BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921335 Length=1255 Score E Sequences producing significant alignments: (Bits) Value AT1G23070.1 | Symbols: | Protein of unknown function (DUF300) ... 1991 0.0 > AT1G23070.1 | Symbols: | Protein of unknown function (DUF300) | chr1:8173823-8175819 REVERSE LENGTH=1461 Length=1461 Score = 1991 bits (1078), Expect = 0.0 Identities = 1196/1255 (95%), Gaps = 0/1255 (0%) Strand=Plus/Plus Query 1 TATGTATAAAATTTTGGAAGAATGGGAGTAACGGAGACAAGTACGTACAGAGATCTACAT 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41 TATGTCTAAAATTTTGGAAGAATGGGAGTAACGGAGACAAGTACGTACAGAGATCTACAT 100 Query 61 TTACCGTCTTTGATCATCGGAGGATCATTCGCCGCCGTTGCCATTTGTCTCTCCCTTTTC 120 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | Sbjct 101 TTACCGTCTTTGATCATCGGAGGATCCTTCGCCACCGTTGCCATTTGTCTCTCCCTTTAC 160 Query 121 TCTATCCTCCAACATCTCCGTTTCTACACCAATCCTGCTGAACAAAAATGGATTGTTTCT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 161 TCTATCCTCCAACATCTCCGTTTCTACACCAATCCTGCTGAACAAAAATGGATTGTTTCT 220 Query 181 GTTTTATTTATGGTGCCAGTTTATGCAACCGAATCGATCATTTCCTTGTCCAATTCGAAA 240 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 221 GTTTTGTTTATGGTGCCAGTTTATGCAACTGAATCGATCATTTCCTTGTCCAATTCGAAA 280 Query 241 TTCTCGCTACCCTGTGACATTTTGAGAAACTGCTATGAGGCTTTTGCTTTGTATTCCTTT 300 |||||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 281 TTCTCGCTGCCTTGTGACATTTTGAGAAACTGCTATGAAGCTTTTGCTTTGTATTCGTTT 340 Query 301 GGAAGCTACTTGGTGGCGTGTCTAGGTGGTGAAAGAAGAGTTGTTGAATACCTCGAACAT 360 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| || Sbjct 341 GGAAGCTACTTGGTGGCATGTCTAGGTGGTGAAAGAAGAGTTGTTGAATACCTTGAAAAT 400 Query 361 GAATCAAAGAAACCATTGTTagaagaaggagcaaatgagagcaaaaagaagaagaagaag 420 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 401 GAATCAAAGAAACCATTGTTAGAAGAAGGAGCAAATGAGAGTAAAAAGAAGAAGAAGAAG 460 Query 421 agTTCATTTTGGAAATTCTTGTGTGATCCATATGTCTTGGGACGAGAGCTCTTTGTGATC 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 AATTCATTTTGGAAATTCTTGTGTGATCCATATGTCTTGGGACGAGAGCTCTTTGTGATA 520 Query 481 GAGAAGTTTGGTCTCGTCCAGTATATGATCCTTAAAACCTTTTGTGCCTTCTTGACATTT 540 || |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct 521 GAAAAGTTTGGTCTCGTTCAATATATGATCCTCAAAACCTTTTGTGCCTTCTTGACATTT 580 Query 541 CTGTTGGAGCTTCTTGGTGTCTATGGAGATGGTGAATTCAAATGGTATTACGGATACCCA 600 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 581 TTGTTGGAGCTTCTTGGTGTCTATGGTGATGGTGAATTCAAATGGTATTACGGATATCCA 640 Query 601 TACATAGTGGTGGTGCTAAACTTCAGCCAGATGTGGGCTCTGTTTTGCTTGGTTCAGTTC 660 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 641 TACATAGTGGTGGTGCTAAACTTCAGCCAAATGTGGGCTCTGTTTTGCTTGGTTCAGTTC 700 Query 661 TATAACGTGACTCATGAACGCCTTAAAGAAATAAAGCCGTTGGCTAAGTTCATTAGCTTT 720 ||||| || ||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 701 TATAATGTCACTCATGAACGGCTTAAAGAAATAAAACCGTTGGCTAAGTTCATTAGCTTT 760 Query 721 AAGGCTATCGTGTTTGCCACTTGGTGGCAAGGCTTCGGGATCGCGTTGCTTTGTTATTAC 780 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 761 AAGGCTATCGTGTTTGCGACTTGGTGGCAAGGCTTCGGTATCGCGTTGCTTTGTTATTAC 820 Query 781 GGTATACTTCCAAAAGAAGGAAGATTCCAGAACGGGTTGCAAGATTTTCTCATTTGCATT 840 |||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||| Sbjct 821 GGTATACTTCCAAAAGAAGGTCGATTCCAAAACGGGCTGCAAGATTTCCTCATTTGCATT 880 Query 841 GAGATGGCGATTGCAGCGGTGGCTCATCTTTTTGTTTTTCCAGCTGAACCTTACCACTAT 900 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 881 GAGATGGCGATTGCAGCGGTGGCTCATCTCTTTGTTTTTCCAGCTGAACCTTACCACTAC 940 Query 901 ATTCCGATATCAGTGTGTGGTAAAATCACAGCCGAAACAAGCAAGACGGAAGTGAAACTA 960 |||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 941 ATTCCGGTATCAGAGTGCGGTAAAATCACAGCCGAAACGAGCAAGACGGAAGTGAAACTA 1000 Query 961 GAAGAAGGTGGTCTTGTTGAGACAACGGAGACTCAGGTTGAAGCATCTGGCACAAGCATT 1020 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1001 GAAGAAGGTGGTCTTGTTGAGACCACGGAGACTCAGGTTGAAGCATCTGGCACAAGCATT 1060 Query 1021 AAGGAGAGTGTACAAGACATAGTTATTGATGGTGGCCAACACGTCGTGAAAGATGTGGTT 1080 |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| ||| Sbjct 1061 AAGGAGAGTGTACAGGACATAGTGATTGACGGTGGCCAACATGTCGTGAAAGATGTAGTT 1120 Query 1081 CTTACTATAAACCAAGCAATGGGACCGGTGGAGAAGGGTGTGACGAAGATCCAGGATACG 1140 ||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct 1121 CTTACAATAAACCAAGCAATAGGACCGGTAGAGAAGGGTGTAACGAAGATCCAGGATACG 1180 Query 1141 ATTCATCAAAAGCTTTTGGATTCGGATGGTAAAGAAGAAACAGAAGTGACTGAAGAAGTG 1200 ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 1181 ATTCATCAAAAACTTTTGGATTCGGACGGTAAAGAAGAAACAGAAGTGACCGAAGAAGTG 1240 Query 1201 ACCGTTGAGACTTCGGTGCCGCCAAAAGAGTGATTTTTGAGATTTGCTCTTTGTT 1255 |||||||||||||||||||| ||||||||||||| |||| |||||| ||||||| Sbjct 1241 ACCGTTGAGACTTCGGTGCCCCCAAAAGAGTGATCGTTGAAATTTGCCCTTTGTT 1295 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61696469805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5