BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921244
Length=2657
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22275.1 | Symbols: ZYP1b, ZYP1 | Myosin heavy chain-related... 3096 0.0
AT1G22260.1 | Symbols: ZYP1a, ZYP1 | Myosin heavy chain-related... 2933 0.0
> AT1G22275.1 | Symbols: ZYP1b, ZYP1 | Myosin heavy chain-related
protein | chr1:7867133-7872618 FORWARD LENGTH=2874
Length=2874
Score = 3096 bits (1676), Expect = 0.0
Identities = 1889/1994 (95%), Gaps = 6/1994 (0%)
Strand=Plus/Plus
Query 1 TCTCGAACTCCGATCTCGAGATGCAGAAATTAGGGTTTCCGGCGATGAAGAGCTTGGATC 60
|||||| ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 93 TCTCGATCTCCGATCTAGAGATGCAGAAGTTAGGGTTTCCGGCGATGAAGAGCTTTGATC 152
Query 61 AACTCCGATCGTTTTCTGGATCGGCGAAGACGTACTCCTTCTCCACTCGTCCGCCTCAGG 120
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 153 AACTCCGATCGTTGCCTGGATCGGCGAAGACGTACTTCTTCTCCACTCGTCCGCCTCAGG 212
Query 121 ATTCCGTCTCCTCCGGAAGTTTCTCGAATTTGAAACTCACTGCAGAGAAACTGGTGAAGG 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 213 ATTCCGTCTCCTCCGGAAGTTTCTCGAATTTGAAACTCACAGCAGAGAAACTGGTGAAGG 272
Query 181 ATCAGGCCGCTATGAGAACAGATCTAGAACTGGCGAATTGTAAGCTGAAAAAGTCACTGG 240
||||||| || |||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 273 ATCAGGCTGCGATGAGAACAGATCTCGAACTGGCGAATTGTAAGCTGAAAAAGTCAATGG 332
Query 241 AGCATGTCTATGCCTTAGAGGATAAACTTCAAAACGCTTTTAATGAGAATGCTAAGCTCA 300
|||||||||||||||||||||| ||||| || | ||||||||||||||||||||||||||
Sbjct 333 AGCATGTCTATGCCTTAGAGGAGAAACTGCAGAGCGCTTTTAATGAGAATGCTAAGCTCA 392
Query 301 GAGTTAGGCAAAAGGAAGATGAGAAGCTTTGGAGAGGATTGGAATCTAAGTTCTCTTCGA 360
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct 393 GAGTTAGGCAAAAGGAAGATGAGAAGCTGTGGAGAGGACTGGAATCTAAGTTCTCTTCAA 452
Query 361 CAAAGACTCTGTGTGATCAACTTACTGAGACTCTGCAGCATTTAGCTTCTCAAGTTCAGG 420
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 453 CGAAGACTCTGTGTGATCAACTTACTGAGACTCTGCAGCATTTGGCTTCTCAAGTTCAGG 512
Query 421 ATGCTGAGAAGGATAAAGttttttttGAGACCAAATTCAGTACTAGTTCAGAAGCAATAG 480
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 513 ATGCTGAGAAGGATAAAGGTTTTTTTGAGACCAAATTCAATACTAGTTCAGAAGCAATAA 572
Query 481 ACTCTTTAAACCAGCAAATGCGAGACATGTCTTTAAGATTAGTTACTGCTAAAGAAGAAA 540
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 573 ACTCTTTAAACCAGCAAATGCGAGACATGTCTTTAAGATTAGATGCTGCTAAAGAAGAAA 632
Query 541 TCACAAGCAGAGATAAGGAATTGGAGGAGCTCAAACTCGAGAAACAACAGAAGGAAATGT 600
