTTCTAC 4943
|||| |||||||||||||||||||||||| |||||||| || |||||||||| || ||||
Sbjct 1295 TTGGAGTAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCT-CTAC 1353
Query 4944 CGATCAAAGTACTTCTTGACATTGGAGGA-GGATGGAACTTCCCAAAAAGGTCAACAGTC 5002
||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||
Sbjct 1354 CGATCAAAGTACTTCTTGACATTGGCGGATGG-TGGAACTACCCAAAATGGTCAACAGTC 1412
Query 5003 TCTACCAGTGAACTACCTAGAGAGAGCTGTTGG-GGAACATAGGTCAAAAGATGTTATTT 5061
|| ||||| ||||||| |||| | |||| |||| ||||||||||||||| |||||| |
Sbjct 1413 TCAACCAGCGAACTACGTAGAAAAAGCT-TTGGAGGAACATAGGTCAAACGATGTTGT-- 1469
Query 5062 CAC-AG-GACGA--G--CG--A---GA---GCATGT-C--G---CTGGGAATAGCGTTCA 5101
||| || ||| | | | | || ||| || | | ||| ||| ||||||||
Sbjct 1470 CACCAGCGACTACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCA 1529
Query 5102 CAAGGTTACTATTCTTAACCTTCCTGAAATGGCTCAAACGAGCTGTTTGCACGAAGCATC 5161
|||||| || ||||||||| |||||||||||||| |||| ||| ||||||| || | |||
Sbjct 1530 CAAGGTCACGATTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATC 1589
Query 5162 TATCAAAGCTCCATCTGTTACTTTTGGAACGGGTATCGAAGGTGAAACAAAGGAATCAAC 5221
|| |||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||
Sbjct 1590 TACCAAAGCTCCATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAAC 1649
Query 5222 TTCGGAGAAGTCACCTGTGCCTATATTTCCATGGGTAAACGCAGATGGGTCAATAAATAA 5281
||| | |||||||| ||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 1650 TTCTGTGAAGTCACAA---CCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAA 1706
Query 5282 AGTTGTATTTGATGGACTAGTTCGCCGTGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 5341
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1707 AGTTGTATTCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 1766
Query 5342 ACCAGAGGACGAGATAATAAACCTAATGGACATACTAAATCCTCAGAGCTGTAGAAAGCT 5401
||||||||| || || ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1767 ACCAGAGGAGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCT 1826
Query 5402 TCTGGAGTTGATGACACTGGACGGGTATATGAAAGTGAGGGAAATGGTGCAAACCAAATT 5461
|||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||
Sbjct 1827 TCTGGAGTTGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATT 1886
Query 5462 CACCGGTCCTCCGTCTCTGTTAGCCGGTCTTGT-TTCAACAGGTCCTAGTAAACCGGAGC 5520
| ||||||||||||| ||||| |||||||| | || | | |||| ||| ||| |||| |
Sbjct 1887 TAGCGGTCCTCCGTCTTTGTTAACCGGTCTTCTCTTTACC-GGTCATAGAAAAACGGAAC 1945
Query 5521 TTATCCGCCGCAAACACTTGTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAA 5573
