BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921331 Length=243 Score E Sequences producing significant alignments: (Bits) Value AT3G52320.1 | Symbols: | F-box and associated interaction doma... 156 1e-37 > AT3G52320.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:19403020-19404192 REVERSE LENGTH=1173 Length=1173 Score = 156 bits (84), Expect = 1e-37 Identities = 132/155 (85%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 67 ATCAGATTGCCGGCGAAATCTCTGATGAGATTCAAGTGCGTCTCAAAGCTCTGGCTCTCA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 109 ATCAGATTGCCGGCGAAATCTCTGATGAGATTCAAGTGCGTCTCAAAGCTCTGGCTTTCC 168 Query 127 CTCATCTTATCTCGTTACTTGACCAACCGATTCCTTAAACCCTCACCACGAAGTCGTTAT 186 || ||| ||||| ||||| |||||||| ||| ||||||||||| ||| |||| ||| | Sbjct 169 CTTATCACCTCTCGATACTTCACCAACCGTTTCTTTAAACCCTCATCACCAAGTTGTT-T 227 Query 187 CT-CGCCTATTTTGTGGATAGCGAGAAA-CATAGC 219 | ||| ||| ||||||| || || ||| || ||| Sbjct 228 GTTCGCGTATCTTGTGGACAGGGA-AAATCAGAGC 261 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11008637031 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5