BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921411 Length=922 Score E Sequences producing significant alignments: (Bits) Value AT1G23570.2 | Symbols: | Domain of unknown function (DUF220) |... 817 0.0 AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | c... 436 1e-121 AT1G23590.1 | Symbols: | Domain of unknown function DUF220 | c... 429 2e-119 AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | c... 283 2e-75 > AT1G23570.2 | Symbols: | Domain of unknown function (DUF220) | chr1:8354806-8356364 REVERSE LENGTH=1067 Length=1067 Score = 817 bits (442), Expect = 0.0 Identities = 515/550 (94%), Gaps = 6/550 (1%) Strand=Plus/Plus Query 377 GGAAAACAAATCGAGAAAGGTTCTGATGGAGGATGGACCAAGGCAGATCGCGAAGGTGAA 436 ||||| |||||| ||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct 237 GGAAAGCAAATCAAGAAAGGTTTTAATGGAGGATGGACCGAGGCAGATCGCGAAGGTGAA 296 Query 437 GAAAACCGTGGACTGGAAATTCCTTGGGTCGTCTTTTGCTGTCCCCATAAGTGTAATTGT 496 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 297 GAAAACCGTGGACTGGAAATTCCTTGGGTCGTCTTTTGCTGTCCCCATAAGTCTAATTGT 356 Query 497 CGATGAAAACAGAAAAGATCTTACTGCAAAATATAAGAAAAAGAAAATGATCTTAATGAA 556 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 357 CGATGAAAACAGAAAAGATCTTACAGCAAAATATAAGAAAAAGAAAATGATCTTGATGAA 416 Query 557 AGTGTTCGAGGGTAGCTATAAAGTGGAGCCAGTGTATGTAGATTCAGAACGCTTGTGCAA 616 ||| ||||| |||||||||| |||||||||| | |||||||||||||||||||||||||| Sbjct 417 AGTTTTCGAAGGTAGCTATAGAGTGGAGCCACTATATGTAGATTCAGAACGCTTGTGCAA 476 Query 617 GAACATGGAGCCGAAGAGTCCGGAAGACTACAAAAGATGTAGCGGCGGACAAGGAAGGAT 676 |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| Sbjct 477 TAACATGGAGCCGAAGAGTCCGGCAGAATACAAAAGATGTAGCGGTGGACAAGGAAGGAT 536 Query 677 TGCATCAAAGGTGACAATGAACCAATACTTTAAGCCATATCCTCCTTTTAATCTGCCGCC 736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 TGCATCAAAGGTGACAATGAACCAATACTTTAAGCCATATCCTCCTTTTAATCTGCCGCC 596 Query 737 ACTATCTTGGTACATTCGTGAGGTCACCATCAAGAACACCAAAACTGCGCTCAAAACACT 796 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 597 ACTATCTTGGTACATTCGAAAGGTCACCATCAAGAACACCAAAACTGCGCTGAAAACACT 656 Query 797 TCAAACTTGGGGTATAACCCTTCGAAA-CCGAGGTGAAGTGACTTCAACAGACAAAGATG 855 ||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||| ||| Sbjct 657 TCAAACTTGGGGTATAAACCTTCGAAATCC-AGGTGCAGTGACTTCAACAGACAAATATG 715 Query 856 