BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921163 Length=1023 Score E Sequences producing significant alignments: (Bits) Value AT1G21780.1 | Symbols: | BTB/POZ domain-containing protein | c... 1596 0.0 > AT1G21780.1 | Symbols: | BTB/POZ domain-containing protein | chr1:7652029-7654014 FORWARD LENGTH=1478 Length=1478 Score = 1596 bits (864), Expect = 0.0 Identities = 961/1009 (95%), Gaps = 1/1009 (0%) Strand=Plus/Plus Query 10 agagagagTGGATGGGGGACACGAAGGTGGAGACAATCTCGAGGTTAGCTCAATGGAGGA 69 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 339 AGAGAAAGTGGATGGGGGACACGAAGGTAGAGACAATCTCGAGGTTAGCTCAATGGAGAA 398 Query 70 TTGAAAATTTTGGACCTTGTTCTTTCAAAAAGTCCGATCCTTTTAAAGTCGGAATTTGGA 129 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 399 TTGAAAATTTTGGTCCTTGTTCTTTCAAAAAGTCCGATCCTTTCAAAGTCGGAATTTGGA 458 Query 130 ATTGGCATCTGTCTATAGAGAGGAATCGTTATCTATCAGTGAGGCTTTTCCCAGAGCTTT 189 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||| Sbjct 459 ATTGGCATCTGTCTATAGAGAGGAATCGCTATCTATCAGTGAGGCTATTCCCAGAACTTT 518 Query 190 CTCGAGTATCTAAAGAGCAACCTCCTGTTGCCAAATTTGTTCTTCGTGTCTCCAACGTTG 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 519 CTCGAGTATCTAAAGAGCAACCTCCTGTTGCCAAATTTGTTCTTCGTGTCTCCAACGTTG 578 Query 250 GTCCTAATCGTAGATTCTACATCTCTCCTGTGTATGAAAAACTGTTGCGTACAACTGATG 309 | || |||||||||||||||||||||||||| ||||| || ||| ||||||||||||||| Sbjct 579 GCCCCAATCGTAGATTCTACATCTCTCCTGTTTATGAGAAGCTGCTGCGTACAACTGATG 638 Query 310 ATTGTGTGTGGCATGTGGACTCCAGCTTCCATGGTCGATTCACCATTGATGTCGAATTTC 369 |||||||||||||||| |||||||| ||||| |||||||||||||||||||| || |||| Sbjct 639 ATTGTGTGTGGCATGTTGACTCCAGTTTCCACGGTCGATTCACCATTGATGTTGAGTTTC 698 Query 370 TGGATCTCAAAATCTGCCCTTTGAATGGTGGTGAAGCTTCTCCTGTTTGGCCAACCGATT 429 | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 699 TTGATCTCAAAATCTGCCCTGTGAATGGTGGTGAAGCTTCTCCTGTTTGGCCAACCGATG 758 Query 430 CAACAATGCAATCAATCTCGACTCAAACCACTCTCAAATGCTTATCCCGGATGCTAGAGG 489 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 759 CAACAATGCAATCAATCTCTACTCAAACCACTCTCAAATGCTTATCCCGGATGCTAGAGG 818 Query 490 AAAGCATCCTAACCGATGTAATCATCCACACAGCCGATGGAACACTCTCTGCTCACAAAG 549 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 819 AAAGCATACTAACCGATGTAATCATCCACACAGCCGATGGAACACTCTCTGCTCACAAAG 878 Query 550 CTATCCTCTCGGCTAGCTCTACCGTTTTCAAAAGCATGTTCCACCACGACCTCAAGGAAA 609 |||||||||| |||||||| || ||||||||||||||||||||||||||||||| ||||| Sbjct 879 CTATCCTCTCAGCTAGCTCAACTGTTTTCAAAAGCATGTTCCACCACGACCTCATGGAAA 938 Query 610 AAGAATCATCCACAATCCACATCGACGACATGTCAAGAGAATCTTGCATGGCTCTACTAA 669 | |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 939 AGGAATCATCCACAATCCACATAGACGACATGTCGAGAGAATCTTGCATGGCTCTACTAA 998 Query 670 GTTACCTATACGGAAACATAACCCAAGAAGAGTTCTGGAAACACAGGCTTGCCCTACTCG 729 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 999 GTTACCTCTACGGAAACATAACCCAAGAAGAGTTCTGGAAACACAGGCTCGCCCTCCTCG 1058 Query 730 GTGCTGCAAACAAATACGACATAACGGATTTGAAAGCAGCGTGCGAGGAAAGCCTAATGG 789 | ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1059 GCGCTGCAAACAAGTACGACATAACGGATTTGAAAGCAGCCTGCGAGGAGAGCCTAATGG 1118 Query 790 AAGACATAAACTCGAGTAATGTGCTCGAGAGACTACAAGAAGCTTGGCTGTATCAGCTGG 849 |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 1119 AAGATATAAACTCGAGTAATGTGCTCGAGAGGCTACAAGAAGCTTGGCTTTATCAGCTGG 1178 Query 850 AGAAACTGAAGAAAGGGTGTCTGATGTATTTGTTTGATTTCGGAAAGATATATGATGTCA 909 |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 1179 AGAAACTGAAGAAAGGGTGTTTGATGTATTTGTTTGATTTCGGAAAGATTTATGATGTCA 1238 Query 910 GAGAAGAAATCAGCAATTTCTTCAGGCAAGCTGATCGAGAACTGATGTTGGAGATGTTTC 969 ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1239 GAGAAGAAATCAGCAGTTTCTTCAGGCAAGCTGATCGAGAACTGATGCTGGAGATGTTTC 1298 Query 970 AAGAGGTTTTGTCCGTGTGGAAACCGGTCTAATATACT-TTACACACAT 1017 ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 1299 AAGAGGTTTTGTCTGTGTGGAAACCGGTCTAATATACACTTACACACAT 1347 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50133678706 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5