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 633 TCACAAGCAGAGATAAGGAATTGGAGGAGCTCAAACTCGAGAAACAACACAAGGAAATGT 692
Query 601 TCTATCAAACTGAACGGTGCGGAACTGCCAGTCTCATTGAGAAGAAAGATGCTGTGATAA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 693 TCTATCAAACTGAACGGTGCGGAACTGCCAGTCTCATTGAGAAGAAAGATGCTGTGATAA 752
Query 661 CAAAGTTAGAAACAACTGCAGCCGAAAGAAAACTCAACATTGAAAACTTGAACTCCCAAC 720
|| |||| |||||||| ||||| |||||||||||||| |||||||| ||||| |||||||
Sbjct 753 CAGAGTTGGAAACAACCGCAGCTGAAAGAAAACTCAAAATTGAAAAATTGAATTCCCAAC 812
Query 721 TGGAAAAGCTACATCTTGAGTTAACAACAAAAGAAGACGAGGTCAAAGACCTTGTTAGTA 780
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 813 TGGAAAAGCTACATCTTGAGTTAACAACAAAAGAAGACGAGGTCATACACCTTGTTAGTA 872
Query 781 TCCAGGAGAAGTTGGAGAAAGAAAAGACGAGTGTTCAGTTGAGTGCAGATGAACTGTTTG 840
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 873 TCCAGGAGAAGTTGGAGAAAGAAAAGACGAATGTTCAGTTGAGTTCAGATGAACTGTTTG 932
Query 841 AAAAGCTTGTCAGCTCAGAGCAGGAGGTTAAGAAGCTCGATGAATTTGTCCACTACTTGG 900
|||| |||||| ||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 933 AAAAACTTGTCCGCTCAGAGCAGGAGGTTAAGAAGCTAGATGAATTAGTCCACTATTTGA 992
Query 901 TAGCTGAGTTGACTGAATTGGACAAAAAGAATCTGACCCTCAAGGGAAAGTTTGATAAAC 960
|||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||||||
Sbjct 993 TAGCTGAGCTGACTGAATTAGACAAAAAGAATCTGACCTTCAAGGAAAAGTTTGATAAAC 1052
Query 961 TAAGTGGCCTATATGATACCCACTTTATGTTGTCGCGAAAAGACAGAGATCTTGCATCAG 1020
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1053 TAAGTGGCCTATATGATACCCACTTTATGTTGTTGCGAAAAGACAGAGATCTTGCATCAG 1112
Query 1021 ATCGTGCTCAAAGATCGTTTGATCAACTCCAGGGCGAGTT-TTCTAGCA-TAACTGCCCA 1078
|||||||||| ||||||||||||||||||||||||||||| || ||| | || ||||| |
Sbjct 1113 ATCGTGCTCAGAGATCGTTTGATCAACTCCAGGGCGAGTTATT-TAG-AGTAGCTGCCGA 1170
Query 1079 AAAAGAAGCTCTGGAATCAACGA-GCAACGAACTAAGTGAAAAAATAGTTGTGCTCCAGA 1137
|||||||||||||||||| | | |||| || ||||||||||||||||||| ||||||||
Sbjct 1171 AAAAGAAGCTCTGGAATCTTC-AGGCAATGAGCTAAGTGAAAAAATAGTTGAGCTCCAGA 1229
Query 1138 ATGATAAAGAGTCTTTAATATCTCAACTTTCTGGGGTACGCTGCTCTGCAAGCCAGACCA 1197
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 ATGATAAGGAATCTTTAATATCTCAACTTTCTGGGGTACGCTGCTCTGCAAGCCAGACCA 1289
Query 1198 TTGATAAATTGGAGTCTGAAGCAAAAGAACTGGTTTTAAAGAATGCTGAAACAGAATCAG 1257
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1290 TTGATAAATTGGAGTTTGAAGCAAAAGGACTGGTTTTAAAGAATGCTGAAACAGAATCAG 1349
