BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921075 Length=1087 Score E Sequences producing significant alignments: (Bits) Value AT1G21070.1 | Symbols: | Nucleotide-sugar transporter family p... 1770 0.0 AT1G76670.1 | Symbols: | Nucleotide-sugar transporter family p... 1131 0.0 AT4G27052.1 | Symbols: | unknown pseudogene | chr4:13579080-13... 119 6e-26 > AT1G21070.1 | Symbols: | Nucleotide-sugar transporter family protein | chr1:7375869-7378147 REVERSE LENGTH=1663 Length=1663 Score = 1770 bits (958), Expect = 0.0 Identities = 1038/1077 (96%), Gaps = 4/1077 (0%) Strand=Plus/Plus Query 14 AATCCAAATGGAG-AAGACAGAGAACGAGAAGAAGCCATCGGCGGTATCTGACGTCGGAG 72 ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 331 AATCCAAATGGAGAAAG-CAGAGAACGAGAAGAAGCCATCGGCTGTATCTGACGTCGGAG 389 Query 73 CATGGGCTATGAACGTAACGAGCTCCGTTGGGATCATCATGGCGAATAAACAACTAATGT 132 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 390 CATGGGCTATGAACGTAACGAGCTCCGTTGGGATCATCATGGCTAATAAACAACTAATGT 449 Query 133 CATCATCTGGTTTCGGCTTTAGCTTCGCGACAACTCTCACGGGATTTCACTTTGCTCTCA 192 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 450 CATCATCTGGATTCGGCTTCAGCTTCGCGACAACTCTCACGGGATTTCACTTTGCTCTTA 509 Query 193 CTGCTCTCGTTGGTATGGTGTCAAACGCGACTGGTTTATCTGCATCTAAGCATGTTCCTC 252 |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct 510 CTGCTCTCGTTGGTATGGTGTCGAATGCGACTGGTTTATCAGCATCTAAGCATGTTCCTC 569 Query 253 TTTGGGAGCTTCTTTGGTTCTCACTCGTTGCTAATATCTCAATCGCTGCTATGAATTTTA 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 TTTGGGAGCTTCTTTGGTTCTCACTCGTTGCTAATATCTCAATCGCTGCTATGAATTTTA 629 Query 313 GTCTCATGTTGAACTCTGTTGGTTTCTACCAGATTTCGAAATTGAGCATGATTCCGGTTG 372 |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| Sbjct 630 GTCTTATGTTGAACTCTGTTGGCTTCTACCAGATATCGAAATTGAGCATGATTCCAGTTG 689 Query 373 TTTGCGTGATGGAATGGGTACTACATAGTAAGCATTACTCGAGAGAAGTGAAGGCATCTG 432 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 690 TTTGTGTGATGGAATGGGTTCTACATAGTAAGCATTACTCGAGAGAAGTGAAGGCATCTG 749 Query 433 TCATGGTTGTGGTTGTAGGAGTTGGGATTTGTACTGTGACTGATGTCAAAGTTAATGCCA 492 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 750 TCATGGTTGTTGTTGTAGGAGTTGGGATTTGTACTGTTACTGATGTCAAAGTTAATGCCA 809 Query 493 AAGGTTTCATTTGTGCTTGCACTGCCGTTTTCTCCACTTCTCTCCAGCAGATCTCAATAG 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 810 AAGGTTTCATTTGTGCTTGCACTGCCGTTTTCTCCACTTCTCTCCAGCAGATCTCAATAG 869 Query 553 GTTCACTGCAGAAGAAATACTCAATCGGATCTTTTGAGTTGCTGAGCAAAACAGCTCCAA 612 |||||||||||||||||||||| |||||||| || ||||||||||| || |||||||||| Sbjct 870 GTTCACTGCAGAAGAAATACTCGATCGGATCATTCGAGTTGCTGAGTAAGACAGCTCCAA 929 Query 613 TCCAAGCCATTTCACTCCTCATCTTTGGTCCATTTGTTGACTATTTCTTGAGTGGCAGAT 672 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 930 TCCAAGCCATTTCACTCCTCATCTTTGGTCCATTTGTTGACTATTTCTTGAGTGGCAGAT 989 Query 673 TCATTTCTACTTACAAGATGACTTATGGCGCAATGTTATGCATTCTTCTCTCCTGCGCAC 732 ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 990 