GAAACGTAACAAAATCACGAAGaaaaaaaTTAACCAATAA-AAAC-T-GAAAACACTAGG 912 |||||||||||| ||||| |||||||||| || || || |||| | |||||||||||| Sbjct 716 GAAACGTAACAATATCACCAAGAAAAAAAAGAAA-AACAACAAACATTGAAAACACTAGG 774 Query 913 CTAAATGAAT 922 |||||||||| Sbjct 775 CTAAATGAAT 784 Score = 342 bits (185), Expect = 3e-93 Identities = 221/238 (93%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 21 ATGGTATTTACAGGATTTGGTGGCTGGGTCAATCAGAACAATGAACAGCCTCGTAAGGCC 80 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||| |||||| Sbjct 1 ATGGTATTTACTGGATTTGGTGGCTGGGTCAGTCAAAACAATAAACAGCCTCGAAAGGCC 60 Query 81 AAGCCCAAAATAACTGAAAATGTTGAATCTAAGTCAGAGTCAGAAATGG---ATACTAAT 137 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 61 AAGCCCAAAAAAACTGAAAATGTTGAATCTAAGTCAGAGTCAGAAATGGTGGATAATAAT 120 Query 138 GATGACTATGATAAGATGAAGAAATATTATGACGAAGAAGAGATGAAGAAACAAGATCAA 197 || || ||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 121 AATAACCATGATAAGATGAAGAAATATTATGACGAAGATGAGAGGAAGAAACAAGATCAA 180 Query 198 CTTTGGATAGATGCAGAGAAGAAGCATCCATGGAATGATGCCCCTCCAAAGGTGAAGG 255 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 181 GTTTGGATAGATGCAGAGAAGATGCATCCATGGAATGATGCCCCTCCAAAGGTGAAGG 238 > AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | chr1:8361004-8362485 REVERSE LENGTH=1134 Length=1134 Score = 436 bits (236), Expect = 1e-121 Identities = 630/810 (78%), Gaps = 68/810 (8%) Strand=Plus/Plus Query 20 AATGGTATTTACAGGATTTGGTGGCTGGGTCAATCAGAACAATGAACAGCCTCGTAAGGC 79 ||| || ||| | ||||||||||||||| |||||||||||||| ||||||| | |||| Sbjct 131 AAT-GTGTTTCCTGGATTTGGTGGCTGGATCAATCAGAACAATCAACAGCCCCCAAAGGG 189 Query 80 CAAGCCCAAAATAACTGAAAATGTTGAATCTAAGTCAGAGT-CAGAAATGGATACTAATG 138 | || |||| | | |||| || ||| ||||||| || || | | || |||||||||||| Sbjct 190 CGAGTCCAAGAGATCTGAGAACGTTAAATCTAACTC-GAATACGGATATGGATACTAATA 248 Query 139 ATGACTATGATAAGATGAAGAAATATTATGACGAAGAAGAGATGAAGAAAC-AAGATCAA 197 || || | ||||| | || | || ||||| ||| ||| || || Sbjct 249 AT-AC--CG--AAGAT---G-------AT---G-AG--GAGATTAAGCAACTAA-AT--- 283 Query 198 CTTTGGA-TAGATGCAGAGAAGAAGCATCCATGGAATGATGCCCCTCCAAAGGTGAAGGT 256 ||||||| | |||||||||||||||||||||||| ||||| |||||||||| |||||||| Sbjct 284 CTTTGGAGT-GATGCAGAGAAGAAGCATCCATGGTATGATCCCCCTCCAAAAGTGAAGGT 342 Query 257 GACAACAAAAAATGGTCTTTGCCATATGAACATAGAATTGACACTGGGATTTCCTCCAGA 316 ||||| ||||| |||||||||||||||||||||||||||||| | ||| | ||||| || Sbjct 