Query 1258 TGATTTCGAAGCTGAAAGAGGAAATAGAAACTTTATTGGAAAGTGTAAGGACATCAGCGG 1317
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1350 TGATTTCGAAGTTGAAAGAGGAAATAGATACTTTATTGGAAAGTGTAAGGACATCAGAGG 1409
Query 1318 ATAAGAAGCAAGAATTGTCATTAAAGCTTTCATCATTAGAGATGGAAAGCAAAGAGAAGT 1377
|||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct 1410 ATAAGAAGAAAGAATTGTCAATAAAGCTTTCATCATTAGAGATTGAAAGCAAAGATAAGT 1469
Query 1378 ACGAGACACTGCAGGCAGATGCACATAGACATGTTGGGGAACTAGAGACTTTGCAAAAAG 1437
|||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct 1470 ACGAGAAACTGCAGGCAGATGCACAAAGACAAGTTGGGGAACTAGAGACTTTGCAGAAAG 1529
Query 1438 AGAGTGAGAGCCATCAGCTGCAGGCGGATTTGTTGGCAAAAGAGGTGAACCAGCTCCAAA 1497
||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 1530 AGAGTGAGAGCCATCAGCTGCAGGCAGATTTATTGGCGAAAGAGGTGAACCAGCTCCAAA 1589
Query 1498 CCGTCATAGAGGAGAAAGGAAATCTTATCCTGCAGTGCAATGAAAACGAGAAGAATTTAA 1557
|| | |||||||||||||| |||| ||||| ||||||||||| |||||||||||| |||
Sbjct 1590 CCATTATAGAGGAGAAAGGGCATCTAATCCTCCAGTGCAATGAGAACGAGAAGAATATAA 1649
Query 1558 ACCAACAAATCATTAAGGACAAGGAGCTACTGGCAACTGCTGAAACTAAGCTTGCAGAAG 1617
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1650 ACCAACAAATCATTAAGGACAAGGAGCTACTCGCAACTGCTGAAACTAAGCTTGCAGAAG 1709
Query 1618 CAAAGAAGCAATATGACCTGATGCTAGAAAATAAACAGTTGGAATTGTCAAGGCACTTAA 1677
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1710 CAAAGAAGCAATATGACCTGATGCTAGAAAGTAAACAGTTGGAATTATCAAGGCACTTAA 1769
Query 1678 AAGAATTATCACAGAGGAATGACCAGGCAATTAATGATATCAGGAGGAAGTATGATGTAG 1737
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1770 AAGAATTATCACAGAGGAATGACCAGGCAATTAATGAGATCAGGAGGAAGTATGATGTAG 1829
Query 1738 AGAAGCAGGAGATTATTAATTCTGAAAAGGACAAGGTTGAAAGAATTATCAAGGAGCTGT 1797
||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 1830 AGAAGCATGAGATTATTAATTCTGAAAAGGACAAGGTTGAAAAAATTATCAAAGAGCTGT 1889
Query 1798 CCACTAAATATGATAAAGAACTCTCAGATTGCAAAGAAGAATCAAAGAGGCAACTGCTGA 1857
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1890 CCACTAAATATGATAAAGGACTCTCAGATTGCAAAGAAGAATCAAAGAGGCAACTGCTAA 1949
Query 1858 CTAGTCAAGAGGAACATTCTTCTCTGATTCTTAGTATTCGGGAGGAGCATGAGAGTAAGG 1917
| | |||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||
Sbjct 1950 CCATTCAAGAGGAACATTCTTCTCGGATTCTCAATATTCGGGAGGAGCACGAGAGTAAGG 2009
Query 1918 AGCTCAATCTCAAAGCCAAGTATGACCAGGAACTGAGACAAAATCAGATTCAGGCTGAAA 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2010 AGCTCAATCTCAAAGCCAAGTATGACCAGGAACTGAGACAAAATCAGATTCAGGCTGAAA 2069
