BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921105 Length=827 Score E Sequences producing significant alignments: (Bits) Value AT1G21340.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 1188 0.0 AT4G00940.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 111 8e-24 > AT1G21340.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:7476087-7476869 FORWARD LENGTH=783 Length=783 Score = 1188 bits (643), Expect = 0.0 Identities = 741/788 (94%), Gaps = 7/788 (1%) Strand=Plus/Plus Query 22 ATGTTGCCGTACATTGGACACAACAGCTACCTGCAGCAGCACCAGTTTCCGTCGCCGGAG 81 ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| Sbjct 1 ATGTTGCCGTACATTGGACACAACAGCTA-C--CAGCAGCACCAGTTTCCGTTGCCGGAG 57 Query 82 ATGGAAATTCCGGAGAAATGGAAGCTTTCGTATGGACAAGAGGCTACTACTGCTCCGGCT 141 ||||||||||||||||| ||||||||||| || | ||||||||||| ||||||||||||| Sbjct 58 ATGGAAATTCCGGAGAAGTGGAAGCTTTCTTACGAACAAGAGGCTATTACTGCTCCGGCT 117 Query 142 TGTCCTCGTTGTGCATCGTCCAACACCAAGTTTTGTTATTACAACAACTACAGCTTGTCT 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 TGTCCTCGTTGTGCATCGTCCAACACCAAGTTTTGTTATTACAACAACTACAGCTTGTCT 177 Query 202 CAGCCTAGATACTTCTGCAAGGGTTGCCGTCGTTACTGGACTAAAGGCGGTTCTCTCCGT 261 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 178 CAGCCTAGATACTTCTGCAAGGGTTGCCGTCGTTACTGGACGAAAGGCGGTTCTCTCCGC 237 Query 262 AACATTCCTGTAGGTGGAGGCTGTCGCAAGAGAAGCCGCAGCAGACAGAACAGTCACAAA 321 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 238 AACATTCCTGTAGGTGGAGGCTGTCGCAAGAGAAGTCGAAGCAGACAGAACAGTCACAAA 297 Query 322 AGGTTTGGTCGGAACGAGAATCGGCCTGATGGTCTTAATAACCAAGATGATGGATTACAG 381 |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||| Sbjct 298 AGGTTTGGCCGGAACGAGAATCGGCCAGATGGTCTTATTAACCAAGATGATGGATTCCAG 357 Query 382 TCCAGCCCTCCTGGTCCTGATATTGATTTGGCTGCGGTTTTCGCACAGTACGTGACTGAT 441 ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||| Sbjct 358 TCCAGCCCTCCTGGTTCTGATATTGATTTGGCTGCGGTTTTCGCACAATATGTGACTGAT 417 Query 442 GGGAGCCCTTCTAGTACAGATAATACTACTGGATCCGAGCAAGATTCACCGATAACAACA 501 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 418 CGGAGCCCTTCTAGTACAGATAATACTACTGGATCCGATCAAGATTCACCGATAACAACA 477 Query 502 ACAACTCATACTTTAGATTCCTTGAGCTGGGATATCTGCCAAGAAACTGATGTGGATCTT 561 || |||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct 478 ACCACTCATGCTTTAGAATCTTTGAGTTGGGATATCTGCCAAGAAACTGATGTGGATCTT 537 Query 562 GGATTCTACGAGGAGTTCAATAATCTAAC-CAAGAAGACCGAAGAAGATCAACGAGGG-T 619 |||||||||| ||| |||||||||||||| || ||||||| |||| |||||| || | | Sbjct 538 GGATTCTACGGGGAATTCAATAATCTAACTCA-GAAGACCAAAGAGGATCAA-GAAGTAT 595 Query 620 TTGGTCAACTTCTTGAAGATGATCGAGAGGAGATCTTCGAGTTCCAGGGTTTACTCGATG 679 ||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 596 TTGGTCAGTTTCTCCAAGAAGATCGAGAGGAGATCTTCGAGTTCCAGGGTTTACTCGATG 655 Query 680 ACAAAGAGATTCAAGAGATCCTGGAATGTTCATTCTCAGAGGAGCCAGACCAGTTAATTT 739 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 656 ACAAAGAGATTCAAGAGATCCTGGAATGCTCATTCTCAGAGGAGCCAGACCAGTTAGTTT 715 Query 740 CTCAGGGGAGCTTCATGGTCAATGGTGATAATTGGAGTTCAACAGATCTTACCAGATTCG 799 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| Sbjct 716 CTCAGGGGAGCTTCATGATCAATGGTGATAACTGGAGTTCAACAGATCTTACCAGGTTCG 775 Query 800 GGATTTGA 807 |||||||| Sbjct 776 GGATTTGA 783 > AT4G00940.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr4:403320-404810 REVERSE LENGTH=970 Length=970 Score = 111 bits (60), Expect = 8e-24 Identities = 101/121 (83%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 162 CAACACCAAGTTTTGTTATTACAACAACTACAGCTT-GTCTCAGCCTAGATACTTCTGCA 220 |||||||||||||||||||||||||||||||||||| | | |||||||| ||||| || | Sbjct 313 CAACACCAAGTTTTGTTATTACAACAACTACAGCTTAG-CACAGCCTAGGTACTTGTGTA 371 Query 221 AGGGTTGCCGTCGTTACTGGACTAAAGGCGGTTCTCTCCGTAACATTCCTGTAGGTGGAG 280 || ||| || | || |||||| |||| || |||||||||||| | || ||||| |||| Sbjct 372 AGTCTTGTCGGAGATATTGGACTGAAGGTGGCTCTCTCCGTAACGTCCCCGTAGGCGGAG 431 Query 281 G 281 | Sbjct 432 G 432 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40287785894 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5