BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg920765
Length=1224
Score E
Sequences producing significant alignments: (Bits) Value
AT1G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1770 0.0
AT1G73480.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 758 0.0
> AT1G18360.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:6316695-6319427 REVERSE LENGTH=1673
Length=1673
Score = 1770 bits (958), Expect = 0.0
Identities = 1048/1092 (96%), Gaps = 3/1092 (0%)
Strand=Plus/Plus
Query 112 TAAACCGGATTCAAATTCGAAATGATCTTCCGATTAGTATCGTTGCTACTCGACGATCAT 171
||||||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||
Sbjct 285 TAAACCGGATTCAAAATCGAAATGATGTTCCGATTAGTGTCATAGCTACTCGACGATCAT 344
Query 172 CAATGTCGGTGGAGGCGTTGCCAACGAGATTAAAATCTTCACTGAAGAAGACGAGGAAGA 231
||||||||||||||||||| || | ||| |||||||| |||| |||||| ||||||||
Sbjct 345 CAATGTCGGTGGAGGCGTTTCCGATGAGGTTAAAATCATCAC---AGAAGAAGAGGAAGA 401
Query 232 GGAACATCGGTTGCGGTGTTTCCCCTTCTTCGCCGACAACAACGGTGGTTGATGATGAAG 291
|||||| ||||||||||||||||||||||||||||| || |||||||| ||||| ||||
Sbjct 402 TGAACATTGGTTGCGGTGTTTCCCCTTCTTCGCCGACGACGACGGTGGTAGATGAGGAAG 461
Query 292 TGGCGGTTAGACGGAATTTGGCAATGAGGCGCGTTTTGGAGGATAACGGTGGCGATGGAA 351
| || |||| ||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct 462 TAGCCATTAGGCGGAAATTGGCAATGAGACGGGTTTTGGAGGATAACGGTGGCGATGGAA 521
Query 352 GCTCCGTCAGAGATTTCTCGCTATTCACGACCAAGAGAGGTGACACGTTGTTCACTCAGT 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 GCTCCGTCAGAGATTTCTCGCTATTCACGACCAAGAGAGGTGACACGTTGTTCACTCAGT 581
Query 412 CATGGACACCTGTTGACTCCGCTAAGAACAGGGGACTTGTTGTTCTGCTACATGGTCTGA 471
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 582 CATGGACTCCTGTTGACTCCGCTAAGAACAGGGGACTTGTTGTTCTGCTTCATGGTCTGA 641
Query 472 ACGAACACAGTGGCAGGTATAGTGATTTTGCAAAGCAGCTAAATGTTAATGGATTCAAGG 531
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 642 ACGAACACAGTGGCAGGTATAGTGATTTTGCAAAGCAGCTAAATGTAAATGGATTCAAGG 701
Query 532 TCTATGGAATAGATTGGATCGGTCATGGTGGAAGCGATGGACTTCATGCTTACGTTGCTT 591
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 702 TCTATGGAATAGATTGGATCGGTCATGGTGGAAGCGATGGACTTCATGCTTACGTTCCTT 761
Query 592 CTCTTGATTATGCTGTCGCTGATTTGAAATCGTTTCTTGAGAAGGTAATTGCGGAAAACC 651
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 762 CTCTTGATTATGCTGTCGCTGATTTGAAATCGTTTATTGAGAAGGTAATTGCGGAAAACC 821
Query 652 CGGGATTGCCCTGTTTCTGCATTGGCCACTCAACAGGAGGAGCCATAATCTTAAAGGCCA 711
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 822 CGGGATTGCCCTGTTTCTGCATTGGCCACTCAACAGGAGGAGCCATCATCTTAAAGGCTA 881
Query 712 TGCTAGATGCAAAGATTGAAGCTCGAGTTTCAGGGATTGTGCTAACTTCACCCGCAGTTG 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 882 TGCTAGATGCAAAGATTGAAGCTCGAGTTTCAGGGATTGTGCTAACTTCACCCGCAGTTG 941