Query 1978 ATGAACTAAAAGAG 1991
||||||| ||||||
Sbjct 2070 ATGAACTGAAAGAG 2083
Score = 448 bits (242), Expect = 2e-124
Identities = 273/288 (95%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 2365 CAAATCCAAAGCATCATAGCAAGG-AACCTCATCGTGAGTATGACGTTGAAACGAATAAT 2423
|||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||
Sbjct 2412 CAAATCCAAAGCATCATAGCAAGGTAA-CTCATCGTGAGTATGAGGTTGAAACGAATAAT 2470
Query 2424 GGGAGGATACCTAAACGGAGAAAAACAAGAAATACGACAATGTTTCAGGAGCTACAAAGA 2483
|||||||||||||||||||||||||||||| | || |||||||||||||||| |||||||
Sbjct 2471 GGGAGGATACCTAAACGGAGAAAAACAAGACAGACAACAATGTTTCAGGAGCCACAAAGA 2530
Query 2484 CGCAGTACTAGGTTGACACCCAAATTGATGACACCCAAAAGCATCGCCAAGGAAACAGCG 2543
|||||||||||||||||||||||||||||||| |||| || |||||| |||||||||||
Sbjct 2531 CGCAGTACTAGGTTGACACCCAAATTGATGACCCCCACAATCATCGCGAAGGAAACAGCA 2590
Query 2544 ATGGCCGGTCATCCTCGCTCTGCAAATATTGGAGACTTGTTTTCAGAAGGTTCCCTCAAC 2603
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ATGGCCGATCATCCTCACTCTGCAAATATTGGAGACTTGTTTTCAGAAGGTTCCCTCAAC 2650
Query 2604 CCATATGCTGATGATCCCTATGCATTTGATTGAAGTCTACCTCACAAA 2651
||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2651 CCATATGCTGATGATCCCTATGCATTTGATTGAAGTCTACCACACAAA 2698
Score = 339 bits (183), Expect = 1e-91
Identities = 197/204 (97%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 2074 AGAGGATAACGGCTTTGAAGAGTGAGCATGATGTTCAGTTGAAAGCATTCAAATGTCAGT 2133
|||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 2082 AGAGGATAACAGCTCTGAAGAGTGAGCATGATGCTCAGTTGAAAGCATTCAAGTGTCAGT 2141
Query 2134 ATGAAGATGATTGCAAGAAGCTGCAAGAAGAATTAGATCTTCAAAGGAAAAAAGAAGAGA 2193
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2142 ATGAAGATGACTGCAAGAAGCTGCAAGAAGAATTAGATCTTCAAAGGAAAAAAGAAGAGA 2201
Query 2194 GGCAAAGAGCTTTGGTGCAGTTACAGTGGAAGGTGATGAGTGACAATCCACCTGAAGAGC 2253
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2202 GGCAAAGAGCTTTGGTGCAGTTACAGTGGAAGGTGATGAGTGACAATCCACCTGAGGAGC 2261
Query 2254 AAGAAGTTAACTCAAACAAGGACT 2277
||||||| ||||||||||||||||
Sbjct 2262 AAGAAGTAAACTCAAACAAGGACT 2285
Score = 91.6 bits (49), Expect = 4e-17
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 2273 GGACTCTCCTTTTGTAAAGACAAAAGTAACATCTGTGTCAAATATATTGAAGAAAGCTAG 2332
||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
Sbjct 2353 GGAATCTCCTTTTGTAAAGGCAAAAGTAACATCTGTGTCAAATATATTGAAGGAAGCGAC 2412
