BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921494
Length=1283
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superf... 322 5e-87
AT2G03460.1 | Symbols: | Galactose oxidase/kelch repeat superf... 257 2e-67
AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superf... 191 2e-47
AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superf... 167 3e-40
AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing... 148 1e-34
AT3G09750.1 | Symbols: | Galactose oxidase/kelch repeat superf... 134 3e-30
AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superf... 97.1 4e-19
> AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:20830743-20831849 FORWARD LENGTH=1107
Length=1107
Score = 322 bits (174), Expect = 5e-87
Identities = 821/1117 (74%), Gaps = 109/1117 (10%)
Strand=Plus/Plus
Query 161 GTCACTTCCCTATGATTTGCTATTCAAC-TGCCTAGCCCGGGTCTCAAGGTTGTACTATC 219
|||||||||| ||||||||||||| | | | | | || || ||||||| ||||||||||
Sbjct 6 GTCACTTCCCGATGATTTGCTATTGAGCAT-CTTCGCACGCATCTCAAGATTGTACTATC 64
Query 220 CCACTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCCTTGCTTCACCCGAGCTTTACA 279
| |||||||| || |||||||||||||| |||||||| || |||||||| || |||||||
Sbjct 65 CGACTCTCTCTCTTGTCTCCAAGAGCTTCCGATCTCTACTAGCTTCACCGGACCTTTACA 124
Query 280 GGGCCCGCTCACTCTTGGGCCGCACCGAGAGTTGTCTCTATGTGTGCATCCA--GGGCTT 337
||||| |||||||| |||| ||| |||||||||||||| |||||| | || | ||
Sbjct 125 AAGCCCGATCACTCTTAGGCCACACTGAGAGTTGTCTCTACGTGTGCTTTCATTTTGATT 184
Query 338 -T---CCTGATTGTCGCTGGTTCACCCTCTGTCGGAAACCTCATGG-GCTGCTAACCAGT 392
| ||| | | |||||||| ||||||||||||||| | || | ||||||| |
Sbjct 185 CTGGCCCTAACACACATTGGTTCACTCTCTGTCGGAAACCTGACGGAAC-CCTAACCAAT 243
Query 393 GGTTATACCTGT-ACTAG-GGCAACGTCAAGTGGGTATGTTTTGGCTGCAGTCCCAAGTC 450
| | ||| || | || | || ||||| |||||||||||||||| | || |||| ||
Sbjct 244 -G--ACACCAGTAAGAAGAAG-AA-GTCAAATGGGTATGTTTTGGCTACTGTGCCAATTC 298
Query 451 CCCAAGAC-CCGGATAAACGAGACCCAGTTTTTCCAGGTCTCGTGGTGGTTGGTTCTAAT 509
||| | | || | | | | | |||| || ||||||||| |||||||||| ||
Sbjct 299 CCC-ATTCTCC---T---CCTG--CAAACTTTT-CAAGTCTCGTGGCGGTTGGTTCTGAT 348
Query 510 ATCTACAACATTGCCCCACGTAG-CCCCTTAACCCA-TA-ACTTCTC-CCATACCATCTC 565
||||||||||||| || | || || ||| | | || ||| | || ||||
Sbjct 349 ATCTACAACATTG------GTGGATCCATTTACCTAGGACCCTCCTCGTC-TAGTGTCTC 401
Query 566 CATACTGGATT-GCTGTTCTCACACATGGCACGATGCTCCTTGCTTGCAAATGAAGATGA 624
|| ||||||| | | ||||||| |||| ||| ||||| |||||| || || |||
Sbjct 402 GATTCTGGATTCCCAG-TCTCACATGTGGCGCGAGGCTCCAAGCTTGCGGGTGGAGCTGA 460
