BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920751
Length=2079
Score E
Sequences producing significant alignments: (Bits) Value
AT1G18260.1 | Symbols: | HCP-like superfamily protein | chr1:6... 3450 0.0
AT1G73570.1 | Symbols: | HCP-like superfamily protein | chr1:2... 1038 0.0
> AT1G18260.1 | Symbols: | HCP-like superfamily protein | chr1:6278848-6282103
REVERSE LENGTH=2331
Length=2331
Score = 3450 bits (1868), Expect = 0.0
Identities = 2009/2079 (97%), Gaps = 2/2079 (0%)
Strand=Plus/Plus
Query 2 CGGTGGAGGAAGAAGTAGAATGAGAATATCAGGTTACGGAATCGTTATTCTCTCTTTACT 61
|||||||||| |||||| ||||||||||| | | ||||||||||||||||||||||||||
Sbjct 77 CGGTGGAGGAGGAAGTACAATGAGAATATTAAGCTACGGAATCGTTATTCTCTCTTTACT 136
Query 62 CGTTTTCTCTTTCGTTGAACTTAACGTTCACGCTCGTCCCGTTGTTCTCGTCCTCTCAAA 121
||||||||||||| ||||| || |||||||||||||||||| |||||||||||||||||
Sbjct 137 CGTTTTCTCTTTCATTGAATTTGGCGTTCACGCTCGTCCCGTCGTTCTCGTCCTCTCAAA 196
Query 122 TGACGATCTCAATAGCGGCGGCGATGATAACGGAGTCGGAGAGTCCTCTGACTTCGATGA 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 197 TGACGATCTCAATAGCGGCGGCGATGATAACGGAGTCGGAGAGTCCTCTGACTTCGATGA 256
Query 182 GTTTGGGGAATCCGAACCTAAGTCCGAAGAGGAGCTTGATCCCGGTTCATGGCGATCGAT 241
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 257 GTTTGGAGAATCCGAACCTAAGTCCGAAGAGGAGCTTGATCCCGGTTCATGGCGATCGAT 316
Query 242 CTTCGAGCCAGATGACTCCACTGTCCAAGCCGCGTCGCCGCAGTATTACTCCGGCCTCAA 301
|||||||||||||||||| || |||||||| || ||||||||||| ||||||||||||||
Sbjct 317 CTTCGAGCCAGATGACTCAACAGTCCAAGCAGCCTCGCCGCAGTACTACTCCGGCCTCAA 376
Query 302 AAGGATTCTATCAGCAGCGAGTGAGGGAAATTTCAGGTTAATGGAGGAAGCAGTGGATGA 361
|| ||||||||| || ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 377 AAAGATTCTATCGGCGGCGAGTGAGGGAAATTTCAGGTTGATGGAAGAAGCAGTGGATGA 436
Query 362 GATAGAGGCTGCTTCTTCGGCTGGAGATCCACACGCACAGTCGATAATGGGGTTCGTTTA 421
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 437 GATAGAGGCTGCTTCTTCAGCTGGAGATCCACACGCACAGTCGATAATGGGGTTCGTTTA 496
Query 422 CGGGATTGGAATGATGCGAGAGAAGAGCAAAAGCAAATCGTTTCTTCACCATAATTTCGC 481
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 497 CGGGATAGGAATGATGCGAGAGAAGAGCAAAAGCAAGTCGTTTCTTCACCATAATTTCGC 556
Query 482 AGCTGCTGGTGGGAATATGCAGTCGAAGATGGCACTTGCGTTCACGTAT-TTGCGTCAAG 540
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 557 AGCTGCTGGTGGGAATATGCAGTCGAAGATGGCACTTGCGTTCACGTATCTT-CGTCAAG 615