Query 772 GAGTCCAACCAACTTATCCTATCTTCGGCGTAATTGCACCAGTCCTCTCGTTCCTCATAC 831
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 942 GAGTCCAACCAACTTATCCTATCTTCGGCGTAATTGCACCATTCCTCTCGTTCCTCATAC 1001
Query 832 CGAGATATCAGTTAAGTGCTGCAAAAAAGAAAATAATGCCGGTTTCTCGTGACCCGGAAG 891
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1002 CGAGATATCAGTTAAGTGCTGCGAAAAAGAAAATAATGCCGGTTTCTCGTGACCCGGAAG 1061
Query 892 CTCTATTGGCTAAATACTCTGACCCACTAGTCTACACTGGATTTATCCGAGCAAGAACCG 951
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1062 CTCTATTGGCTAAATACTCTGACCCGCTAGTCTACACTGGATTTATCCGAGCAAGAACCG 1121
Query 952 GTAACGAGATCCTTAGACTTGGTGCTCATTTACTGCAGAATCTGAACAGAATCAAGGTTC 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1122 GTAACGAGATCCTTAGACTTGGTGCTCATTTACTGCAGAATCTGAACAGAATCAAGGTTC 1181
Query 1012 CGTTTCTTGTGATGCACGGCACAGCTGATACAGTTACTGATCCTAAAGGTACCCAAAAGC 1071
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1182 CGTTTCTTGTGATGCACGGCACAGCTGATACAGTTACTGATCCTAAAGGTACTCAGAAGC 1241
Query 1072 TATACAACGAGGCTTCCTCGTCCGATAAGTCGATCAAGCTGTACGATGGGTTGTTACACG 1131
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1242 TATACAATGAGGCTTCCTCATCCGATAAGTCGATCAAGCTGTACGACGGGTTGTTACACG 1301
Query 1132 ATCTGCTCTTTGAACCAGAACGAGAAACTATCGCTGGAGTCATATTGGATTGGCTAAACC 1191
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1302 ATCTGCTCTTTGAACCAGAACGGGAAACTATAGCTGGAGTCATATTGGATTGGCTAAACC 1361
Query 1192 GGCGGGTTTAAA 1203
||||||||||||
Sbjct 1362 GGCGGGTTTAAA 1373
Score = 134 bits (72), Expect = 3e-30
Identities = 78/81 (96%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 1 TCTTTGAATTCTCTTTGTTTATGATCTGTTCAAGTAAAGGAACGGTCGTATTTGCTACTG 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 204 TCTTTGAATTCTCTTTGTTTATGATCTGTTCAAGTAAAGGAACGGTCGTAATTGCTACTA 263
Query 61 GAAACTCATTTCCCAGATTAC 81
||| |||||||||||||||||
Sbjct 264 GAAGCTCATTTCCCAGATTAC 284
> AT1G73480.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:27628939-27632806 FORWARD LENGTH=2039
Length=2039
Score = 758 bits (410), Expect = 0.0
Identities = 773/945 (82%), Gaps = 37/945 (4%)
Strand=Plus/Plus
Query 274 CGGTGGTTGATGATGAAGTGGCGGTTAGACG-GAATTTGGCAATGAGGCGCGTTTTGGAG 332
||||||| |||| || || || ||| |||| ||| |||| || | ||| |||||||||
Sbjct 794 CGGTGGTGGATGGGGAGGTTGCTGTTCGACGTGAA-CTGGCGATTAAGCGAGTTTTGGAG 852
Query 333 GAT-AACGGTGGCGATGGAAGCTCCGTCAGAGATT-TCTCGCTATTCACGACCAAGAGAG 390
||| || || ||||||||||||||||||||||||| | |||||||||||||| |||||||
Sbjct 853 GATGAA-GGCGGCGATGGAAGCTCCGTCAGAGATTAT-TCGCTATTCACGACGAAGAGAG 910
Query 391 GTGACACGTTGTTCACTCAGTCATGGACACCTGTTGACTCCGCTAAGAACAGGGGACTTG 450
| || |||||||| | |||||||||| ||||| || ||| | || |||||||||||
Sbjct 911 GAGATACGTTGTTTAGTCAGTCATGGTCACCTCTT---TCCCCAAATCACAGGGGACTTA 967
Query 451 TTGTTCTGCTACATGG-TCTGAACGAACACAGTGGCAGGTATAGTGATTTTGCAAAGCAG 509