Query 625 CGACATTTTCTGCTAGCGTACTTGATCA-AAAGATATATGTAGCAGGATGCT--GTA-A- 679
| || |||||||||||| ||||| || ||||||||||||||||||| ||| | |
Sbjct 461 TGTCACATTCTGCTAGCGTCCTTGA-CAGAAAGATATATGTAGCAGGAAGCTACAAAGAT 519
Query 680 GG--ATGGCTATTCGAATTCCTATAAGAACTTGATGGAGGTGTTCGACACAAAGACACAG 737
|| ||||| |||| || |||| |||||||||| | ||||||||||||||||| |||||
Sbjct 520 GGCAATGGCGATTCCAACTCCTGTAAGAACTTGTTCGAGGTGTTCGACACAAAAACACA- 578
Query 738 ACT-TGGGATCCTAAGCCAATCCCTTGCAGCGAGACATTTGGCGGCCTTTT-CTGCAACA 795
| | ||| ||||| |||| ||||| |||||| ||||| ||| |||| || ||| |
Sbjct 579 AGTGTGGCATCCTGAGCCCATCCCATGCAGCAAGACAAAAGGC-ATTTTTTACTCCAAAA 637
Query 796 -CTGCATGTCTTGACGGAAAGTTCCACGTAATGCGTGACGAC-GATGTG-GTTGCT-TAC 851
| |||||| |||| |||||||| |||| || | |||||| | | | | || | ||
Sbjct 638 GC-GCATGTATTGATGGAAAGTTTCACG---TG-GAGACGACTCACG-GAG-TGGTGTAT 690
Query 852 AATTCCAAGGAAGGTAGATGGGAC-AGAG-T-TGAAAAACAGATTGGTAGGTAT-ATTTA 907
|| ||||||||||||||||||| || | | | | ||| || || | ||||| |
Sbjct 691 GCTTACAAGGAAGGTAGATGGGACAAG-GCTAT-ACCAAC-GA-TGTTTGGTATGAGGGC 746
Query 908 TTCAAAATCTTACTGCGAGATACATAATGTTTTGTACTCT-TGCGATCACGGAAAT-ATC 965
|||| | |||| ||||||||| |||||||||||| || | | | ||| ||| | | ||
Sbjct 747 TTCATATTCTTTTTGCGAGATAAATAATGTTTTGTTCTATATTC-ATCGCGG-AGTGTTC 804
Query 966 -GTTTGGTATGACACTGAGGCAAGAGAT-TGGAG-AGAGTTGAAGGGTTTGGTAGGACTA 1022
| |||||||| ||| || |||| || ||||| | | ||||| |||||| ||||||||
Sbjct 805 AG-ATGGTATGATACTAAGTTAAGA-ATGTGGAGAATA-TTGAAAGGTTTGTTAGGACTA 861
Query 1023 CCTGAGTTCCCTTCTGATAAAAAAG--GGATAAGATTGGCTGATTATGGTGGAAAGATGG 1080
||| |||| | |||| || | | | | ||||||||||||||||||||||||||||
Sbjct 862 CCT-AGTTTAC--CTGA-GAATATGTTTG-TTAGATTGGCTGATTATGGTGGAAAGATGG 916
Query 1081 CGGTTTTGTGGCTCGAGGAGTGGCC-TT-TTAATTTT--TAC-GGCCTT-ACGA-A-GAT 1132
||||||| ||| ||||| | ||| || || | | ||| | || | |||
Sbjct 917 CGGTTTTATGGGAAGAGGA-TCGCCCTTCTTG-TGGGGCTGGTGGCAGAGATGAGATGAT 974
Query 1133 GATTTGGTGTGCAGAGATTACGCTTGAAAAGCGCA---AAAGTGGTGAAATTTGGGGGAA 1189
|||||||||||| | |||| ||||| ||||| ||| ||| | | | ||| ||||||
Sbjct 975 GATTTGGTGTGCCGTGATTGCGCTT-AAAAG-GCACCTAAATTT-T-AGTTTTTGGGGAA 1030
Query 1190 AG-TTGAGTGGTTTGATCATTTGCTTACTA-TCCCTA 1224
|| ||||||||||||||||| ||||||| | ||||||
Sbjct 1031 AGGTTGAGTGGTTTGATCATGTGCTTAC-AGTCCCTA 1066
> AT2G03460.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr2:1043621-1044992 REVERSE LENGTH=1280
Length=1280
Score = 257 bits (139), Expect = 2e-67
Identities = 476/627 (76%), Gaps = 70/627 (11%)
Strand=Plus/Plus