||||| |||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1946 TTATCAGCCGGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA 1998
Score = 147 bits (79), Expect = 2e-33
Identities = 98/107 (92%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 3630 GATGAAGAAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATGATGTT 3689
||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 112 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTT 171
Query 3690 CTTGATCTCAAGAAGATGGCTAAACTGGTGGCCC-CTAAACGGACGA 3735
||||| ||||||||||||| ||||||| || ||| || |||||||||
Sbjct 172 CTTGAGCTCAAGAAGATGGGTAAACTGATG-CCCTCTCAACGGACGA 217
> AT1G59453.1 | Symbols: | B-block binding subunit of TFIIIC |
chr1:21846902-21853384 REVERSE LENGTH=5190
Length=5190
Score = 1914 bits (1036), Expect = 0.0
Identities = 1509/1733 (87%), Gaps = 49/1733 (3%)
Strand=Plus/Plus
Query 3876 CGTCTTCATCAAACTATTAAGCCTTTAGATGAAAAGGACAACGGTAGTATACAAGTAC-G 3934
||||||||||| | | |||||| | |||||||||||||||| ||| |||||||||| | |
Sbjct 3472 CGTCTTCATCAGATTTTTAAGCATGTAGATGAAAAGGACAATGGTTGTATACAAGTGCAG 3531
Query 3935 GAAATCTCTGGCAGTTTCTACTGCTGCAGAACTGTTAAAGCTTGTCTTTCTGAGCATGCC 3994
| ||||||||| ||| ||||| |||| ||||||||||||||||| ||||| ||||||||
Sbjct 3532 G-AATCTCTGGTAGTGTCTACCGCTGTTGAACTGTTAAAGCTTGTGTTTCTAAGCATGCC 3590
Query 3995 TACTGCACCTGGTATGCCAAATTTGCTGGAAGATACCTTAAGACGTTATTCAGAGCGAGA 4054
|||||||||| ||||||||||||| ||||||||||||||| |||| ||||| ||| | ||
Sbjct 3591 TACTGCACCTAGTATGCCAAATTTACTGGAAGATACCTTACGACGATATTCCGAGGGTGA 3650
Query 4055 CCTCTTTACAGCCTATAGCTACCTCCGAGACAAAAAATTCCTGGTTGGTGGAAGTGGTGG 4114
|||||| || |||||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct 3651 CCTCTTCACCGCCTATAGCTACCTCCGAGACAAAAAGTTCTTGGTTGGTGGAAGTGATGG 3710
Query 4115 ACAGCCATTTGTGCTT-TCTCAAAACTTCTTGCATAGTATTTCGAAGTCTCCATTCCCAG 4173
||| ||||||||| || ||||| || ||||||||||||||||| ||||| |||||||| |
Sbjct 3711 ACAACCATTTGTG-TTATCTCAGAATTTCTTGCATAGTATTTCAAAGTCACCATTCCCGG 3769
Query 4174 TTAATACTGGGACAAGAGCAGCCAAGTTTTCCAGTTGGCTTCTCGAACATGAAAGAGACC 4233
|||||||||||| |||||| |||||||| || ||||||||| ||||||| |||||||| |
Sbjct 3770 TTAATACTGGGAAAAGAGCTGCCAAGTTCTCAAGTTGGCTTGTCGAACACGAAAGAGAAC 3829
Query 4234 TTATGGCTGGGGGAGTCGCTCTTACTTCAGATTTGCAATGTGGCGATATTTTAAATTTCT 4293
|||||| || ||||||| ||||||||||||||||||||||||| ||| |||| |||||||
Sbjct 3830 TTATGGATGAGGGAGTCACTCTTACTTCAGATTTGCAATGTGGTGATGTTTTGAATTTCT 3889
Query 4294 TTTCATTGGTTTCTTCTGGTGAACTTTCTATATCTGTATCCTTGCCTGAAGAAGGTGTTG 4353