|||||||||||||||| | | ||||| || ||||||||||||||||||||||||||||||
Sbjct 968 TTGTTCTGCTACATGGAT-TAAACGAGCATAGTGGCAGGTATAGTGATTTTGCAAAGCAG 1026
Query 510 CTAAATGTTAATGGATTCAAGGTCTATGGAATAGATTGGATCGGTCATGGTGGAAGCGAT 569
|| |||| |||||| ||||||||||||||||| || |||||||||||||| ||||| |||
Sbjct 1027 CTTAATGCTAATGGGTTCAAGGTCTATGGAATTGACTGGATCGGTCATGGCGGAAGTGAT 1086
Query 570 GGACTTCATGCTTACGTTGCTTCTCTTGATTATGCTGTCGCTGATTTGAAATCGTTTCTT 629
|||||||||||||||||| |||| |||||||| |||||| | ||||||||||| ||||||
Sbjct 1087 GGACTTCATGCTTACGTTCCTTCCCTTGATTACGCTGTCACAGATTTGAAATCATTTCTT 1146
Query 630 GAGAAGGTAATTG-CGGAAAACCCGGGATTGCCCTGTTTCTGCATTGGCCACTCAACAGG 688
|| |||||| || | || || || ||| | |||||||||||| |||| |||||||||||
Sbjct 1147 GAAAAGGTA-TTCACAGAGAATCCAGGACTCCCCTGTTTCTGCTTTGGACACTCAACAGG 1205
Query 689 AGGAGCCATAATCTTAAAGGCCATGCTAGATGCAAAGATTGAAGCTCGAGTTTCAGGGAT 748
||||| || ||| | ||||| ||||| ||| ||||||||||| ||||||||||||| ||
Sbjct 1206 TGGAGCAATCATCCTCAAGGCTATGCTGGATCCAAAGATTGAATCTCGAGTTTCAGGCAT 1265
Query 749 TGTGCTAACTTCACCCGCAGTTGGAGTCCAACCAACTTATCCTATCTTCGGC-GTAATTG 807
|| | |||||||| || ||||||||||||||| | |||| ||||||| | || |||
Sbjct 1266 TGCATTGACTTCACCAGCTGTTGGAGTCCAACCATCCCATCCAATCTTCG-CTGTTCTTG 1324
Query 808 CACCAGTCCTCTCGTTCCT-CATACCGAGATATCAGTTAAGTGCTGCAAAAAAGAAAATA 866
| ||| || | |||| || | |||| || || || | ||||| ||||| |||||| |
Sbjct 1325 CTCCAATCATGGCGTTTCTAC-TACCCAGGTACCAAATCAGTGCAGCAAACAAGAAAGGA 1383
Query 867 ATGCCGGTTTCTCGTGACCCGGAAGCTCT-ATTGGCTAAATACTCTGACCCACTAGTCTA 925
|||||||||||||||||||| | |||||| || | | ||||||||||||||| ||||||
Sbjct 1384 ATGCCGGTTTCTCGTGACCCAGCAGCTCTCATCGCC-AAATACTCTGACCCATTAGTCTT 1442
Query 926 CACTGGATTTATCCGAGC-AAGAACCGG-TAACGAGATCCTTAGACTTGGTGCTCATTTA 983
||| |||| ||||| | || |||||| || ||||||||||||| | |||||| ||
Sbjct 1443 CACCGGATCCATCCGGGTTAA-AACCGGCTA-CGAGATCCTTAGAATCACTGCTCACTTG 1500
Query 984 CTGCAGAATCTGAACAGAA-TCAAGGTTCCGTTTCTTGTGATGCACGGCACAG-CTGATA 1041
| ||||| ||||||| || | || ||||| ||||||||||||||||| || | | || |
Sbjct 1501 CAACAGAACCTGAACA-AAGTGAAAGTTCCCTTTCTTGTGATGCACGGTACTGAC-GACA 1558
Query 1042 CAGTTACTGATCCTAAAGGTACC-CAAA-A-GCTATACAACGAGGCTTCCTCGTCCGATA 1098
||||||| ||||||| | || |||| | ||| ||| | || ||| ||||||| || |
Sbjct 1559 CAGTTACCGATCCTAGCG---CCTCAAAGAAGCTCTACGAGGAAGCTGCCTCGTCAGACA 1615
Query 1099 AGTCGA-TCAAGCTGTACGATGGGTTGTTACACGATCTGCTCTTTGAACCAGAACGAGAA 1157
| || | ||||||| ||||| |||||||| |||||||| || |||||||| |||||||||
Sbjct 1616 AATC-ACTCAAGCTCTACGACGGGTTGTTGCACGATCTTCTTTTTGAACCCGAACGAGAA 1674
Query 1158 A-CTATCGCTGGAGTCATATTGGATTGGCTAAACCGGCGGGTTTA 1201
| | |||||||||| |||||| ||||||||||||| |||||||||
Sbjct 1675 ATC-ATCGCTGGAGCCATATTAGATTGGCTAAACCAGCGGGTTTA 1718
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60140252910
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5