Query 2333 AAAT 2336
||||
Sbjct 2413 AAAT 2416
> AT1G22260.1 | Symbols: ZYP1a, ZYP1 | Myosin heavy chain-related
protein | chr1:7859630-7865249 REVERSE LENGTH=2953
Length=2953
Score = 2933 bits (1588), Expect = 0.0
Identities = 1862/1994 (93%), Gaps = 20/1994 (1%)
Strand=Plus/Plus
Query 8 CTCCGATCTCGAGATGCAGAAATTAGGGTTTCCGGCGATGAAGAGCTTGGATCAA-CTCC 66
||||||||| ||||||||||| ||||||||||||||||||||||| |||||| || || |
Sbjct 95 CTCCGATCTAGAGATGCAGAAGTTAGGGTTTCCGGCGATGAAGAGTTTGGATAAACCT-C 153
Query 67 GATCGTTTTCTGGATCGGCGAAGACGTACTCCTTCTCCACTCGTCCGCCTCAGGATTCCG 126
||||||| |||||||||||||| | |||||||||||||| |||| ||||| ||||||||
Sbjct 154 GATCGTTGTCTGGATCGGCGAATATGTACTCCTTCTCCAATCGTAAGCCTCCGGATTCCG 213
Query 127 TCTCCTCCGGAAGTTTCTCGAATTTGAAACTCACTGCAGAGAAACTGGTGAAGGATCAGG 186
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 TTTCCTCCGGAAGTTTCTCGAATTTGAAACTCACTGCAGAGAAACTGGTGAAGGATCAGG 273
Query 187 CCGCTATGAGAACAGATCTAGAACTGGCGAATTGTAAGCTGAAAAAGTCACTGGAGCATG 246
| || |||||||||||||| ||| |||||||||||||||||||||||||| |||| ||||
Sbjct 274 CTGCGATGAGAACAGATCTCGAATTGGCGAATTGTAAGCTGAAAAAGTCAATGGAACATG 333
Query 247 TCTATGCCTTAGAGGATAAACTTCAAAACGCTTTTAATGAGAATGCTAAGCTCAGAGTTA 306
|||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct 334 TCTATGCCTTAGAGGAGAAACTGCAGAACGCTTTTAATGAGAATGCTAAGCTCAGAGTTA 393
Query 307 GGCAAAAGGAAGATGAGAAGCTTTGGAGAGGATTGGAATCTAAGTTCTCTTCGACAAAGA 366
|| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 394 GGAAAAAGGAAGATGAGAAGCTTTGGAGAGGATTGGAGTCTAAGTTCTCTTCAACAAAGA 453
Query 367 CTCTGTGTGATCAACTTACTGAGACTCTGCAGCATTTAGCTTCTCAAGTTCAGGATGCTG 426
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct 454 CTCTGTGTGATCAACTTACAGAGACTCTGCAGCATTTGGCTTCCCAAGTTCAGGATGCTG 513
Query 427 AGAAGGATAAAGttttttttGAGACCAAATTCAGTACTAGTTCAGAAGCAATAGACTCTT 486
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 AGAAGGATAAAGGTTTTTTTGAGACCAAATTCAGTACTAGTTCAGAAGCAATAGACTCTT 573
Query 487 TAAACCAGCAAATGCGAGACATGTCTTTAAGATTAGTTACTGCTAAAGAAGAAATCACAA 546
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 574 TAAACCAGCAAATGCGAGACATGTCTTTAAGATTAGATGCTGCTAAAGAAGAAATCACAA 633
Query 547 GCAGAGATAAGGAATTGGAGGAGCTCAAACTCGAGAAACAACAGAAGGAAATGTTCTATC 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 634 GCAGAGATAAGGAATTGGAGGAGCTCAAACTCGAGAAACAACAGAAGGAAATGTTCTATC 693
Query 607 AAACTGAACGGTGCGGAACTGCCAGTCTCATTGAGAAGAAAGATGCTGTGATAACAAAGT 666