Query 541 ATATGCATGATAAAGCTGTGCAATTATATGCTGAATTAGCTGAGACGGCTGTCAATAGTT 600
||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 616 ATATGCATGATAAAGCTGTTCAATTATATGCTGAATTAGCAGAGACAGCTGTCAATAGTT 675
Query 601 TTCTGATCTCAAAGGATTCTCCGGTGGTTGAACCAACTAGAATTCATAGCGGAACTGAAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 TTCTGATCTCAAAGGATTCTCCGGTGGTTGAACCAACTAGAATTCATAGCGGAACTGAAG 735
Query 661 AAAACAAAGGTGCTCTAAGGAAATCCCGTGGCGAGGAGGATGAAGATTTCCAGATATTGG 720
| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 736 AGAACAAAGGTGCTCTAAGGAAATCTCGAGGCGAGGAGGATGAAGATTTCCAGATATTGG 795
Query 721 AATATCAGGCACAGAAAGGGAATGCTAATGCCATGTACAAAATTGGCCTGTTCTACTACT 780
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 796 AATATCAGGCACAGAAAGGGAATGCTAATGCAATGTACAAAATTGGACTGTTCTACTACT 855
Query 781 TTGGCCTGCGAGGATTAAGGCGTGATCACACCAAGGCATTGCACTGGTTTTTGAAAGCAG 840
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 856 TTGGCCTGCGAGGATTAAGGCGTGATCACACCAAGGCATTGCATTGGTTTTTGAAAGCAG 915
Query 841 TAGATAAAGGAGAGCCGAGGTCTATGGAACTTCTGGGGGAGATATATGCTCGAGGAGCTG 900
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 916 TAGATAAAGGAGAGCCGAGGTCAATGGAACTTCTGGGGGAGATATATGCTAGAGGAGCTG 975
Query 901 GTGTTGAAAGAAATTATACCAAGGCACTTGAATGGCTTACACTTGCTGCAAAAGAAGGTC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 GTGTTGAAAGAAATTATACCAAGGCACTTGAATGGCTTACACTTGCTGCAAAAGAAGGTC 1035
Query 961 TCTATTCAGCATTTAATGGAATTGGCTACTTGTATGTCAAAGGCTATGGAGTAGATAAGA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 TCTATTCAGCATTTAATGGAATTGGCTACTTGTATGTCAAAGGCTATGGAGTAGATAAGA 1095
Query 1021 AAAATTACACTAAGGCAAGAGAATATTTTGAGAAGGCTGTTGACAATGAAGACCCCAGTG 1080
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096 AAAACTATACTAAGGCAAGAGAATATTTTGAGAAGGCTGTTGACAATGAAGACCCCAGTG 1155
Query 1081 GGCATTATAACCTTGGAGTTTTGTATCTTAAAGGCATCGGAGTCAAAAGGGATGTGAGGC 1140
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1156 GGCATTATAACCTTGGAGTTTTGTATCTTAAAGGCATCGGAGTCAACAGGGATGTGAGGC 1215
Query 1141 AGGCAACAAAATATTTCTTTGTTGCTGCAAATGCTGGTCAACCAAAGGCTTTCTATCAAC 1200
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 AGGCAACAAAATACTTCTTTGTTGCTGCAAATGCTGGTCAACCAAAGGCTTTCTATCAAC 1275
Query 1201 TCGCCAAGATGTTCCATACTGGTGTTGGGCTTAAAAAGAACCTGGAAATGGCAACTTCAT 1260