Query 631 TTTCTGCTAGCGTACTTGATCAAAAGATATATGTAGCAGGATGCTG-TAAGGATGGCT-A 688
||||| |||| || ||||||| ||||||||| ||||||||| | || | |||||| | |
Sbjct 523 TTTCTTCTAGTGTCCTTGATCGAAAGATATACGTAGCAGGAAGTTGCT-TGGATGG-TGA 580
Query 689 TTCGAATTCCTATAAGAACTT-GATGGAGGTGTTCGACAC-AAAGACACAGA-CTTGGGA 745
||| | |||||||||| || | | |||||||| ||||| || ||||| | ||||||
Sbjct 581 TTCTTACACCTATAAGAA-TTCGTTCGAGGTGTTTGACACTGAA-ACACA-ATTTTGGGA 637
Query 746 TCCT-A-AGCCAATCCCTTGCAGCGAGACATTTGGCGGCCTTTT-C---TGC--AACACT 797
|||| | | || || |||||||| |||| ||| | |||| | ||| ||| |
Sbjct 638 TCCTGATA-CC-ATTACTTGCAGCAAGACGGAAGGC-GATTTTTACGGATGCGGAAC-C- 692
Query 798 GCATGTC-TTGACGGAAAGTTCCACGTAATG-C-GT--G------ACGACGATGTGGTTG 846
||||| | |||||||| ||||||| || || | || | | || || | |||||
Sbjct 693 GCATG-CATTGACGGAGAGTTCCATGTGGTGCCTGTAGGTCAAAAAAGA-GAGGCGGTTG 750
Query 847 CTTACAATTCCAAGGAAGGTAGATGGGACA-GAGTTGAAAAACAGATTGG-T-AGGTATA 903
|||||||||||||||||||||||||||||| | |||| |||| || || | | ||||
Sbjct 751 CTTACAATTCCAAGGAAGGTAGATGGGACATG-GTTGGCCAACAAAT-GGATCAT-TATA 807
Query 904 T-TTATTCAAAATCTTACTGCGAGATACATAATGTTTTGTACTCTTGCGA-TCACGGAAA 961
|| |||| |||| |||||||||| ||||||||||||||||| | ||| |||
Sbjct 808 AGTT-TTCAGCTTCTT---GCGAGATACAGAATGTTTTGTACTCTTGT-ACTCATGGAG- 861
Query 962 TAT-C-GTTTGGTATGACACTGAGGCAAGAGAT-TGGAGAGAGTTGAAGGGTTTGGTAGG 1018
| | | | | ||||||||||| | |||| ||| |||||||| |||||||||||||||||
Sbjct 862 TGTTCAGAT-GGTATGACACTAACGCAAT-GATGTGGAGAGATTTGAAGGGTTTGGTAGG 919
Query 1019 ACTACCTGA-GTTCCCTTCTGATAAAAAAGGGATAAGATTGGCTGATTATGGTGGAAAGA 1077
||||||| | |||| ||||| | || | |||| |||||||||||||| ||||| |
Sbjct 920 ACTACCT-ATGTTCGGTTCTGGTGCCAATGT--TAAG-TTGGCTGATTATGGAGGAAA-A 974
Query 1078 TGG-CGGTTTTGTGGCTCGAGGAGTGGCCTT-T--TA-ATTTT-TA-CGGCCT-TACGAA 1129
| ||||||||||| ||||||| ||||| | | | | || |||| | || |||
Sbjct 975 TTAACGGTTTTGTGGGAGGAGGAGTTGCCTTCTCGTGGACCTGATAGCGGC-TATAAGAA 1033
Query 1130 GATGATTTGGTGTGCAGAGATTACGCTTGAAAAGCGCAAAAGTGGTGAAATTTGGGGGAA 1189
||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct 1034 GATGATTCGGTGTGCAGAGATTGCGCTTGAAAGGCGCAAAAGTTGTGAAATTTGGGGGAT 1093
Query 1190 AGTTGAGTGGTTTGATCATTTGCTTAC 1216
||||||||||||| | || |||||||
Sbjct 1094 TGTTGAGTGGTTTGGTGATGTGCTTAC 1120
> AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:15475786-15476871 FORWARD LENGTH=876
Length=876
Score = 191 bits (103), Expect = 2e-47
Identities = 141/160 (88%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 161 GTCACTTCCCTATGATTTGCTATTCAACTGCCTAGCCCGGGTCTCAAGGTTGTACTATCC 220