||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||
Sbjct 3890 TTTCATTGGTTGCTTCTGGTGAACTCTCTTTATCTGTATCTTTGCCTGAAGAAGGTGTTG 3949
Query 4354 GAGAGCCTGGAGATCGAAGAGGTTTAAAACGTAGAGCTGATGACATAGAAGAATCTGAAG 4413
| ||||||| | |||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 3950 GGGAGCCTGAACATCGAAGAGGTTTAAAACGTAGAGCTGAGGATGTAGAAGAATCTGAA- 4008
Query 4414 C-TGATAGTGCTAAGAAATTAAAGCTACTAGGTGAAGGTGAAATCAACTTCCGAAAGGAA 4472
| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct 4009 CTTGATAGTGCTAAGAAATTTAAGTTACTAGGTGAAGGTGAAATCAACGTCCGAAAGGAA 4068
Query 4473 AAGGGTTTCCCTGGTATAGCAGTATCTGTTTGTCGTGCAACTCTACCAACAGCTAATGCA 4532
||||||||||||||| |||||||||||||| ||||| |||| |||||| |||||| |||
Sbjct 4069 AAGGGTTTCCCTGGTTTAGCAGTATCTGTTCATCGTGTAACTATACCAATAGCTAACGCA 4128
Query 4533 ATAGAGTTGTTTAAGGATGATGACTCTCGCACTGGTGAACTTCATTTCAAGT-GGAGAGA 4591
||||||||||||||||||||||||||| | | |||||||||||||||| || || ||||
Sbjct 4129 ATAGAGTTGTTTAAGGATGATGACTCTTGGTCCGGTGAACTTCATTTCATGTCGG-GAGA 4187
Query 4592 AACGAATAGTGGCTCTGATTCTGATGACATGAAAGAACTTTTCAACTCTACAGG-TTCTA 4650
||| |||| ||||| || ||||||||| |||||||||||||| |||||| ||| | |||
Sbjct 4188 AACAAATAATGGCTGTGGTTCTGATGATATGAAAGAACTTTTGGACTCTA-AGGATGCTA 4246
Query 4651 CTGTCATACCAAGCAGTCTAGGTGATTCTCCATGGCAAGCGATGGCCAATTTTACTAGTA 4710
|||| |||||| | ||| ||| ||||||||| |||||||| ||||| | | || |||||
Sbjct 4247 CTGTGATACCAGGTAGTTTAGTTGATTCTCCTTGGCAAGCAATGGCTAGTGTTGCTAGTT 4306
Query 4711 GTATTATGTCCGAATCAGCAGATGAGGAAGTGAGTTT-AT---T-CAG-GGTTTTTGAAA 4764
|||||||||||| || ||||| ||| || |||||| || | | | |||||| |||
Sbjct 4307 GTATTATGTCCGGTTCTGCAGAGGAGCAACAGAGTTTAATCAGTCCCGAGGTTTTCGAAG 4366
Query 4765 CGGTTTCCAATGCCCTTCAGAAGGCTGGTGACCAAGGTCTGAGCATTGAAGAAGTCCACC 4824
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 4367 CGGTTTCCAATGCCCTTCACAAGGCTGGTGACCAAGGTCTAAGCATTGAAGAAGTCCACT 4426
Query 4825 GTCTTATTGATATCCCAAGCCAAGAAACTTGTGACTGCATTGTAGATGTACTTCAAACAT 4884
||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 4427 TTCTTATTAATATTCCAAGCCAAGAAACTTGTGACTGCATTGTAGAAGTACTTCAAACAT 4486
Query 4885 TTGGGGTAGCTTTGAAGGTAAATGGCTATAATAATTTCTGTGTTGTCCATTC-CTTCTAC 4943
|||| |||||||||||||||||||||||| |||||||| || |||||||||| || ||||
Sbjct 4487 TTGGAGTAGCTTTGAAGGTAAATGGCTATGATAATTTCCGTCTTGTCCATTCGCT-CTAC 4545
Query 4944 CGATCAAAGTACTTCTTGACATTGGAGGA-GGATGGAACTTCCCAAAAAGGTCAACAGTC 5002
||||||||||||||||||||||||| ||| || ||||||| ||||||| |||||||||||
Sbjct 4546 CGATCAAAGTACTTCTTGACATTGGCGGATGG-TGGAACTACCCAAAATGGTCAACAGTC 4604