|||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct 1276 TCGCCAAGATGTTCCATACTGGTGTTGGGCTTAAGAAGAATCTGGAGATGGCGACTTCAT 1335
Query 1261 TTTATAAGTTAGTAGCAGAAAGGGGGCCGTGGAGTTCTCTCTCTAGATGGGCTCTTGAAG 1320
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 TTTATAAGCTAGTAGCAGAAAGGGGGCCGTGGAGTTCTCTCTCTAGATGGGCTCTTGAAG 1395
Query 1321 CTTACTTAAAAGGTGATGTGGGTAAGGCTTTGATCTTGTACTCAAGGATGGCAGAGATGG 1380
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1396 CTTACTTAAAAGGTGATGTGGGTAAGGCTTTGATTTTGTACTCAAGGATGGCAGAGATGG 1455
Query 1381 GTTATGAAGTAGCACAAAGTAACGCTGCCTGGATCCTTGATAAATACGGGGAAAGAAGCA 1440
|||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct 1456 GTTATGAAGTGGCACAAAGTAATGCTGCCTGGATCCTCGATAAATACGGCGAAAGAAGCA 1515
Query 1441 TGTGCATGGGAGTATCTGGATTTTGCACAGACAAAGAGAGACATGAGCGGGCACATTCTT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1516 TGTGCATGGGAGTATCTGGATTTTGCACAGACAAAGAGAGACATGAGCGGGCACATTCTT 1575
Query 1501 TGTGGTGGCGGGCCTCTGAACAAGGCAATGAACATGCTGCTCTGCTCATTGGAGATGCAT 1560
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1576 TGTGGTGGCGGGCCTCTGAACAAGGCAATGAACATGCTGCTCTGCTTATTGGAGATGCAT 1635
Query 1561 ATTACTATGGCCGGGGAACCGAGAGAGATTTTGTACGTGCGGCTGAAGCATACATGCATG 1620
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||
Sbjct 1636 ATTACTATGGCCGGGGAACTGAGAGAGATTTTGTGCGTGCGGCAGAAGCATACATGCATG 1695
Query 1621 CTAAATCACAGTCAAACGCGCAAGCAATGTTCAACCTCGGTTACATGCATGAGCATGGAC 1680
||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1696 CTAAATCACAGTCCAATGCGCAAGCAATGTTCAACCTCGGTTACATGCATGAACATGGAC 1755
Query 1681 AAGGACTTCCCTTTGATCTCCATTTAGCAAAACGTTACTATGATCAAGCCCTTCAGAGCG 1740
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1756 AAGGACTTCCCTTTGATCTCCATTTAGCAAAACGTTACTATGATGAATCCCTTCAGAGCG 1815
Query 1741 ATGCAGCCGCCAGATTGCCAGTCACACTTGCTCTCGCTAGCTTATGGCTCCGAAGAAACT 1800
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1816 ATGCAGCCGCGAGATTGCCAGTCACACTTGCTCTCGCTAGCTTATGGCTCCGTAGAAACT 1875
Query 1801 ATGCTGATACCGTCCTGGTGAGAGTTGTGGATTCATTACCAGAAGTGTATCCAAAGGTGG 1860
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1876 ATGCTGATACCGTCCTGGTGAGAGTTGTGGATTCATTACCAGAAGTGTATCCGAAGGTAG 1935
Query 1861 AGACTTGGATAGAGAATGTGGTGTTTGAAGAAGGTAATGCAACGATACTTACACTCTTTG 1920
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1936 AGACTTGGATAGAGAATGTGGTGTTTGAAGAAGGTAATGCAACAATACTTACACTCTTTG 1995