343 GACAATGAAAAAGGGTCTTTGCCATATGAACATAGAATTGACATTAGGAGTGCCTCCTGA 402 Query 317 TAAAGTCTT-CGGATTTTTTACTGA-TCCATCTAACGGACCATT-TTT-TC-T---C--- 365 | || | | || | |||| | | | |||| | ||| |||||| ||| | | | Sbjct 403 TGGAG-CATACGAACTTTTCA-TCAATCCAACCAACATACCATTCTTTGTTATAGACAAG 460 Query 366 TCCC--C-AC--CT-CTGGAAAACAAATCGAGAAAGGTTCTGATGGAGGATGGACCAAGG 419 || | || || |||| ||||||||| |||||| || ||| | | |||||||| ||| Sbjct 461 TCAGGGCGACAACTTCTGGCAAACAAATCAAGAAAGATTTTGAAGAAAGATGGACCTAGG 520 Query 420 CAGATCGCGAAGGTGAAGAAAACCGTGG-ACTGGAAATTCCTTGGGT-CGTCTTT-TGCT 476 |||| || ||||||||||||| | |||| | ||| | |||||| ||| | ||| | || Sbjct 521 CAGACCGTGAAGGTGAAGAAAGCTGTGGCA-TGGGACTTCCTTTGGTTC-TCTGGAT-CT 577 Query 477 GTCCCCAT-AAGTGTAATTGTCGATGAAAACAGAAAAGATCTT-ACTGCAAAATATAAGA 534 ||||||| || | |||||||| | ||||||| |||||| ||| | | ||||||||||| Sbjct 578 CTCCCCATTAATT-TAATTGTCAACGAAAACAAAAAAGACCTTGAA-GTAAAATATAAGA 635 Query 535 AA-AAGAAAATGATCTTAATGAAAGTGTTCGAGGGTAGCTATAAAGTGGAGCCAGTGTAT 593 || || |||||||| || |||||||||||||| ||||||| ||| | || ||| | ||| Sbjct 636 AAGAA-AAAATGATGTTCATGAAAGTGTTCGAAGGTAGCTGGAAAATAGAACCACTATAT 694 Query 594 GTAGATTCAGAACGCTTGTGCAAGAACATGGAGCCGAAGAGTCCG-GAAGACTACAAAAG 652 |||||| |||| ||||| |||||||||||| | || ||||||| | ||||| ||||||| Sbjct 695 GTAGATGCAGATCGCTTATGCAAGAACATGAAACCTAAGAGTC-GAGAAGAATACAAAAA 753 Query 653 ATGTAGCGGCGGACAAGGAAGGATTGCATCAAAGGTGACAATGAACCAATACTTTAAGCC 712 |||||| ||||||||||||| |||||| |||| ||||| ||| ||||||| ||| |||| Sbjct 754 ATGTAGTGGCGGACAAGGAAAAATTGCACCAAAAGTGACTATGGACCAATATTTTCAGCC 813 Query 713 ATATCCTCCTTTTAA-TCTGCCGCCACTATCTTGGTACATTCGTGAGGTCACCATCAAGA 771 |||||||| |||||| ||||||||| | |||||||| |||||| | |||||||||||| Sbjct 814 ATATCCTC-TTTTAAATCTGCCGCCGTTTTCTTGGTATATTCGTAACATCACCATCAAGA 872 Query 772 ACACCAAAACTGC-GCTCAAAACACTTCAA 800 |||||||||| | |||||||| |||||| Sbjct 873 CCACCAAAACT-CTGCTCAAAATGCTTCAA 901 > AT1G23590.1 | Symbols: | Domain of unknown function DUF220 | chr1:8359125-8360645 REVERSE LENGTH=1093 Length=1093 Score = 429 bits (232), Expect = 2e-119 Identities = 505/631 (80%), Gaps = 41/631 (6%) Strand=Plus/Plus Query 196 AACTTTGGATAGATGCAGAGAAGAAGCATCCATGGAATGATGCCCCTCC-AAAGGTGAAG 254 ||||||||| ||||||||||||||| |||||||| ||||||||||||| ||| || ||| Sbjct 234 AACTTTGGAGAGATGCAGAGAAGAAATATCCATGGTATGATGCCCCTCCTAAA-GTCAAG 