BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921495 Length=279 Score E Sequences producing significant alignments: (Bits) Value AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:... 418 1e-116 AT2G18917.1 | Symbols: | other RNA | chr2:8197114-8198103 FORW... 239 1e-62 > AT2G18915.2 | Symbols: LKP2, ADO2 | LOV KELCH protein 2 | chr2:8194572-8197483 REVERSE LENGTH=2284 Length=2284 Score = 418 bits (226), Expect = 1e-116 Identities = 244/253 (96%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1 GGGTGTGTAAGCAAAATCAAATGGAGTGGGATAGTGATTCCGATCTCAGCGGGGGAGATG 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 221 GGGTGTGTATGCAAAATCAAATGGAGTGGGATAGTGATTCCGATCTCAGCGGTGGAGATG 280 Query 61 AAGTGGCGGAGGATGGATGGTTCGGCGGAGGTAACAGAGCGATTCCGTTTCCGGTAGGTA 120 ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| Sbjct 281 AAGTGGCGGAGGATGGATGGTTCGGTGGAGATAACGGAGCGATTCCGTTTCCGGTAGGTA 340 Query 121 GTCTTCCTGGAACGGCGCCGTGTGGTTTTGTGGTCAGCGATGCTCTTGAACCTGATAACC 180 |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 341 GTCTTCCTGGCACGGCGCCGTGTGGGTTTGTGGTCAGCGATGCTCTTGAACCTGACAACC 400 Query 181 CTATCATTTATGTTAACACTGTTTTTGAGATTGTTACTGGTTATCGAGCTGAGGAAGTTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 401 CTATCATTTATGTTAACACTGTTTTTGAGATTGTTACTGGTTATCGAGCTGAAGAAGTTA 460 Query 241 TTGGTCGAAATTG 253 ||||||||||||| Sbjct 461 TTGGTCGAAATTG 473 > AT2G18917.1 | Symbols: | other RNA | chr2:8197114-8198103 FORWARD LENGTH=831 Length=831 Score = 239 bits (129), Expect = 1e-62 Identities = 143/150 (95%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 1 GGGTGTGTAAGCAAAATCAAATGGAGTGGGATAGTGATTCCGATCTCAGCGGGGGAGATG 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 150 GGGTGTGTATGCAAAATCAAATGGAGTGGGATAGTGATTCCGATCTCAGCGGTGGAGATG 91 Query 61 AAGTGGCGGAGGATGGATGGTTCGGCGGAGGTAACAGAGCGATTCCGTTTCCGGTAGGTA 120 ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| Sbjct 90 AAGTGGCGGAGGATGGATGGTTCGGTGGAGATAACGGAGCGATTCCGTTTCCGGTAGGTA 31 Query 121 GTCTTCCTGGAACGGCGCCGTGTGGTTTTG 150 |||||||||| |||||||||||||| |||| Sbjct 30 GTCTTCCTGGCACGGCGCCGTGTGGGTTTG 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 12818275995 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5