Query 1921 TCTGTCTCATTACAATTCTCTATCTCCGGGAAAGACAACGTAGACAAGTCGTCGTTGTTG 1980
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 TCTGTCTCATCACAATTCTCTATCTCCGGGAAAGACAACGTAGACAAGTCGTCGTTGTTG 2055
Query 1981 CCGATCCAGTGGCAGCTGACGTGGCACAACCCCTCGACGCTGACGTGGCACAACACCTCG 2040
||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct 2056 CCGATCCAGTGGCTGCTGACGTGGCACAACCGCTCGACGCTGATGTGGCGCAACACCTCG 2115
Query 2041 CTGCGTTCCCACGGTAATCAATTGATAATCGTTTTCGTC 2079
|||||||||||||||||||||||||||||||||||||||
Sbjct 2116 CTGCGTTCCCACGGTAATCAATTGATAATCGTTTTCGTC 2154
> AT1G73570.1 | Symbols: | HCP-like superfamily protein | chr1:27650992-27653942
FORWARD LENGTH=1815
Length=1815
Score = 1038 bits (562), Expect = 0.0
Identities = 810/930 (87%), Gaps = 16/930 (2%)
Strand=Plus/Plus
Query 972 TTTAATGGAATTGGCTACTTGTATGTCAAAGGCTATGGAGTAGATAAGAAAAATTACACT 1031
|||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 826 TTTAATGGCCTTGGTTACTTGTATGTCAAAGGCTATGGAGTAGATAAGAGAAACTACACT 885
Query 1032 AAGGCAAGAGAATATTTTGAGAAGGCTGTTGACAATGAAGACCCCAGTGGGCATTATAAC 1091
||||| |||||||| ||||||| ||||| | | |||||||| || || ||||||||||||
Sbjct 886 AAGGCGAGAGAATACTTTGAGATGGCTGCTAATAATGAAGATCCTAGCGGGCATTATAAC 945
Query 1092 CTTGGAGTTTTGTATCTTAAAGGCATC-GGAGTCAA-AAGGGATGTGAGGCAGGCAACAA 1149
|||||||| |||||||||||||||| | |||||||| || |||||||||||| ||||| |
Sbjct 946 CTTGGAGTGTTGTATCTTAAAGGCA-CTGGAGTCAAGAA-GGATGTGAGGCATGCAACCA 1003
Query 1150 AATATTTCTTTGTTGCTGCAAATGCTGGTCAACCAAAGGCTTTCTATCAACTCGCCAAGA 1209
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1004 AATATTTCTTTGTTGCTGCCAATGCTGGTCAACCAAAGGCTTTTTATCAACTCGCCAAGA 1063
Query 1210 TGTTCCATACTGGTGTTGGGCTTAAAAAGAACCTGGAAATGGCAACTTCATTTTATAAGT 1269
|||||||||| || ||||| |||| ||||||| |||||||||| || | |||||||||
Sbjct 1064 TGTTCCATACAGGCGTTGGACTTACAAAGAACTTGGAAATGGCGACAACTTTTTATAAGC 1123
Query 1270 TAGTAGCAGAAAGGGGGCCGTGGAGTTCTCTCTCTAGATGGGCTCTTGAAGCTTACTTAA 1329
||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct 1124 TAGTAGCAGAAAGAGGACCATGGAGTTCTCTCTCTAGATGGGCTCTTGAAGCTTACTTGA 1183
Query 1330 AAGGTGATGTGGGTAAGGCTTTGATCTTGTACTCAAGGATGGCAGAGATGGGTTATGAAG 1389
||||||||||||| |||||||| || ||||| || || ||| ||||| | ||||||||||
Sbjct 1184 AAGGTGATGTGGGAAAGGCTTTTATATTGTATTCGAGAATGTCAGAGCTCGGTTATGAAG 1243
Query 1390 TAGCACAAAGTAACGCTGCCTGGATCCTTGATAAATACGGGGAAAGAAGCATGTGCATGG 1449