|||||||||| |||||||| |||| | |||| | || ||||||||||| ||||| |||||
Sbjct 27 GTCACTTCCCGATGATTTGATATTGAGCTGCGTCGCACGGGTCTCAAGATTGTATTATCC 86
Query 221 CACTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCCTTGCTTCACCCGAGCTTTACAG 280
||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct 87 GGCTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCATAGCTTCACCGGAGCTTTACAA 146
Query 281 GGCCCGCTCACTCTTGGGCCGCACCGAGAGTTGTCTCTAT 320
| |||| |||||||||| |||||| |||||||||||||||
Sbjct 147 GACCCGATCACTCTTGGACCGCACGGAGAGTTGTCTCTAT 186
Score = 150 bits (81), Expect = 3e-35
Identities = 517/716 (72%), Gaps = 76/716 (11%)
Strand=Plus/Plus
Query 582 TCTCACACATGGCACGA-TGCTCCTTGCTTGCAAATGAAGATGACGACATTTTCTGCTAG 640
||| |||| |||||||| || ||| | |||| ||||| | | | ||| | ||||| |
Sbjct 202 TCTAACACGTGGCACGAGGGC-CCTAGGTTGCGGGTGAAGCTAATGTCATGTACTGCTTG 260
Query 641 CGTACTTGATCAAAAGATATATGTAGCAGGATGCTGTAAGGATGGCTATTCGAATTCCTA 700
||| |||||| |||||||||||||| ||||| | || || ||||| || | ||| |
Sbjct 261 CGTTCTTGATGAAAAGATATATGTATCAGGAAGATGCAAAGATGG-----CG-ACTCC-A 313
Query 701 TAAGAACTTGATGGAGGTGTTCGACACAAAGACACAGACTTGGGATCCTAAGCCAATCCC 760
| | || | | | ||||| |||||||| ||||| |||||||||||| | | ||||
Sbjct 314 T--G-AC--GTTCCAAGTGTTTGACACAAATACACAAACTTGGGATCCTTTGTCTGTCCC 368
Query 761 TTGCAGCGAGACATTTGGCGGCCTTT-TCTGCAACACT-G-CATGTCTTGACGGAAAGTT 817
||||||||||||| | | |||| || ||| | | | | || |||||||||| ||
Sbjct 369 TTGCAGCGAGACAAAACAC-GACTTTCACTACAA-AATCGTAAGGT-TTGACGGAAAATT 425
Query 818 CCACGTAATGCG-TGACGACGATGTGGTTGCTTACAATTCCAAGGAAGGTAGATGGGACA 876
||| | || | | || | | ||||| |||||||||||||||||||||||||||||||
Sbjct 426 GCACCTGGTGAGCT-ACAAAGGTGTGGATGCTTACAATTCCAAGGAAGGTAGATGGGACC 484
Query 877 -GAGTTGAAAAACA-G-ATTGGTAGGTA-TATTTATTCAAA--ATC-TTA-CTGCGAGAT 928
| ||| | | || | || | | || || |||| | | || ||| | || | ||
Sbjct 485 TG-GTT-ACAC-CAAGCATAGA-ACATAATAAGTATTTATATGATTGTTATC-GCAATAT 539
Query 929 ACATAATGTTTTGTACTCT-T-GCGATCACGGA-A-AT---A---TC-GT-T--TGGTAT 974
| ||||||| |||| || | | | | ||| | || | || || | ||||||
Sbjct 540 AGGGAATGTTTGGTACACTATTGTAAA-A-GGAGATATCTCAACGTCCGTATGGTGGTAT 597
Query 975 GACACTGAGGCAAGAGATTGGAGAGAGTTGAAGGGTTTGGTAGGACTACCTGAGTTCCCT 1034
||| ||||| |||||| |||||||| ||||||||| |||||||| ||||| ||||||||
Sbjct 598 CACAGTGAGGAAAGAGAGTGGAGAGACTTGAAGGGTATGGTAGGATTACCTAAGTTCCCT 657
Query 1035 -TCTGATAAAAAAGGGATAAGATTGGCTGATTATGGTGGAAAGATGGCGGTTTTGTGGCT 1093
| |||| | || || ||| |||||||||||| |||||||| |||||||||
Sbjct 658 AT-TGATGCTT--GTCTTA-GAATGGTTGATTATGGTGGGAAGATGGCAGTTTTGTGGGA 713