TCATTTCGACTTACAAGATGACTTATAGCGCAATGTTATGCATTCTTCTCTCCTGCGCAT 1049 Query 733 TGGCGGTTTTCTGCAACATTAGCCAATATCTCTGCATCGGCAGATTCTCCGCTACTTCCT 792 ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| || | Sbjct 1050 TGGCGGTTTTCTGCAACATAAGCCAATATCTCTGCATCGGAAGATTCTCTGCTACCTCAT 1109 Query 793 TCCAAGTTCTTGGCCACATGAAAACAGTCTGTGTCTTAACACTGGGATGGCTTATCTTTG 852 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 1110 TCCAAGTTCTTGGCCACATGAAAACAGTCTGTGTCTTAACATTAGGATGGCTTATCTTTG 1169 Query 853 ATTCCGAGATGACATTCAAGAACATAGCAGGGATGGTCTTAGCTGTGGTGGGAATGGTGA 912 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1170 ATTCGGAGATGACATTCAAGAACATAGCAGGGATGGTCTTAGCCGTGGTGGGAATGGTGA 1229 Query 913 TATACAGTTGGGCAGTCGAGTTAGAGAAACAGAGAAAGTCGAAAGTGACACCGCATGGTA 972 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1230 TATACAGTTGGGCAGTCGAGTTAGAGAAACAGAGAAAGTCGAAAGTGATACCGCATGGTA 1289 Query 973 AACACAGTATGACAGAAGATGAGATTAAACTTCTCAAAGAAGGTATAGAACATATGGATT 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1290 AACACAGTATGACAGAAGATGAGATTAAACTTCTCAAAGAAGGTATAGAACATATGGATT 1349 Query 1033 TGAAAGACATGGAGCTTGGAAATAATAAAGCATAAATAAAGCT--ATTCAAGAGAAA 1087 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 1350 TGAAAGACATGGAGCTTGGAAATAATAAAGCATAAATATAGCTCTATTCAAGAGAAA 1406 > AT1G76670.1 | Symbols: | Nucleotide-sugar transporter family protein | chr1:28772600-28774901 REVERSE LENGTH=1666 Length=1666 Score = 1131 bits (612), Expect = 0.0 Identities = 908/1050 (86%), Gaps = 23/1050 (2%) Strand=Plus/Plus Query 1 TTCAA-TTTCGTAAAATCCAAATGGAGAAGA-CAGAGAACGAGAAGAAGCCATCGGCGGT 58 ||||| |||| | |||||||||||||||| | | |||| ||||||||| ||||||||| Sbjct 313 TTCAATTTTC-TCAAATCCAAATGGAGAA-ACCGGAGAGCGAGAAGAA---ATCGGCGGT 367 Query 59 ATCTGACGTCGGAGCATGGGCTATGAACGTAA-CGAGCTCCGTTGGGATCATCATGGCGA 117 ||||| ||||| |||||||||||||| |||| | ||||||||||| ||||||||||| | Sbjct 368 GTCTGATGTCGGTGCATGGGCTATGAATGTAATC-AGCTCCGTTGGAATCATCATGGCTA 426 Query 118 ATAAACAACTAATGTCATCATCTGGTTTCGGCTTTAGCTTCGCGACAAC-TCTCACGGGA 176 ||||||| || ||||| || ||||||||||| ||| |||| || ||||| | | |||||| Sbjct 427 ATAAACAGCTCATGTCTTCCTCTGGTTTCGGTTTTGGCTTTGCTACAACGT-TAACGGGA 485 Query 177 TTTCACTTTGC-TCTCACTGCTCTCGTTGGTATGGTGTCAAACGCGACTGGTTTATCTGC 235 ||||||||||| | |||||||||| |||||||||||||||||||| || || |||| || Sbjct 486 TTTCACTTTGCAT-TCACTGCTCTTGTTGGTATGGTGTCAAACGCAACGGGACTATCAGC 544 Query 236 ATCTAAGCATGTTCCTCTTTGGGAGCTTCTTTGGTTCTCACTCGTTGCTAATATCTCAAT 295 ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| || Sbjct 545 TTCTAAGCATGTTCCTCTTTGGGAGCTTCTCTGGTTCTCAATTGTTGCTAATATCTCTAT 604 Query 296 CGCTGCTATGAATTTTAGTCTCATGTTGAACTCTGTTGGTTTCTACCAGATTTCGAAATT 355 |||||||||||| |||||||| ||| | ||||||||||| ||||| |||||||||||||| Sbjct 605 CGCTGCTATGAACTTTAGTCTTATGCTCAACTCTGTTGGCTTCTATCAGATTTCGAAATT 664 Query 356 GAGCATGATTCCGGTTGTTTGCGTGATGGAATGGGTACTACATAGTAAGCATTACTCG-A 414 ||||||||||||||| || |||||| |||||||| | |||||||| |||||||| | | | Sbjct 665 GAGCATGATTCCGGTGGTATGCGTGTTGGAATGGATTCTACATAGCAAGCATTA-TTGTA 