||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1244 TAGCACAAAGTAATGCTGCCTGGATCGTCGATAAATACGGGGAAAGAAGCATGTGCATGG 1303
Query 1450 GAGTATCTGGATTTTGCACAGACAAAGAGAGACATGAGCGGGCACATTCTTTGTGGTGGC 1509
|||| | ||| ||||||||||| || ||||| || || ||||| ||||||||||||||||
Sbjct 1304 GAGTGTATGGGTTTTGCACAGATAAGGAGAGGCACGATCGGGCTCATTCTTTGTGGTGGC 1363
Query 1510 GGGCCTCTGAACAAGGCAATGAACATGCTGC-TCTGCTCATTGGAGATGCATATTACTAT 1568
| ||||||||||| || || ||||||||||| | |||| ||||||||||||||||||||
Sbjct 1364 GTGCCTCTGAACAGGGAAACGAACATGCTGCAT-TGCTTATTGGAGATGCATATTACTAC 1422
Query 1569 GGCCGGGGAACCGAGAGAGATTTTGTACGTGCGGCTGAAGCATACATGCATGCTAAATCA 1628
|| ||||| || ||||| ||||| || ||||| || || || |||||| ||||||||||
Sbjct 1423 GGTCGGGGTACAGAGAGGGATTTCGTGCGTGCAGCAGAGGCGTACATGTATGCTAAATCT 1482
Query 1629 CAGTCAAACGCGCAAGCAATGTTCAACCTCGGTTACATGCATGAGCATGGACAAGGACTT 1688
|| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1483 CAATCAAATGCGCAAGCAATGTTCAACCTCGGTTACATGCATGAGCATGGAGAAGGTCTT 1542
Query 1689 CCCTTTGATCTCCAT-TTAGCAAAACGTTACTATGATCAAGCCCTTCAGAGCGATGCAGC 1747
|| |||||||||||| || || ||||||||||| || || ||||| ||||||||| | ||
Sbjct 1543 CCTTTTGATCTCCATCTT-GCTAAACGTTACTACGACCAGGCCCTCCAGAGCGATACTGC 1601
Query 1748 CGCCAGATTGCCAGTCACACTTGCTCTCGCTAGCT-TATGGCTCCGAAGAAACTATGCTG 1806
|||| |||||| ||||| |||||||| || || | ||||| |||| |||||||||||||
Sbjct 1602 TGCCAAATTGCCCGTCACGCTTGCTCTTGCGAG-TGTATGGGTCCGCAGAAACTATGCTG 1660
Query 1807 ATACCGTCCTGGTG-AGAGTTGTGGATTCATTACCAGAAGTGTATCCAAAGGTGGAG-AC 1864
|||| | ||||||| | ||| || |||| |||||||||||| ||| |||||||| | |
Sbjct 1661 ATACTGCCCTGGTGCA-AGTACTGAATTCCTTACCAGAAGTGCATCAAAAGGTGGTGGAA 1719
Query 1865 TTGGATAGAGAATGTGG-TGTTTGAAGAAG 1893
| || ||||||||| || |||| |||||||
Sbjct 1720 TGGG-TAGAGAATG-GGATGTTGGAAGAAG 1747
Score = 544 bits (294), Expect = 2e-153
Identities = 615/767 (80%), Gaps = 33/767 (4%)
Strand=Plus/Plus
Query 87 GTTCACGCTCGTCCCGTT-GTTCTCGTCCTCTCAAATGACGATCTCAATAGCGGCGGCGA 145
||||| || |||||| || |||||||| ||||| || || |||||||| | || |
Sbjct 67 GTTCAAGCCCGTCCC-TTCGTTCTCGTTCTCTCCAACGAAGATCTCAACGGAGGTTTTAA 125
Query 146 TGATAACGGAGTCGGA-GAGTCCTCTGACTTCGATGAGTTTGGGGAATCCGAACCTAAGT 204
||||||||| | | | || ||||| || |||||||||||||| ||||||||||| || |
Sbjct 126 TGATAACGGCG-CCTACGAATCCTCCGATTTCGATGAGTTTGGTGAATCCGAACCCAAAT 184
Query 205 CCGAAGAGGAGCTTGATCCCGGTTCATGGCGATCGA-TCTTCGAGCCAGATGACTCCACT 263