292 Query 255 GTGACAACAAAAAATGGTCTTTGCCATATGAACATAGAATTGACACTGGGATTTCCTCCA 314 |||||||||||||| ||||||||||||||| |||||||||||||| | ||||| |||||| Sbjct 293 GTGACAACAAAAAAGGGTCTTTGCCATATGTACATAGAATTGACATTTGGATTGCCTCCA 352 Query 315 -GATAAAGTCTTCGGA-TTTTTTACTGATCCA-TCTAACGGACCA-T--T--TTTTC--- 363 ||| ||||||| || |||| ||| ||||| | ||| |||| | | | | Sbjct 353 CGAT-CAGTCTTC-GAGCTTTTCACTAATCCAGAC-AACTTACCACTCGTCAGTGACAAG 409 Query 364 TC-T--C-CCCACCTCTGGAAAACAAATCGAGAAAGGTTCTGATGGA-GGATGGACCAAG 418 || | | || || ||||| ||||||| || |||||| ||| || |||||||||||| Sbjct 410 TCTTGGCGCCAACTTCTGGTAAACAAAAAAAGGAAGGTTTTGA-AGAGGGATGGACCAAG 468 Query 419 GCAGATCGCGAAGGTGAAGA-AAA-CCGTGGACTGGAAATTCCTTG-GGTCGTCTTTTGC 475 |||||| | | |||| ||| ||| |||| |||| | |||| || ||| |||| | Sbjct 469 GCAGATAGTGGAGGT--AGATAAAGTTGTGGCCTGGGATTTCC-TGTGGTGGTCTGGAGG 525 Query 476 TGTCCCCATAAGTGTAATTGTC-GATGAAAACAGA-AAAGATCTTACTGCAAAATATAAG 533 | | || |||| | ||| || | | |||||| || |||||||||| | |||||||||| Sbjct 526 TATGCCGATAAATATAAATG-CGGTTGAAAA-TGAGAAAGATCTTAGGGGAAAATATAAG 583 Query 534 AAAAAGAAAATGATCTTAATGAAAGTGTTCGAGGGTAGCTATAAAGTGGAGCCAGTGTAT 593 ||| ||||||||| || |||||||||||||||||||||||||||||||||||| | ||| Sbjct 584 AAACAGAAAATGAAGTTCATGAAAGTGTTCGAGGGTAGCTATAAAGTGGAGCCAATTTAT 643 Query 594 GTAGATT-CAGAACGCTTGTGCAAGAACATGGAGCCGAAGAGTCCGGAAGACTACAAAAG 652 ||||||| | || ||||||||||| | | |||||| |||||||| ||||| ||||||| Sbjct 644 GTAGATTTC-GAGCGCTTGTGCAATCAGAAGGAGCCAAAGAGTCCAGAAGAATACAAAAA 702 Query 653 ATGTAGCGGCGGACAAGGAAGGATTGCATCAAAGGTGACAATGAACCAA-TACTTTAAGC 711 ||||||||| || ||||||| |||||||||||| ||||||||| ||||| || ||| ||| Sbjct 703 ATGTAGCGGTGGGCAAGGAAAGATTGCATCAAAAGTGACAATGGACCAAATATTTTCAGC 762 Query 712 CATATCCTCCTTTTAATCTGCCGCCACTATCTTGGTACATTCGTGAGGTC-ACCATCAAG 770 |||||||| ||||||| ||||||| | ||||||||||||||| ||| | ||||||||| Sbjct 763 CATATCCTATTTTTAATTTGCCGCCG-T-TCTTGGTACATTCGT-AGGACCACCATCAAG 819 Query 771 AACACCAAAACTGC-GCTCAAAACACTTCAA 800 | ||||| ||| | |||||||| |||||| Sbjct 820 ACCACCACGACT-CTGCTCAAAATGCTTCAA 849 > AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | chr1:8371609-8372845 REVERSE LENGTH=868 Length=868 Score = 283 bits (153), Expect = 2e-75 Identities = 499/657 (76%), Gaps = 59/657 (9%) Strand=Plus/Plus Query 159 AAATATTATGACGAAGAAG-AGATGAAGAAACAA-GATCAACTTTGGATAGATGCAGA-G 215 |||||||| ||| ||| | || ||| || | || || || |||||| || |||||| | Sbjct 182 AAATATTACGACTTAGATGAAG-TGAGGAGAGAAGGA-GAAATTTGGAGAGCTGCAGAGG 239 Query 216 AAGAAGCATCCATGGAATGATGCCCCTCCAAAGGTGAAGGTGACAACAAAAAATGGTCTT 275 || |||||||||||| ||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 240 AA-AAGCATCCATGGTATGATGCTCCTGCTAAGGTGAAGGTGACAACAAAAAATGGTCTT 298 Query 276 TGCCATATGAACATAGAATTGACACTGGGATTTCCTCCAGATAA-AGTCTTCG-GATTTT 333 |||||||||||||||||||| | ||||||||| ||||| || | ||||| || ||| || Sbjct 299 TGCCATATGAACATAGAATTTAAACTGGGATTACCTCCTGA-AGGAGTCTACGAGATGTT 357 Query 334 TTACTGATCCAT-CTAACGGA-CCATTTTTTCT-------CT---CC---C-C-ACC-TC 375 ||| ||||| | ||| | ||| | || | | || | | | | || Sbjct 358 C-ACTAATCCAAAC-AACT-ATCCAGTCTT-CAAAAAGGACAAGGCCGGGCGCCAACGTC 413 Query 376 TGGAAAACAAATCGAGAAAGGTTCTGATGGAGGATGGACCAAGGCAGATCGCGAAGGTGA 435 ||||||||||||| ||||| ||| ||| | | ||||||| ||||||| | || || || Sbjct 414 TGGAAAACAAATCAAGAAAAGTTTTGAAGAAAAATGGACCGAGGCAGACCACGGAGATGG 473 Query 436 AGAAAACCGTGG-ACTGGAAATTCCTTGGGTCGTCTTTTG--CTGTCCCCATA-AGTGTA 491 | |||| | | ||||||| |||||| || | | | | |||| ||| | | || Sbjct 474 A-AAAAGATTTGTACTGGAACTTCCTTT--TCATATCCAGAGCAATCCCGATACA-TCTA 529 Query 492 ATTGTCGATGAAAA-CAGAAAAGATCTTACTGCAAAATATAAGAAAAAGAAAATGATCTT 550 || |||||||||| || || | |||| || |||||||||| || |||||| ||||| || Sbjct 530 GTTATCGATGAAAATCATAAGA-ATCTCACAGCAAAATATAGGACAAAGAATATGATGTT 588 Query 551 AATGAAAGTGTTCGAGGGTAGCTATAAAGTGGAGCCAGTGTATGTAGATTCAG-AACGCT 609 |||||||||| |||||||||| ||||||| ||||| | ||||||| ||| |||||| Sbjct 589 TTTGAAAGTGTTGGAGGGTAGCTGGAAAGTGGTGCCAGACTTTGTAGAT-CAGGAACGCT 647 Query 610 TGTGCAAGAACATGGA-GCCGAAGAGTCCG-GAAGACTACAAAAGATGTAGCGGCGGACA 667 |||||||| || || |||||| |||| | ||||| |||||||||||||| || ||||| Sbjct 648 TGTGCAAGT-CAAGGTTGCCGAAAAGTC-GAGAAGAATACAAAAGATGTAGTGGTGGACA 705 Query 668 AGGAA-GGATTGCATCAAAGGTGACAATGAACCA-ATACTTTAAGCCATATCCTCCTT-T 724 ||||| || ||| || |||||||| ||| | || || ||||||||| | ||||| || | Sbjct 706 AGGAAAGG-TTGGGTCCAAGGTGACCATGGAGCAGAT-CTTTAAGCCTTCTCCTC-TTCT 762 Query 725 TAATCTGCCGCCACTATCTTGG-TACATTCGTGAGG-TCACCATCAAGAAC-ACCAA 778 ||||||||| || | |||||| || || |||| || | |||||||| ||| ||||| Sbjct 763 TAATCTGCCACCGGTTTCTTGGATA-ATCCGTG-GGATTACCATCAA-AACCACCAA 816 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45060029859 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5