BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg920720 Length=787 Score E Sequences producing significant alignments: (Bits) Value AT1G17950.1 | Symbols: ATMYB52, BW52, MYB52 | myb domain protei... 1219 0.0 AT1G73410.1 | Symbols: ATMYB54, MYB54 | myb domain protein 54 |... 370 1e-101 AT5G17800.1 | Symbols: AtMYB56, MYB56 | myb domain protein 56 |... 187 1e-46 > AT1G17950.1 | Symbols: ATMYB52, BW52, MYB52 | myb domain protein 52 | chr1:6177617-6179289 FORWARD LENGTH=1123 Length=1123 Score = 1219 bits (660), Expect = 0.0 Identities = 748/789 (95%), Gaps = 12/789 (2%) Strand=Plus/Plus Query 5 GAGAGGAATTAGAAGAATGATGTGCAGTCGAGGCCATTGGAGACCTGCAGAAGATGAGAA 64 |||||| |||| || ||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 133 GAGAGGTATTA-AAAAATGATGTGTAGTCGAGGCCATTGGAGACCTGCAGAAGACGAGAA 191 Query 65 GCTAAGAGAACTCGTCGAACAATTTGGTCCTCATAATTGGAACGCCATAGCTCAGAAGCT 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 GCTAAGAGAACTCGTCGAACAATTTGGTCCTCATAATTGGAACGCCATAGCTCAGAAGCT 251 Query 125 CTCTGGTCGATCTGGCAAGAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCTAGGAT 184 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 CTCTGGTCGATCTGGTAAGAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCTAGGAT 311 Query 185 TAACCGAAACCCTTTCACGGAGGAAGAAGAAGAAAGGCTTTTAGCGTCTCATCGGATCCA 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 312 TAACCGAAACCCTTTCACGGAGGAAGAAGAAGAAAGGCTTTTAGCGTCTCATCGGATCCA 371 Query 245 TGGGAATAGATGGTCTGTGATCGCTAGATTTTT-CCCAGGTCGAACCGATAACGCTGTTA 303 |||||| |||||||||||||||||||||||||| ||| |||||||| ||||||||||||| Sbjct 372 TGGGAACAGATGGTCTGTGATCGCTAGATTTTTTCCC-GGTCGAACTGATAACGCTGTTA 430 Query 304 AAAACCATTGGCACGTCATCATGGCTCGTCGTGGCCGAGAACGGTCCAAGCTCCGACCAC 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 431 AAAACCATTGGCACGTCATCATGGCTCGTCGTGGCCGAGAACGGTCCAAGCTCCGTCCAC 490 Query 364 GTGGCCATGGCCATGATGGCACGGTATCTGCGACTGGGATGATGGGTAATTATAACGACT 423 | |||| |||||||||||||||||| |||||||||||||||| ||||||||||| |||| Sbjct 491 GAGGCCTTGGCCATGATGGCACGGTGGCTGCGACTGGGATGATTGGTAATTATAAAGACT 550 Query 424 GCGATAAGGAGAGAAGATTGGCAACCACAACCGCTATCAATTTTCCTTATCAATTCTCTC 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 551 GCGATAAGGAGAGAAGATTGGCAACCACAACCGCTATCAATTTTCCTTATCAATTCTCTC 610 Query 484 ATATTAATCATTTTCAAGTCCTCAAAGAATTCTTGACCGGAAAGACCGGGTTCCGGAATA 543 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| Sbjct 611 ATATTAATCATTTTCAAGTCCTCAAAGAGTTCTTGACCGGAAAGATCGGGTTCAGAAATA 670 Query 544 GTACTACTCCAATACAAGAAGGAGCAATAGACCAAACTAAACGACCGATGGAGTTCTACA 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 671 GTACTACTCCAATACAAGAAGGAGCAATAGACCAAACTAAACGACCGATGGAGTTCTACA 730 Query 604 ATTTTCTCCAATTAAACACGGATTCGAAGAAACCCGTAGTGATAGACAATTCAAGAAAAG 663 ||||||| ||| |||||||||||||||||| || || | ||||||| ||||||||||||| Sbjct 731 ATTTTCTTCAAGTAAACACGGATTCGAAGATACACGAATTGATAGATAATTCAAGAAAAG 790 Query 664 ATGAAGAAGAAGAAGATGTCGCTCAAAACAACCG--T----AACGAGAATTGTGTTCCCT 717 | ||||||||||| ||||| |||||||||||| | ||||||||||||||||| | Sbjct 791 ACGAAGAAGAAGA---TGTCGATCAAAACAACCGAATTCCTAACGAGAATTGTGTTCCAT 