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 694 AAACTGAACGGTGTGGAACTGCCAGTCTCATTGAGAAGAAAGATGCTGTGATAACAAAAT 753
Query 667 TAGAAACAACTGCAGCCGAAAGAAAACTCAACATTGAAAACTTGAACTCCCAACTGGAAA 726
| ||| || ||||||| ||||||||||||||||||||||||||||| |||||||| || |
Sbjct 754 TGGAAGCATCTGCAGCTGAAAGAAAACTCAACATTGAAAACTTGAATTCCCAACTAGAGA 813
Query 727 AGCTACATCTTGAGTTAACAACAAAAGAAGACGAGGTCAAAGACCTTGTTAGTATCCAGG 786
|| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 814 AGGTTCATCTTGAGTTAACAACAAAAGAAGACGAGGTCAAAGATCTTGTTAGTATCCAGG 873
Query 787 AGAAGTTGGAGAAAGAAAAGACGAGTGTTCAGTTGAGTGCAGATGAACTGTTT-GAAAAG 845
|||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct 874 AGAAGTTGGAGAAAGAAAAGACGAGTGTTCAGCTGAGTGCAGAT-AATTGTTTTGAAAAA 932
Query 846 CTTGTCAGCTCAGAGCAGGAGGTTAAGAAGCTCGATGAATTTGTCCACTACTTGGTAGCT 905
|| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 933 CTAGTCAGCTCAGAGCAGGAGGTTAAGAAGCTAGATGAATTAGTCCAATACTTGGTAGCT 992
Query 906 GAGTTGACTGAATTGGACAAAAAGAATCTGACCCTCAAGGGAAAGTTTGATAAACTAAGT 965
||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 993 GAGCTGACTGAATTGGACAAAAAGAATCTGACCTTCAAGGAAAAGTTTGATAAACTAAGT 1052
Query 966 GGCCTATATGATACCCACTTTATGTTG-TCGCGAAAAGACAGAGATCTTGCATCAGATCG 1024
|||||||||||||| ||| | |||||| | || |||||||||||||||||||| |||||
Sbjct 1053 GGCCTATATGATACTCACATAATGTTGCT-GCAAAAAGACAGAGATCTTGCATTGGATCG 1111
Query 1025 TGCTCAAAGATCGTTTGATCAA-CTCCAGGGCGAGTT-TTCTAGCA-TAACTGCC-CAAA 1080
|||||||||||| |||||| || |||||||||||||| || ||| | || ||||| ||||
Sbjct 1112 TGCTCAAAGATCATTTGAT-AATCTCCAGGGCGAGTTATT-TAG-AGTAGCTGCCACAAA 1168
Query 1081 AAGAAGCTCTGGAATCAACGAG-CAACGAACTAAGTGAAAAAATAGTTGTGCTCCAGAAT 1139
| |||||||||||||| | || ||| ||||||| |||||||||||||| ||||||||||
Sbjct 1169 A-GAAGCTCTGGAATCTGC-AGGCAATGAACTAAATGAAAAAATAGTTGAGCTCCAGAAT 1226
Query 1140 GATAAAGAGTCTTTAATATCTCAACTTTCTGGGGTACGCTGCTCTGCAAGCCAGACCATT 1199
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1227 GATAAAGAGTCTTTAATATCTCAACTTTCTGGGCTACGCTGCTCTACAAGCCAGACCATT 1286
Query 1200 GATAAATTGGAGTCTGAAGCAAAAGAACTGGTTTT-AAAGAATGCTGAAACAGAATCAGT 1258
|||||| |||||||||||||||||| ||| |||| ||| | |||||| |||||||||
Sbjct 1287 GATAAACTGGAGTCTGAAGCAAAAGGACTAGTTTCGAAACA-TGCTGATGCAGAATCAGC 1345
Query 1259 GATTTCGAAGCTGAAAGAGGAAATAGAAACTTTATTGGAAAGTGT-AAGGACATCAGCGG 1317
||||||| |||||||||| ||||| |||||||||||||||||||| ||| ||||||| ||
Sbjct 1346 GATTTCGCAGCTGAAAGAAGAAATGGAAACTTTATTGGAAAGTGTGAAG-ACATCAGAGG 1404