Query 1094 CGAGGAGTGGCCTTTTAATTTTTACGGCCTTACGAAGATGATTTGGTGTGCAGAGATTAC 1153
||| | | |||| || || | |||||||||||||||||| |||||| |
Sbjct 714 CGACTATTTGCCTGGG--------CG-CCGAAAGAAGATGATTTGGTGTGCGGAGATTGC 764
Query 1154 GCTTGAAA-AGCGCAAAAGTGGTG-AAATTTGGGGGAAAGTTGAGTGGTTTGATCATTTG 1211
|||||||| | ||| |||| || |||| ||||| |||||||| ||||||| |||| ||
Sbjct 765 GCTTGAAAGA-CGCGGAAGTT-TGGAAATATGGGGAAAAGTTGAATGGTTTGCTCATGTG 822
Query 1212 CTTACTA-TCCCTA--CA-TGTGAGATAC-TCAAGGTTCTTGCTGCCACTGTTTGA 1262
||||| | |||||| || | ||| || | |||||||||||||||| ||| |||||
Sbjct 823 CTTAC-AGTCCCTAGACAATATGA-ATTCGTCAAGGTTCTTGCTGCTACTCTTTGA 876
> AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:13098141-13099531 REVERSE LENGTH=1391
Length=1391
Score = 167 bits (90), Expect = 3e-40
Identities = 143/169 (85%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 161 GTCACTTCCCTATGATTTGCTATTCAAC-TGCCTAGCCCGGGTCTCAAGGTTGTACTATC 219
|||||||||| |||||||| |||| | | | | || || ||||||| || |||||||
Sbjct 84 GTCACTTCCCGATGATTTGGTATTGGTCAT-CATCGCACGCGTCTCAATATTATACTATC 142
Query 220 CCACTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCCTTGCTTCACCCGAGCTTTACA 279
| | |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 143 CTATTCTCTCACTCGTCTCCAAGAGCTTTCGATCTCTCCTGGCTTCACCGGAGCTTTACA 202
Query 280 GGGCCCGCTCACTCTTGGGCCGCACCGAGAGTTGTCTCTATGTGTGCAT 328
|| | | |||||||||||||||| |||||| ||||||||||||||||
Sbjct 203 AGGTCAGGTCACTCTTGGGCCGCAGGGAGAGTCGTCTCTATGTGTGCAT 251
> AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing
F-box family | chr3:18484001-18484495 FORWARD LENGTH=495
Length=495
Score = 148 bits (80), Expect = 1e-34
Identities = 175/219 (80%), Gaps = 13/219 (6%)
Strand=Plus/Plus
Query 1055 ATTGGCTGATTATGGTGGAAAGATGGCGGTTTTGTGGCTCGAGGAGTGGCCTTTTAATTT 1114
||||||||||||||||||||||||||||||||||||| |||| | | |||| || |
Sbjct 187 ATTGGCTGATTATGGTGGAAAGATGGCGGTTTTGTGGGTCGAACAATCTCCTTGTAGTAA 246
Query 1115 TTACGGCCT-TACGAAGATGATTTGGTGTGCAGAGATTACGCTTGAAAAGCGCA-AAAGT 1172
||||| | || ||| | ||||||||| || |||||| | |||||||| | | |||||
Sbjct 247 CAACGGC-TATAAGAATAAGATTTGGTGCGCGGAGATTGCTCTTGAAAAACA-AGAAAGT 304
Query 1173 GGTGAAATTTGGGG-GAAAGTTGAGTGGTTTGATCATTTGCTTACTA-TCCCT--A-CAT 1227
||||||||||||| ||| ||||||||||||| |||| ||||||| | | ||| | |||
Sbjct 305 TGTGAAATTTGGGGAGAA-GTTGAGTGGTTTGGTCATGTGCTTAC-AGTTCCTTCAACAT 362
Query 1228 GTGA-GATACTCAAGGTTCTTGCTGCCACTGTTTGATGA 1265
|| | | | ||||||| ||||||| ||||||||||||
Sbjct 363 GTTTTGTTGC-CAAGGTTATTGCTGCTACTGTTTGATGA 400