Query 5003 TCTACCAGTGAACTACCTAGAGAGAGCTGTTGG-GGAACATAGGTCAAAAGATGTTATTT 5061
|| ||||| ||||||| |||| | |||| |||| ||||||||||||||| |||||| |
Sbjct 4605 TCAACCAGCGAACTACGTAGAAAAAGCT-TTGGAGGAACATAGGTCAAACGATGTTGT-- 4661
Query 5062 CAC-AG-GACGA--G--CG--A---GA---GCATGT-C--G---CTGGGAATAGCGTTCA 5101
||| || ||| | | | | || ||| || | | ||| ||| ||||||||
Sbjct 4662 CACCAGCGACTACAGTACTTCAAAAGACAAGCAAGTTCATGTTTCTGAGAACAGCGTTCA 4721
Query 5102 CAAGGTTACTATTCTTAACCTTCCTGAAATGGCTCAAACGAGCTGTTTGCACGAAGCATC 5161
|||||| || ||||||||| |||||||||||||| |||| ||| ||||||| || | |||
Sbjct 4722 CAAGGTCACGATTCTTAACATTCCTGAAATGGCTGAAACAAGCGGTTTGCAAGAGGAATC 4781
Query 5162 TATCAAAGCTCCATCTGTTACTTTTGGAACGGGTATCGAAGGTGAAACAAAGGAATCAAC 5221
|| |||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||
Sbjct 4782 TACCAAAGCTCCATCTGTTACTTTTGGAACGAGCATCGAAGGCGAAACGAAGGAATCAAC 4841
Query 5222 TTCGGAGAAGTCACCTGTGCCTATATTTCCATGGGTAAACGCAGATGGGTCAATAAATAA 5281
||| | |||||||| ||||||||||||||| ||||||||||||| ||| |||||||
Sbjct 4842 TTCTGTGAAGTCACAA---CCTATATTTCCATGGATAAACGCAGATGGATCAGTAAATAA 4898
Query 5282 AGTTGTATTTGATGGACTAGTTCGCCGTGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 5341
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 4899 AGTTGTATTCGATGGACTAGTTCGTCGCGTTCTTGGTACCGTGATGCAAAATCCCGGTAT 4958
Query 5342 ACCAGAGGACGAGATAATAAACCTAATGGACATACTAAATCCTCAGAGCTGTAGAAAGCT 5401
||||||||| || || ||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 4959 ACCAGAGGAGGAAATCATAAACCAAATGGACGTACTAAATCCTCAGAGCTGTAGAAAGCT 5018
Query 5402 TCTGGAGTTGATGACACTGGACGGGTATATGAAAGTGAGGGAAATGGTGCAAACCAAATT 5461
|||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||
Sbjct 5019 TCTGGAGTTGATGACACTAGATGGGTACATGAAAGTAAGGGAAATGGTGCAAACCAAATT 5078
Query 5462 CACCGGTCCTCCGTCTCTGTTAGCCGGTCTTGT-TTCAACAGGTCCTAGTAAACCGGAGC 5520
| ||||||||||||| ||||| |||||||| | || | | |||| ||| ||| |||| |
Sbjct 5079 TAGCGGTCCTCCGTCTTTGTTAACCGGTCTTCTCTTTACC-GGTCATAGAAAAACGGAAC 5137
Query 5521 TTATCCGCCGCAAACACTTGTTTGCCAACTCCAAGGGACTCTTTGCCTTGTAA 5573
||||| |||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct 5138 TTATCAGCCGGAAACACTTCTTTGCCAACTCCAAGGGACTCTTTGCATTGTAA 5190
Score = 1895 bits (1026), Expect = 0.0
Identities = 1622/1899 (85%), Gaps = 83/1899 (4%)
Strand=Plus/Plus
Query 1642 TACCGAAGCCAGCTAAACCGAAGGTGCACCAACCTCAGCCGATTACTGTTGAAAACTCTC 1701
|||| ||| | |||||| | || ||||| |||||||| | |||| |||||||||||
Sbjct 1451 TACCCAAGTCGGCTAAATCAAAAGTGCAGCAACCTCA--TG-CTACTATTGAAAACTCTA 1507