Query 1318 ATAAGAAGCAAGAATTGTCATTAAAGCTTTCATCATTAGAGATGGAAAGCAAAGAGAAGT 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 ATAAGAAGCAAGAATTGTCATTAAAGCTTTCATCATTAGAGATGGAAAGCAAAGAGAAGT 1464
Query 1378 ACGAGACACTGCAGGCAGATGCACATAGACATGTTGGGGAACTAGAGACTTTGCAAAAAG 1437
||||| |||||||||||||||||| ||||| |||| |||||||||||||||||| ||||
Sbjct 1465 GCGAGAAACTGCAGGCAGATGCACAGAGACAAGTTGAGGAACTAGAGACTTTGCAGAAAG 1524
Query 1438 AGAGTGAGAGCCATCAGCTGCAGGCGGATTTGTTGGCAAAAGAGGTGAACCAGCTCCAAA 1497
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1525 AGAGTGAGAGCCATCAGCTGCAGGCGGATTTATTGGCGAAAGAGGTGAACCAGCTCCAAA 1584
Query 1498 CCGTCATAGAGGAGAAAGGAAATCTTATCCTGCAGTGCAATGAAAACGAGAAGAATTTAA 1557
||||||||||||||||||| || ||||||| ||||||||||||||||||||| | ||||
Sbjct 1585 CCGTCATAGAGGAGAAAGGGCATGTTATCCTCCAGTGCAATGAAAACGAGAAGCAGTTAA 1644
Query 1558 ACCAACAAATCATTAAGGACAAGGAGCTACTGGCAACTGCTGAAACTAAGCTTGCAGAAG 1617
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 ACCAGCAAATCATTAAGGACAAGGAGCTACTGGCAACTGCTGAAACTAAGCTTGCAGAAG 1704
Query 1618 CAAAGAAGCAATATGACCTGATGCTAGAAAATAAACAGTTGGAATTGTCAAGGCACTTAA 1677
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1705 CAAAGAAGCAATATGACCTGATGCTAGAAAGTAAACAGTTGGAATTGTCAAGGCACTTAA 1764
Query 1678 AAGAATTATCACAGAGGAATGACCAGGCAATTAATGATATCAGGAGGAAGTATGATGTAG 1737
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1765 AAGAATTATCACAGAGGAACGACCAGGCAATTAATGAGATCAGGAGGAAGTATGATGTAG 1824
Query 1738 AGAAGCAGGAGATTATTAATTCTGAAAAGGACAAGGTTGAAAGAATTATCAAGGAGCTGT 1797
||||||| |||||||||||||||||||| ||||||||||||| ||||||||| || |||
Sbjct 1825 AGAAGCATGAGATTATTAATTCTGAAAAAGACAAGGTTGAAAAAATTATCAAAGATTTGT 1884
Query 1798 CCACTAAATATGATAAAGAACTCTCAGATTGCAAAGAAGAATCAAAGAGGCAACTGCTGA 1857
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1885 CCAATAAATTTGATAAAGAACTCTCAGATTGCAAAGAAGAATCAAAGAGGCAACTGCTGA 1944
Query 1858 CTAGTCAAGAGGAACATTCTTCTCTGATTCTTAGTATTCGGGAGGAGCATGAGAGTAAGG 1917
| | ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1945 CCATTCAAGAGGAACATTCTTCTCTGATTCTCAGTCTTCGGGAGGAGCATGAGAGTAAGG 2004
Query 1918 AGCTCAATCTCAAAGCCAAGTATGACCAGGAACTGAGACAAAATCAGATTCAGGCTGAAA 1977
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2005 AGCTCAATCTCAAAGCCAAGTATGACCAGGAACTGAGACAAAGTCAGATTCAGGCTGAAA 2064
Query 1978 ATGAACTAAAAGAG 1991
| ||||| ||||||
Sbjct 2065 ACGAACTGAAAGAG 2078
Score = 466 bits (252), Expect = 5e-130
