BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921260 Length=298 Score E Sequences producing significant alignments: (Bits) Value AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) fa... 206 1e-52 > AT1G09080.1 | Symbols: BIP3 | Heat shock protein 70 (Hsp 70) family protein | chr1:2929217-2931841 REVERSE LENGTH=2116 Length=2116 Score = 206 bits (111), Expect = 1e-52 Identities = 136/148 (92%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 1 CTCGAATCCCAAAAGTTCAGTAGATGTTAAAGGATTTCTTCGATGGCAAGGAACCCAACA 60 |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct 1194 CTCGAATCCCAAAAGTTCAGCAGATGTTAAAGGATTTCTTCGACGGCAAGGAACCCAGCA 1253 Query 61 AAGGAACTAACCCTGATGAGGTTTTGGCCTAT-ACAACCGCCGTCCAAGGTGGAGTATTA 119 |||| |||||||||||||||| | |||||||| | |||| |||||||||||||||||| Sbjct 1254 AAGGGACTAACCCTGATGAGGCTGTGGCCTATGGC-GCCGCGGTCCAAGGTGGAGTATTA 1312 Query 120 AGTGGTGAAGGTGGAGAAGAAACGCAAA 147 ||||||||||||||||||||||| |||| Sbjct 1313 AGTGGTGAAGGTGGAGAAGAAACACAAA 1340 Score = 169 bits (91), Expect = 2e-41 Identities = 117/129 (91%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 173 GATCCCAACGAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTTAC 232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1429 GATCCCAACGAAGAAGTCTCAGGTGTTCACTACTTACCAAGATCAGCAAACTACTGTGAC 1488 Query 233 TATCAACGTCTATGAAG---AGATAAGCATGACGAAAGATAACCCCTAGCTCGGAAATTT 289 |||||||||||| |||| ||| |||||||||||||||||||| | |||| ||||| || Sbjct 1489 TATCAACGTCTACGAAGGCGAGAGAAGCATGACGAAAGATAACCGCGAGCTTGGAAAATT 1548 Query 290 CCAGCTCAC 298 | | ||||| Sbjct 1549 CGATCTCAC 1557 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13773363226 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5