Query 1702 GAAGAGAGCGGAGAATACTTGAGCGCTTAAATGAGGAGAAGTTTGTTGTAAGAGCCGAGC 1761
| ||||||| |||||||||||||| ||||| ||||||||||||||| | |||| |||
Sbjct 1508 GGAGAGAGCACAGAATACTTGAGCGTTTAAAAGAGGAGAAGTTTGTTTTGAGAGTGGAGT 1567
Query 1762 TACATAAATGGCTGCTCAGTCTTGAGAAGGACAGGAGCTCCAAAGTGGATAGGAAAACCA 1821
| ||||||||||| || | | |||| |||||||||||| |||| ||||||||||||||||
Sbjct 1568 TCCATAAATGGCTTCTTACTTTTGAAAAGGACAGGAGCCCCAAGGTGGATAGGAAAACCA 1627
Query 1822 TTGACAGAATTCTAAACAGGCTTCAAGA-AGAAGGACTCTGC-AAT-TGCATGAACATTA 1878
|| ||||||||||| |||||| ||| || | |||| |||||| ||| || || |||
Sbjct 1628 TTTACAGAATTCTAGACAGGCGTCAGGACA-AAGGGCTCTGCAAATGTG-TTG-GTATTC 1684
Query 1879 GTGTCCCAAATGTTACTAATTGTGGTCGCAATCGTAGCTCTGTGGTAGTTTTTCATCCAT 1938
|||| |||||||| | | |||||| || | |||| |||||||| ||||| | |||||||
Sbjct 1685 GTGTTCCAAATGTAAATGATTGTGACCGTAGTCGTTGCTCTGTGATAGTTCTGCATCCAT 1744
Query 1939 CTGTTCAAAGTTTGACTCGGGACATAGTTGGTGAAATTCATGATAGGATTAGGTCTTTTG 1998
|||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1745 CTGTTCAAAGATTGACTCGAGACATAGGAAATGAAATTCATGATAGGATTAGGTCTTTTG 1804
Query 1999 AACTGGGACTCCGTGGCCAGA-ACTTATCGAAGAGGAAAAGCAACGAG-CTAATTCCAAT 2056
|| | ||| ||||| |||||| | | |||||||||| ||||| || || | | | ||| |
Sbjct 1805 AATTAGGATTCCGTAGCCAGAGA-TCATCGAAGAGGGAAAGCGACAAGAC-AGTCCCAGT 1862
Query 2057 ATTGAATGACGTTCAGAGAGGTCAAACAAATGTAGATTTGGATGCGCGTGCTAGCAAATC 2116
||||||||||||||||||| | | | | | | || |||||||||||
Sbjct 1863 ATTGAATGACGTTCAGAGA-G-----C-----T--A--T--A----CGAGCTAGCAAATC 1901
Query 2117 AGGAGCCATGCGAGCCAATGGGTTTGTGCTTGCAAAGATGGTTCGTGTGAAGCTCCTACA 2176
|||||| ||||||||||| ||| |||| |||||||||||| ||||||||||||| |||||
Sbjct 1902 AGGAGCTATGCGAGCCAAAGGGGTTGTTCTTGCAAAGATGTTTCGTGTGAAGCTTCTACA 1961
Query 2177 TTGTTTCCTTTGGGACTATTTTAGTTCTTTGCCTAGCTGGGACAATGCTTTTTCGTCTAT 2236
||||||||||||||||||||||||||||||||| ||||||||| ||| | ||| |||||
Sbjct 1962 CTGTTTCCTTTGGGACTATTTTAGTTCTTTGCCTGGCTGGGACAGTGCCTCTTCTTCTAT 2021
Query 2237 ACATGATCAGAAATTTGACAATTTGTTTGCACTTGAAGATGCTTTTAAAGCCATGCCACT 2296
||| |||| | || | | ||||||||| ||||| |||| ||||||| ||||||||||||
Sbjct 2022 ACACCATCACATATCTAAGAATTTGTTTTCACTTAAAGACGCTTTTAGAGCCATGCCACT 2081
Query 2297 CGAACTATTTTTACAAGTTGTTGGATCTACTCAGAAAGCCGATGATATGATGAAGAAATG 2356
| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2082 CCAACTATTTTTACAAGTTGTTGGATCTACTCAGAAAGCTGATGATATCATGAAGAAATA 2141
Query 2357 CAAACAGGTTATGCGTCTTTCTGAGCTTCCTGGCGAAGAGTATAAGCTTCTAATGGATAC 2416
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 2142 CAAACAGGTTATGCGTCTTTCTGAGCTTCCTAGCGAAGAGTATAAACTTCTAATGGATAC 2201