723 Query 415 GAGAAGTGAAGGCATCTGTCATGGTTGTGGTTGTAGGAGTTGGGATTTGTACTGTGACTG 474 ||||||||| || ||||| |||||||||||| | || |||||||||||||||||||||| Sbjct 724 AAGAAGTGAAAGCTTCTGTAATGGTTGTGGTTATCGGTGTTGGGATTTGTACTGTGACTG 783 Query 475 ATGTCAAAGTTAATGCCAAAGGTTTCATTTGTGCTTGCACTGCCGTTTTCTCCACTTCTC 534 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 784 ATGTCAAAGTTAATGCCAAAGGTTTCATTTGTGCATGCACTGCCGTTTTCTCCACTTCTC 843 Query 535 TCCAGCAGATCTCAATAGGTTCACTGCAGAAGAAATACTCAATCGGATCTTTTGAGTTGC 594 | |||||||| || ||||| || ||||||||||| |||||| | ||||| ||||| |||| Sbjct 844 TGCAGCAGATTTCTATAGGCTCTCTGCAGAAGAAGTACTCAGTAGGATCCTTTGAATTGC 903 Query 595 TGAGCAAAACAGCTCCAATCCAAGCCATTTCACTCCTCATCTTTGGTCCATTTGTTGACT 654 |||||||||| || |||||||||||||||||||| ||||||| ||| || |||||||||| Sbjct 904 TGAGCAAAACTGCACCAATCCAAGCCATTTCACTTCTCATCTGTGGCCCCTTTGTTGACT 963 Query 655 ATTTCTTGAGTGGCAGATTCATTTCTACTTACAAGATGACTTATGGCGCAATGTTATGCA 714 |||| ||||| |||| |||||| ||||||||| ||||||||||||| || || || |||| Sbjct 964 ATTTGTTGAGCGGCAAATTCATATCTACTTACCAGATGACTTATGGTGCCATCTTCTGCA 1023 Query 715 TTCTTCTCTCCTGCGCACTGGCGGTTTTCTGCAACATTAGCCAATATCTCTGCATCGGCA 774 ||||||||||||| ||| | || |||||||| ||||| |||||||||||||||||||| | Sbjct 1024 TTCTTCTCTCCTGTGCATTAGCCGTTTTCTGTAACATAAGCCAATATCTCTGCATCGGAA 1083 Query 775 GATTCTCCGCTACTTCCTTCCAAGTTCTTGGCCACATGAAAACAGTCTGTGTCTTAACAC 834 ||||||| || || || ||||||||||| ||||||||||||||||| || ||| | ||| Sbjct 1084 GATTCTCAGCGACATCTTTCCAAGTTCTAGGCCACATGAAAACAGTATGCGTCCTCACAT 1143 Query 835 TGGGATGGCTTATCTTTGATTCCGAGATGACATTCAAGAACATAGCAGGGATGGTCTTAG 894 | ||||||||| ||||||||||||||||||||||||||||||| || ||||||| | ||| Sbjct 1144 TAGGATGGCTTCTCTTTGATTCCGAGATGACATTCAAGAACATCGCCGGGATGGCCATAG 1203 Query 895 CTGTGGTGGGAATGGTGATATACAGTTGGGCAGTCGAGT-TAGAGAAACAGAGAAA-GTC 952 | | || ||||||||||| || |||||||| || || | ||||||||||||| || | | Sbjct 1204 CCATTGTTGGAATGGTGATCTATAGTTGGGCTGTTGA-TATAGAGAAACAGAGGAACG-C 1261 Query 953 GAAAGTGA-CACCGCATGGTAAACACAGTATGACAGAAGATGAGATTAAACTTCTCAAAG 1011 ||||| | | || || || |||||||||||||| |||||||||||||| || ||||||| Sbjct 1262 -AAAGTCAACGCCACACGGCAAACACAGTATGACCGAAGATGAGATTAAGCTACTCAAAG 1320 Query 1012 AAGGTA-TAGAACATATGGATTTGAAAGAC 1040 |||| | | || ||||| || ||||||||| Sbjct 1321 AAGG-AGTTGAGCATATCGACTTGAAAGAC 1349 > AT4G27052.1 | Symbols: | unknown pseudogene | chr4:13579080-13579310 FORWARD LENGTH=231 Length=231 Score = 119 bits (64), Expect = 6e-26 Identities = 88/98 (90%), Gaps = 7/98 (7%) Strand=Plus/Plus Query 423 AAGGCATCTGTCATGGTTGTGGTTGTA-G-GAGTTGGGATTTGTACTGTGACTGATGTCA 480 ||||||||||| ||||||||||||||| | ||||||||||||||| | ||||||| | Sbjct 85 AAGGCATCTGTGATGGTTGTGGTTGTAGGAGAGTTGGGATTTGTA----G-CTGATGTTA 139 Query 481 AAGTTAATGCCAAAGGTTTCATTTGTGCTTGCACTGCC 518 | |||||||||||||||||||||||||||||||||||| Sbjct 140 AGGTTAATGCCAAAGGTTTCATTTGTGCTTGCACTGCC 177 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53262778245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5