847 Query 718 TTTTCGACTTTTTGTCTGTTGGAAACTCTGCCTCTCAGGGTTTATGTTAATTAGTCCGTA 777 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 848 TTTTCGACTTTTTGTCTGTTGGAAACTCTGCCTCTCAGGGTTTATGTTAATTTGTCCGTA 907 Query 778 CCACATGTA 786 ||||||||| Sbjct 908 CCACATGTA 916 > AT1G73410.1 | Symbols: ATMYB54, MYB54 | myb domain protein 54 | chr1:27601632-27603317 FORWARD LENGTH=1231 Length=1231 Score = 370 bits (200), Expect = 1e-101 Identities = 276/313 (88%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 24 ATGTGCAGTCGAGGCCATTGGAGACCTGCAGAAGATGAGAAGCT-AAGAGAACTCGTCGA 82 |||||||| ||||||||||||||||| || ||||| |||||||| ||| || || ||||| Sbjct 227 ATGTGCAGCCGAGGCCATTGGAGACCAGCTGAAGACGAGAAGCTCAAG-GATCTTGTCGA 285 Query 83 ACAATTTGGTCCTCATAATTGGAACGCCATAGCTCAGAAGC-TCTCTGGTCGATCTGGCA 141 ||||| |||||||| |||||||||||||| |||| |||| || ||||||| ||||| | Sbjct 286 ACAATACGGTCCTCACAATTGGAACGCCATTGCTCTCAAGCTTC-CTGGTCGCTCTGGTA 344 Query 142 AGAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCTAGGATTAACCGAAACCCTTTCA 201 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 345 AGAGTTGTAGATTGAGATGGTTTAATCAATTGGATCCAAGGATCAACCGAAACCCTTTCA 404 Query 202 CGGAGGAAGAAGAAGAAAGGCTTTTAGCGTCTCATCGGATCCATGGGAATAGATGGTCTG 261 |||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct 405 CGGAAGAAGAAGAAGAAAGACTTTTAGCGGCTCATCGGATCCATGGGAACAGATGGTCCA 464 Query 262 TGATCGCTAGATTTTTCCCAGGTCGAACCGATAACGCTGTTAAAAACCATTGGCACGTCA 321 | ||||| || ||||||| || |||| |||||||| || || |||||||||||||||| Sbjct 465 TCATCGCAAGGCTTTTCCCTGGAAGAACTGATAACGCCGTCAAGAACCATTGGCACGTCA 524 Query 322 TCATGGCTCGTCG 334 ||||||||||||| Sbjct 525 TCATGGCTCGTCG 537 > AT5G17800.1 | Symbols: AtMYB56, MYB56 | myb domain protein 56 | chr5:5877189-5879331 FORWARD LENGTH=1290 Length=1290 Score = 187 bits (101), Expect = 1e-46 Identities = 242/308 (79%), Gaps = 18/308 (6%) Strand=Plus/Plus Query 33 CGAGGCCATTGGAGACCTGCAGAAGATGAGAAGCT-AAGAGAACTCGTCGAACAATTTGG 91 ||||| || |||||||| ||||||||| || || ||| || || || | || ||||| Sbjct 335 CGAGGACACTGGAGACCAACAGAAGATGCTAAACTCAAG-GAGCTTGTTGCCCAGTTTGG 393 Query 92 TCCTCATAATTGGAACGCCATAGCTCAGAAGC-TCTCTGGTCGATCTGGCAAGAGTTGTA 150 ||| || || |||||| || || | | | ||| |||| |||| ||||||||||||| Sbjct 394 TCCCCAAAACTGGAACTTGATTTCTAACCACCTTCT-TGGTAGATCAGGCAAGAGTTGTA 452 Query 151 GATTGAGATGGTTTAATCAATTGGATCCTAGGATTAACC-GAAACCCTTTCACGGAGGAA 209 |||||||||||||||| ||| | || || ||||||||| || | |||| |||||||||| Sbjct 453 GATTGAGATGGTTTAACCAACTAGACCCAAGGATTAACAAGAGAGCCTT-CACGGAGGAA 511 Query 210 GAAGAAGAA-AGGCTTTTAGC-GTCTCATCGGATCC-ATGGGAATA-GATGGTCTGTGAT 265 ||||| | ||||| ||||| | ||||||| | || |||| || | | ||| || |||| Sbjct 512 GAAGA-GTTTAGGCTGTTAGCAG-CTCATCG-AGCCTATGGCAACAAG-TGGGCTTTGAT 567 Query 266 CGCTAGAT-T-TTTCCCAGGTCGAACCGATAACGCTGTTAAAAACCATTGGCACGTCATC 323 | || | | | ||||| |||||| |||||||||||||| || |||||||||||||||||| Sbjct 568 CTCTCG-TCTCTTTCC-AGGTCGTACCGATAACGCTGTCAAGAACCATTGGCACGTCATC 625 Query 324 ATGGCTCG 331 |||||||| Sbjct 626 ATGGCTCG 633 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38278420014 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5