Query 2417 TCTTGCAACTGGGAGATTATCGATGCTTATTGATATCTTACGCCGGTTGAAGTTGATTCA 2476
|| || | ||||| ||||||||||||||| |||| ||||||||||| |||||||||||
Sbjct 2202 TCGTGTGATTGGGATATTATCGATGCTTATCAATATTTTACGCCGGTTAAAGTTGATTCA 2261
Query 2477 GATGGTAAGCAG-TAGACTCAGACGCGATGAA-ATTGAGGAGAAGTATGCTAATC-TAAC 2533
||||||||| | |||||||||||| ||| || ||| |||||||||||||| | ||||
Sbjct 2262 GATGGTAAG-TGATAGACTCAGACGTGAT-AAGATT---GAGAAGTATGCTAA-CTTAAC 2315
Query 2534 CCATGCAATGGAGCTTAAGCCCTATATAGAGGAACCTGTGTTTGTTGCTGCTACATCCAA 2593
|||||||||||||||||||| ||||||||||||||||||||||||||||||| || | |
Sbjct 2316 ACATGCAATGGAGCTTAAGCCTTATATAGAGGAACCTGTGTTTGTTGCTGCTAAATTCGA 2375
Query 2594 TGTTATGTCTCTTGATTTTCGTCCACGTATTCGGCATGACTTTATTCTATCAAATAGAGA 2653
||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2376 TGTCACGTCTCTTGATTTTCGTCCACGTATTCGGCATGACTTTATTCTATCGAATAGAGA 2435
Query 2654 TGCTGTTGATGAATACTGGCTAACTTTAGAGTATTGCTATGCTGCTGCCGATCATAGA-G 2712
||||||||||||||| ||||||||| |||| ||||||||||||||| | ||||| || |
Sbjct 2436 TGCTGTTGATGAATATTGGCTAACTCTAGAATATTGCTATGCTGCTTCTGATCAC-GAAG 2494
Query 2713 CTGCTAAGCTAGCATTTCCGGGATCTGTTGT-TCAAGAGGTTTTTCGTTTCCGCTCTTGG 2771
||||||||| ||||||||| ||||||||| | ||||||||||||| || |||||||||||
Sbjct 2495 CTGCTAAGCAAGCATTTCCAGGATCTGTT-TCTCAAGAGGTTTTTGGTGTCCGCTCTTGG 2553
Query 2772 GCCTCAGATCGTGTCATGACAACAGAACAGCGTGCTAAGCTCTTACAGCGCATTGCAATC 2831
|||||||||| |||||||||| ||||||||||||| |||||||||||| | | | ||
Sbjct 2554 GCCTCAGATCATGTCATGACAGCAGAACAGCGTGCGAAGCTCTTACAGTG--T---A-TC 2607
Query 2832 GATGAGAAGGAAAAACTCTCATTCAAAGAATGTGAGAAGATTGCTAAGGATCTGAACCTG 2891
|||||||||| |||||||||||||||||| ||||||||| |||| |||||||| ||||||
Sbjct 2608 GATGAGAAGGCAAAACTCTCATTCAAAGAGTGTGAGAAGTTTGCCAAGGATCTAAACCTG 2667
Query 2892 ACCTTAGAGCAGGTTATGCATGTCTATCATGCGAAGCATGGAAGACGCGTGAAGTCCAAA 2951
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 2668 ACCATAGAGCAGGTTATGCATGTCTATCATGCGAAGCATGGAAGACGTGTGAAGTC-AAA 2726
Query 2952 T-CAAAAGATAAAAATTTTGCTATAGATAATAGCCCTTCTTCATCTTCCGGGAAAAGAAA 3010
| |||||||||||||| ||| |||| ||||| ||||| ||||||| |||||||||
Sbjct 2727 TTCAAAAGATAAAAATAAAGCTGTAGAAAATAGTCCTTC---ATCTTCCAAGAAAAGAAA 2783
Query 3011 AAGAGAAACTATCGTAAAGACTACAGGAGAAGGTGTCAGATCCATAATAGTAGATG-A-A 3068
||||| | || | |||||||||| |||||||||||||| ||||||||||||||||| | |
Sbjct 2784 AAGAGCATCTCTTGTAAAGACTAAAGGAGAAGGTGTCAAATCCATAATAGTAGATGGACA 2843
Query 3069 GAAAAGGTTCTGAATTCAGATGCCATTAATGCCTCAAATAGTGAGAATTTTCAAAATTCA 3128
