BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921171 Length=327 Score E Sequences producing significant alignments: (Bits) Value AT1G21864.1 | Symbols: | Plant thionin family protein | chr1:7... 405 1e-112 AT1G21866.1 | Symbols: | Plant thionin family protein | chr1:7... 374 4e-103 > AT1G21864.1 | Symbols: | Plant thionin family protein | chr1:7675502-7675971 FORWARD LENGTH=470 Length=470 Score = 405 bits (219), Expect = 1e-112 Identities = 294/330 (89%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 1 TTTGCAGACTCACGATACTTACGACATGGCAGCTCCAA-TGTCAAAGAAAATCTG-CAGT 58 ||||||||||||| |||||||||||||||||| | ||| ||||||||||||| || | || Sbjct 39 TTTGCAGACTCACAATACTTACGACATGGCAG-TTCAAGTGTCAAAGAAAATTTGTC-GT 96 Query 59 GTATTGATAATTGCAATTTTATTTGCAACGATGTTTTCAGCTCATTCCAACTCGATAGAT 118 |||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 97 GTATTGATGATTGTAATTTTATTTGCAATGATGTTTTCAGCTCATTCCAACTCGATAGAT 156 Query 119 GTGTGTGTCAAAGATTGTGTCGTGAATGTGTGCATGAAAGCATCaaaaaaaGCGACTCCA 178 |||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||| Sbjct 157 GTGTGTGTCAAAAATTGTGGCGTGAACCAGTGCATGAAAGCATCAAAGAAAGCGACTCCA 216 Query 179 GCCATTTGTGACAATCCTTGCAAGATAATGTGTGATCCAATGAACGGTGAGCAATACATC 238 || || |||||||| ||||||||||| || |||||||| | ||| |||| ||||||| Sbjct 217 GCTATATGTGACAACCCTTGCAAGATTATATGTGATCCTCTCAACAACGAGCGATACATC 276 Query 239 GTCCCTCGAGGTAATGGTGGTCCTATCAAAAGGTTCTGCAGA-CGATTTAGCTGGATCTG 297 |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| || Sbjct 277 GTCCCTCGAGGTAATGGTGGTCCTATAAAAAGGTTCTGCAGAGC-ATTTAGCTGGATTTG 335 Query 298 TAACCCGTAAATGATCGAAATTACAAAAAT 327 || | ||||| ||||||| ||||||||||| Sbjct 336 TAGCGCGTAATTGATCGACATTACAAAAAT 365 > AT1G21866.1 | Symbols: | Plant thionin family protein | chr1:7677499-7677959 FORWARD LENGTH=461 Length=461 Score = 374 bits (202), Expect = 4e-103 Identities = 271/304 (89%), Gaps = 6/304 (2%) Strand=Plus/Plus Query 26 ATGGCAGCTCCAA-TGTCAAAGAAAATCTGCAGTGTATTGATAATTGCAATTTTATTTGC 84 |||||| || ||| |||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 1 ATGGCAACT-CAAGTGTCAAAGAAAATCTGCAGTGTATTGATGATTGTAATTTTATTTGC 59 Query 85 AACGATGTTTTCAGCTCATTCCAACTCGATAGATGTGTGTGTCAAAGATTGTGTCGTGAA 144 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 60 AATGATGTTTTCAGCTCATTCCAACTCGATAGATGTGTGTGTCAAAAATTGTGTCGTGAA 119 Query 145 TGTGTGCATGAAAGCATCaaaaaaaGCGACTCCAGCCATTTGTGACAATCCTTGCAAGAT 204 |||||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||| Sbjct 120 CCAGTGCATGAAAGCATCAAAGAAAGCGACTCCAGCCATATGTGCCAACCCTTGCAAGAT 179 Query 205 AATGTGTGATCCAATGAACGGTGAGCAATACATCGTCCCTCGAGGTAATGGTGGTCCTAT 264 || |||||||| | ||| |||| ||||||||||||||||||||||||||||||||| Sbjct 180 TATATGTGATCCTCTCAACAACGAGCGATACATCGTCCCTCGAGGTAATGGTGGTCCTAT 239 Query 265 CAAAAGGTTCTGCAGA-CGATTTAGCTGGATCTGTAACC-CGTAAATGATCGAAATTACA 322 ||||||||||||||| | |||||||||||| |||| || | ||| ||||| | |||||| Sbjct 240 AAAAAGGTTCTGCAGAGC-ATTTAGCTGGATTTGTA-CCGCTTAATTGATCCACATTACA 297 Query 323 AAAA 326 |||| Sbjct 298 AAAA 301 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15231127947 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5