Identities = 344/386 (89%), Gaps = 15/386 (4%)
Strand=Plus/Plus
Query 2272 AGGACTCTCCTTTTGTAAAGACAAAAGTAACATCTGTGTCAAATATATTGAAGAAAGCT- 2330
|||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||||
Sbjct 2362 AGGACTCTCCTTTTGTAAAGGCAAAAGAAACACCTGTGTCAAAAATATTGAAGAAAGCTC 2421
Query 2331 AGAAATGTAAACACAGGAAGCGTAATGAGCATTCCAAATCCAAAGCATCATAGCAAGG-A 2389
| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2422 A-AAATGTAAACGCAGGAAGCGTACTGAGCATTCCAAATCCAAAGCATCATAGCAAGGTG 2480
Query 2390 ACCTCATCGTGAGTATGACGTTGAAACGAATAATGGGAGGAT-ACCTAAACGGAGAAAAA 2448
| | |||||||||||||| ||||||||||||||||||||| | ||| ||||| |||||||
Sbjct 2481 A-CACATCGTGAGTATGAAGTTGAAACGAATAATGGGAGGGTAACC-AAACGAAGAAAAA 2538
Query 2449 CAAGAAATACGACAATGTTTCAGGAGCTACAAAGACGCAGTACTA-GGTTGACACCCAAA 2507
|||||||||| || |||||| |||||| |||||||||||| |||| || | ||||| |||
Sbjct 2539 CAAGAAATACAACCATGTTTGAGGAGCCACAAAGACGCAGGACTAGGGCT-ACACCTAAA 2597
Query 2508 TTGATGACACCCAAAAGCATCGCCAAGGAAACAGCG-ATGGCCG-GTCATCCTCGCTCTG 2565
| |||| ||| |||| |||||||||| |||| | || | || ||||| |||||||||
Sbjct 2598 -T--TGACCCCCCAAAGTATCGCCAAGGGCACAG-GAAT-GACGAGTCATGCTCGCTCTG 2652
Query 2566 CAAATATTGGAGACTTGTTTTCAGAAGGTTCCCTCAACCCATATGCTGATGATCCCTATG 2625
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2653 CAAATATTGGAGACTTGTTTTCAGAAGGTTCTCTCAACCCATATGCTGATGATCCCTATG 2712
Query 2626 CATTTGATTGAAGTCTACCTCACAAA 2651
||||||||||||||||||||| ||||
Sbjct 2713 CATTTGATTGAAGTCTACCTCGCAAA 2738
Score = 322 bits (174), Expect = 1e-86
Identities = 194/204 (95%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 2074 AGAGGATAACGGCTTTGAAGAGTGAGCATGATGTTCAGTTGAAAGCATTCAAATGTCAGT 2133
|||||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 2077 AGAGGATAACAGCTCTGAAGAGTGAGCATGATGCTCAGTTGAAAGCATTCAAGTGTCAGT 2136
Query 2134 ATGAAGATGATTGCAAGAAGCTGCAAGAAGAATTAGATCTTCAAAGGAAAAAAGAAGAGA 2193
|||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 2137 ATGAAGATGACTGCAAGAAGCTTCAAGAAGAATTAGATCTTCAAAGGAAAAAGGAAGAGA 2196
Query 2194 GGCAAAGAGCTTTGGTGCAGTTACAGTGGAAGGTGATGAGTGACAATCCACCTGAAGAGC 2253
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2197 GGCAACGAGCTTTGGTGCAGTTACAGTGGAAGGTGATGAGTGACAATCCACCTGAAGAGC 2256
Query 2254 AAGAAGTTAACTCAAACAAGGACT 2277
||||||| |||||||||||| |||
Sbjct 2257 AAGAAGTAAACTCAAACAAGAACT 2280
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131939060090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5