|||| | |||| ||||| ||||||||| |||||||||||||||||| ||||||| |||||
Sbjct 2844 GAAA-G-TTCTAAATTCTGATGCCATTGATGCCTCAAATAGTGAGAGTTTTCAAGATTCA 2901
Query 3129 TTAGAAGAGGACCAAACCCCCATTCCGATGCATCAGGAGCATAATCTACAAGAAAATGCA 3188
||| |||| |||||||||||||||| ||||||| | | || | ||| |||||
Sbjct 2902 TTACAAGATGACCAAACCCCCATTCAAATGCATC-G-A-CA-A--------GAACATGCA 2949
Query 3189 GAGATAAGGGATCTTGCTGAAGATGAAGGC-CAGTGTTCTTCTATTATCAACCAGT-ACG 3246
|||||||| ||||| ||||||||||| | ||||||||| ||| ||||| || | |
Sbjct 2950 GAGATAAGCAATCTTACTGAAGATGAAC-CTCAGTGTTCTAATATCATCAAT-AGGCATG 3007
Query 3247 CAAGTTCAAAGACCACAGCAACT-CCTTCACAAAGATTTTCGTGGACAGATGAGGCAGAC 3305
||||||||||||||| | || || ||||||||||||||| ||||||||||||||||||||
Sbjct 3008 CAAGTTCAAAGACCAGATCA-CTTCCTTCACAAAGATTTACGTGGACAGATGAGGCAGAC 3066
Query 3306 AGGAAATTGTTGAGTCAATATGTTAGACACCGCGCAGCTCTTGGGGCGAAATTTCATGGA 3365
||||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct 3067 AGGAAATTGTTGAGTAAATATGCTAGACACCGTGCAGCTCTTGGGGCAAAATTTCATGGA 3126
Query 3366 GTAA-TCTGGGCTTCAGTTCCAGAACTGCCTGCCCCACCTTTAGCTTGCAAGCGACGGAT 3424
|||| | ||||||||||||| |||||| ||||| || |||||| |||||||| |||||||
Sbjct 3127 GTAAAT-TGGGCTTCAGTTCAAGAACTACCTGCACCTCCTTTACCTTGCAAGAGACGGAT 3185
Query 3425 TCAAATATTGATGAAGAATGATAAATTTCGGAAGGCGATCATGAGGCTTTGCAATCTGCT 3484
||||| | |||||| |||||||||| |||| |||||| ||||||||||||||||||| ||
Sbjct 3186 TCAAACAATGATGAGGAATGATAAAGTTCGTAAGGCGGTCATGAGGCTTTGCAATCTACT 3245
Query 3485 CAGTGAGCGTTATGCAAGACATCTAGAGACGAAA-CAGA 3522
||||||||||||||||| ||||||| ||||| || ||||
Sbjct 3246 CAGTGAGCGTTATGCAAAACATCTAAAGACGGAATCAGA 3284
Score = 785 bits (425), Expect = 0.0
Identities = 648/751 (86%), Gaps = 34/751 (5%)
Strand=Plus/Plus
Query 701 AGAGGATACGCTCATTAAAGATTTTCTACCAGCAATGAAGGCAA-TTTGTGATAAGCTTG 759
|||||| ||||||||||| |||||||||||||||||| ||| || ||||||||||||| |
Sbjct 624 AGAGGACACGCTCATTAACGATTTTCTACCAGCAATGCAGG-AAGTTTGTGATAAGCTCG 682
Query 760 AAGAAGCTAACGAGAAGGTTCTAGTCGTCTCGGACATTAAGCAAGACCTTGGTTATTTGG 819
|| |||||||||| || ||| |||| ||||||||||||||||||||||||||||| ||
Sbjct 683 AAAAAGCTAACGACAAAGTTTTAGTTATCTCGGACATTAAGCAAGACCTTGGTTATACGG 742
Query 820 GATCACAT-TCAAGGCATAGAGCTTGGAGAAGTGTTTGTCGCCGGTTGACAGATTCTCAT 878
||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 743 GATCAGATAT-AAGGCATAGAGCTTGGAGAAGTGTTTGTCGCCGGTTGATAGATTCTCAT 801
Query 879 GTAGTAGAGGAGTTTGATGCTGTGGTGAACAATAAGGTTGAACGATGCCTCCGTTTGTTA 938
|||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct 802 GTAGTAGAGGAGTTTGATGCCATGGTGAACAATAAGGTTGAAAGATGTCTCCGTTTGTTA 861