||||||||||||||||||||||||||||||| |||| |||||||| || |||| |||||
Sbjct 185 CCGAAGAGGAGCTTGATCCCGGTTCATGGCG-TCGAATCTTCGAGACAAATGAGTCCACC 243
Query 264 GTCCAAGCC---GCGTCGCCGCAGTATTACTCCGGCCTC-A-AAAGGATTCTATCAGCAG 318
||||| ||| ||||||||||||||||||||||| ||| | ||| ||||| || || |
Sbjct 244 GTCCACGCCTCTGCGTCGCCGCAGTATTACTCCGGACTCCACAAA--ATTCTCTCGGCTG 301
Query 319 CGAGTGAGGGAAATT-T-CAGGTTAATGGAGGAAGCAGTGG-ATGAGATAGAGGC-TGCT 374
||||||| ||||| | || || ||||||||||| || | |||||||| | | ||
Sbjct 302 CGAGTGAAGGAAACACTACA--TTGATGGAGGAAGCGGTTTCA-GAGATAGATTCGT-CT 357
Query 375 TCTTCGGCTGGAGATCCACACGCACAGTC-GATAATGGGGTTCGTTTACGGGATTGGAAT 433
| ||| | ||||||||||||||||| || | | ||||||||||| ||||||||||| ||
Sbjct 358 GCCTCGTCAGGAGATCCACACGCACAATCAG-TGATGGGGTTCGTATACGGGATTGGGAT 416
Query 434 GATGCGAGAGAAGAGCAAAAGCAAATCGTTTCTT-CACCATAATTTCGCAGCTGCTGGTG 492
|||||| |||| |||| |||||||||| || || || ||| ||||||| ||||| || |
Sbjct 417 GATGCGTGAGACGAGCCGAAGCAAATCGATT-TTGCATCATCATTTCGCGGCTGCGGGAG 475
Query 493 GGAATATGCAGTCGAAGATGGCACTTGCGTTCACG-TATTTGCGTCAAGATATGCATGAT 551
| ||||||||||| || ||||||||||| || | | ||| | | ||| ||||| |||||
Sbjct 476 GAAATATGCAGTCTAAAATGGCACTTGCTTTTA-GATATCTAAGACAAAATATGTATGAT 534
Query 552 AAAGCTGT-GCAATTATATGCTGAATTAGCTGAGACGGCTGTCAATAG-TTTTCTGATCT 609
|||||||| | | |||||||||||| |||| ||||| || || ||||| |||| |||| |
Sbjct 535 AAAGCTGTTG-AGTTATATGCTGAACTAGCAGAGACAGCAGTGAATAGCTTTT-TGATAT 592
Query 610 CAAAGGATTCTCCGGTGGTTGAACCAACTAGAATTCATAGCGGAACTGAAGAAAACAAAG 669
| ||||||||||| ||| ||| ||| |||||| || | ||||| || || || ||||
Sbjct 593 CCAAGGATTCTCCAATGGCTGAGCCAGTTAGAATCCACATTGGAACAGAGGAGAATAAAG 652
Query 670 GTGCTCTAAGGAAATCCCGTGGCGAGGAGGATGAAGATTTCCAGATATTGGAATATCAGG 729
||| |||||||| || || || ||||| ||||| ||||| |||||||||||||| ||||
Sbjct 653 ATGCACTAAGGAAGTCACGAGGGGAGGAAGATGAGGATTTTCAGATATTGGAATACCAGG 712
Query 730 CACAGAAAGGGAATGCTA-ATGCCATGTACAAAATTGGCCTGTTCTACTACTTTGGCCTG 788
|| ||||||||||| || | || ||| |||||||||| ||||| || |||||||| ||
Sbjct 713 CAGAGAAAGGGAATTCTGTA-GCAATGCACAAAATTGGACTGTTTTATTACTTTGGTTTG 771
Query 789 CGAGGATTAAGGCGTGATCACACCAAGGCATTGCACTGGTTTTTGAA 835
|||||||||||||||||||| | ||||| ||| | ||||||| |||
Sbjct 772 AGAGGATTAAGGCGTGATCACGCTAAGGCGTTGTATTGGTTTTCGAA 818
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103061718885
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5