> AT3G09750.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr3:2991655-2992679 REVERSE LENGTH=936
Length=936
Score = 134 bits (72), Expect = 3e-30
Identities = 137/168 (82%), Gaps = 6/168 (4%)
Strand=Plus/Plus
Query 161 GTCACTTCCCTATGATTTGCT-ATTCAAC-TGCCTAGCCCGGGTCTCAAGGTTGTACTAT 218
|||| ||||||||||||| || || | || | | | || | || |||| |||||||||
Sbjct 179 GTCAATTCCCTATGATTTTCTAATGC-ACAT-CGTCGCATGCATCCCAAGATTGTACTAT 236
Query 219 CCCACTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCCTTGCTTCACCCGAGCTTTAC 278
| |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 237 --GAGTCTCTCACTCGTCTCCAAGAGCTTTCGATCTCTCCTAGCTTCACCAGAGCTTTAC 294
Query 279 AGGGCCCGCTCACTCTTGGGCCGCACCGAGAGTTGTCTCTATGTGTGC 326
| || | |||| ||||||||||| ||||||||||||||||| |||
Sbjct 295 AAGGTAAGGTCACAGTTGGGCCGCACAGAGAGTTGTCTCTATGTTTGC 342
> AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr3:2675631-2676693 REVERSE LENGTH=1063
Length=1063
Score = 97.1 bits (52), Expect = 4e-19
Identities = 269/369 (73%), Gaps = 33/369 (9%)
Strand=Plus/Plus
Query 840 GTGGTTGCTTACAATTCCAAGGAAGGTAGATGGGA-CA--GAGTTGAAAAACAGATTGGT 896
||| ||||||||||||||||||||||||||||||| || ||||| | | |||
Sbjct 623 GTGTTTGCTTACAATTCCAAGGAAGGTAGATGGGATCACCTAGTTGGACTTGGGGCGGGT 682
Query 897 AGGTATATTTATT-CAAAATCTTACTGCGAGATACATAATGTTTTGTACTCTTGCGAT-C 954
|| | || | || || | ||||| |||| |||| |||| |||| |||||| || || |
Sbjct 683 AGTTTTA-TGCTTCCAGATTCTTATTGCGTGATAGATAACGTTTCGTACTC-TG-TATCC 739
Query 955 -ACGGAAAT-ATC-GTTTGGTATGACACTGAGGCAAG-AGATTGGAGAGAGTTGAAGGGT 1010
| || ||| || | |||||||||||||||| ||| || |||| ||| |||| ||||
Sbjct 740 GATGG-AATGTTCAG-ATGGTATGACACTGAGGTAAGAAG-GTGGAAAGATTTGAGGGGT 796
Query 1011 TTGGTAGGA-CTACCTGAGTTCCCTTCTGATAAAAAAGGGATAAGATTGGCTGATTATGG 1069
|| || | |||||| ||||| || | | | | | | | |||||||||||||||
Sbjct 797 TT-GTTTCAGCTACCTAAGTTCTCTGCGGGT--GCTTGTG-TTATATTGGCTGATTATGG 852
Query 1070 TGGAAAGATGGCGGTTTTGTGGC-TCGAGGAGTGGCCTTTTAATTTTTACGGCCTT-ACG 1127
||||||||||||||| |||||| || | | || |||| | || | ||| || |
Sbjct 853 TGGAAAGATGGCGGTCTTGTGGGATC-A--ATTG-CCTTATCATCAT---GGCTTTCAT- 904
Query 1128 AAGATGATTTGGTGTGCAGAGATTACGCTTGAAAAGCGCAAAAGTGGTGAAATTTGGGG- 1186
|||| |||| |||||| | |||| ||||||||| ||||| |||| || | ||| |||
Sbjct 905 AAGACGATTCAGTGTGCGGTGATTGCGCTTGAAAGGCGCACAAGTTTTGTA-TTTCGGGA 963
Query 1187 GAAA-GTTG 1194
|||| ||||
Sbjct 964 GAAAAGTTG 972
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63102085065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5