Query 939 AAAAGATTTTCAGAAAAAGATTTTAATAACTACTCTGGGAAAAAACAACTCCTAAAATTC 998
||||||||||||| | |||||||||| ||| ||| ||||||| |||||| ||||||||
Sbjct 862 AAAAGATTTTCAGCAGAAGATTTTAA---CTATTCTAGGAAAAAGCAACTCATAAAATTC 918
Query 999 GGAAGGAGTATTCAAAGAACAGAACAAACTTTGGAGCTTCCAATAGATAATCAAATTTAT 1058
||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 919 GGAAGGAGTGTTCAAAAAACAGAACAGACTTTGGAGCTTTCAATAGATAATCAAATTTAT 978
Query 1059 GATATGGTTGATGCTGAAGGATCGAAAGGCTTGGCTGTGATGGAGGTATGTGAAAGACTT 1118
||||||||||||||| ||||||| |||||||| ||||| |||||| ||||||||||||||
Sbjct 979 GATATGGTTGATGCTCAAGGATCTAAAGGCTTAGCTGTTATGGAGTTATGTGAAAGACTT 1038
Query 1119 GGAATTGACAAGAAGAAGAGCTACT-CTCGGCTTTATAGTATATGTTTAAGAGTCGGGAT 1177
|| ||||| |||||||||| ||| | ||||||||| ||||||||||| |||||| |||||
Sbjct 1039 GGGATTGATAAGAAGAAGATCTA-TGCTCGGCTTTGTAGTATATGTTCAAGAGTTGGGAT 1097
Query 1178 GCATATACAGGCAGAAAGCCACAAGAAGACTAGAGTATTTCGTGTTTGGACTTCTGGTAA 1237
|||| |||||||||||||||||||||||||| |||||||||| ||||||||||| || |
Sbjct 1098 GCATTTACAGGCAGAAAGCCACAAGAAGACTCGAGTATTTCGACTTTGGACTTCTCGTCA 1157
Query 1238 TGCTGGGTCCGAGTGTTCTGATCTGTTTCCTGAGAAAGTTGAAAATCGTAGCTGGGAAAA 1297
|||| ||||| ||| ||||||| ||||||||| |||| ||||||| ||| ||||| |
Sbjct 1158 TGCTCGGTCCAAGTCTTCTGATAAGTTTCCTGATAAAGCTGAAAATATTAGAGGGGAAGA 1217
Query 1298 TAATGTATCGACTAATGATTTTGGCACACCTCATGATACTGGTGGATTGGCT----C-AG 1352
||||| || ||| | | |||||||||| ||||| |||||||||| | |
Sbjct 1218 TAATG-ATT--CTA--G-T------ACACCTCATGGTACTGATGGATTGGCTAAAACTAA 1265
Query 1353 A-CCTCCATCGAACACAGT-CTTGCAATTTCTGATGCTGAATTTGCTAC-AC-C-TGCAA 1407
| || | || ||||||||| || |||||||| |||||||| ||| |||| || | |||||
Sbjct 1266 AACCACAATGGAACACAGTACT-GCAATTTCAGATGCTGACTTTTCTACTACACCTGCAA 1324
Query 1408 G-GTTAACTGATTCTGAAAACAATTCAGGAG 1437
| || |||||||||||||| ||||||||||
Sbjct 1325 GTGT-AACTGATTCTGAAAGGAATTCAGGAG 1354
Score = 147 bits (79), Expect = 2e-33
Identities = 98/107 (92%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 3630 GATGAAGAAAAATGGGATGACTTCAATGAAAAGAGTATAAGTCAAGCCTTTAATGATGTT 3689
||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 3304 GATGAAGGAAAATGGGATGACTTCAATGAAAAGAGTATAAGCCAAGCCTTTAATAATGTT 3363
Query 3690 CTTGATCTCAAGAAGATGGCTAAACTGGTGGCCC-CTAAACGGACGA 3735
||||| ||||||||||||| ||||||| || ||| || |||||||||
Sbjct 3364 CTTGAGCTCAAGAAGATGGGTAAACTGATG-CCCTCTCAACGGACGA 3409
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 279279371681
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5