BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921583
Length=3053
Score E
Sequences producing significant alignments: (Bits) Value
AT1G26680.1 | Symbols: | transcriptional factor B3 family prot... 1995 0.0
> AT1G26680.1 | Symbols: | transcriptional factor B3 family protein
| chr1:9219463-9223649 FORWARD LENGTH=3308
Length=3308
Score = 1995 bits (1080), Expect = 0.0
Identities = 1423/1580 (90%), Gaps = 58/1580 (4%)
Strand=Plus/Plus
Query 1246 TGCTTGGAGATAAAGAAAAGGAAGTATTGGTCAAGATGCAGAGCTTCTGTAGAAAACATG 1305
||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 1242 TGCTTGGAGGTAAAGAAAAAGAAGTATTGGTCGAGATGCAGAGCTTCTGTAGAAAACATG 1301
Query 1306 GATGATGATCAGA-C--C------AACA--TC--G---G-A-A-A--CAGT-----T-CA 1338
||||||||||||| | | |||| || | | | | | ||| | ||
Sbjct 1302 GATGATGATCAGACCAACATTGGAAACAGTTCAAGAAAGAAGAGAGTGAGTAAGAATCCA 1361
Query 1339 AGAAAGAACGTAGAGTCTTCATCATACCATTCTAGTTTTGAGGGATCAGTCAATCCTTCA 1398
||| |||| ||||||||||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct 1362 AGAGAGAAAGTAGAGTCTTCATCAGACCATTCTAGTTTTGTGGGATCTGTCAATCCTTCA 1421
Query 1399 AGCCTATACAAAGATCAACTGTATCTTCCAAGGAACTTTGTGAGCTCAAATGGTT-TGGA 1457
||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||
Sbjct 1422 AGCCTATACAAAGATCAACTGTATCTTCCAAGGAATTTTGTGAGCTCAAAT-TTTCTGGA 1480
Query 1458 CAAAAGATGCAGTGAGATAGTGTTAAAGAATGAAAGGGGATAAAAAATGACTTTAGTTTT 1517
||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||
Sbjct 1481 CAAAAGATGCAGTGAGATAGTTTTAAAGAATGAACGGGGAGAAAAAAGGACTTTAGTTTT 1540
Query 1518 GAAACACTTCAAACAAA-ACCTTACTTTTCTCAAAAAAGGCTGGACCAGTTTCTGTCAAG 1576
||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1541 GAAACACTTCAAA-AAAGACCTTACTTTTCTCAAAAAAGGCTGGACTAGTTTCTGTCAAG 1599
Query 1577 TTAACAGGATCAAAGCTGGAGATTCCTTCAAGTTTAAACTGGTTGGAACCTGGAATAAAC 1636
| || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1600 TAAATAGGATCAAAGCTGGAGATTCCTTCAAGTTTAAACTGGTTGGAACATGGAACAAAC 1659
Query 1637 CTGTTCTTACTTTGTGCCCTACAGAATCCAACCATCACAAAACTCCATTAGAGTGTTCAG 1696
|||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct 1660 CTGTTCTTTCTTTGTGCCCTACAGAAACCAACTATCACAAAACTCCATTAGCGTGTTCAG 1719
Query 1697 AAGGTAACAAATCCGAAGAAAATGAAGAGGAGGATATTAAAGACAAGAATACCTCTCAGG 1756
| ||||||||||||||||||| ||||||||||| || | |||||||||||||||| || |
Sbjct 1720 AGGGTAACAAATCCGAAGAAAGTGAAGAGGAGGGTACTGAAGACAAGAATACCTCACAAG 1779
Query 1757 ATTGCTTGGAGGTAAAGAAAAGGAAGTATTGGTCAAAATGCAGAGCCTCTGCAGAGAACA 1816
||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1780 ATTGCTTGGAGGTGAAGAAAAGGAAGTATTGGTCAACATGCAGAGCTTCTGCAGAGAACA 1839
Query 1817 TGGATGATGATCAAACCAACATTGGAAGCAGTTCAAGAA-AGAAGAGAGTGAAGAAAAAT 1875
| ||||||||||| ||||| ||||||| |||||||| || ||||||||||||||||||||
Sbjct 1840 TAGATGATGATCAGACCAATATTGGAAACAGTTCAA-AAGAGAAGAGAGTGAAGAAAAAT 1898
Query 1876 CCAATAAAGAAAGCAGACTCTTCATCAGACCATTCTAGTTTTGTGGCTAATGTCACAGCT 1935
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1899 CCAGTAAAGAAAGCAGAGTCTTCATCAGACCATTCTAGTTTTGTGGCTAATGTCACAGCT 1958
Query 1936 TCAAGCCTAAACTGTGATAGACTGTATTTACCACTAGGTTTCGCGAGGTCAAACGGTCTA 1995
||||||||||||| |||| ||||||||||||||||| |||||| ||| ||||||||||||
Sbjct 1959 TCAAGCCTAAACTATGATCGACTGTATTTACCACTAAGTTTCGTGAGTTCAAACGGTCTA 2018
Query 1996 GACAAAATGAGCGGTAAGAAGGTTGTTCTTCTTAACGAAGAAGGACGAACATGGAAGTTA 2055
|| ||||||| ||||||| || | ||||||||||| |||||||||| | ||||||||||
Sbjct 2019 GATAAAATGAACGGTAAGGAGATCGTTCTTCTTAATGAAGAAGGACTATCATGGAAGTTT 2078
Query 2056 AATTTGAAATACAACAAAGCAGGCATGCAGACTTATGTCAGACCTGGTTGGAAAAGATTC 2115
|||||||| |||||| ||||||||| ||| ||||||||||||||||||||| |||||||
Sbjct 2079 AATTTGAAGTACAACCAAGCAGGCAAGCATACTTATGTCAGACCTGGTTGGTCAAGATTC 2138
Query 2116 TGTGATGCAAATGGGATGAGTCAAGATCAACAATTTACATTCAAACTGGTCCAAAAACAT 2175
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 2139 TGTGATGCAAATGGGATGAGCCAAGGTCAACAATTTACATTCAAACTGGTCCAAAAACAT 2198
Query 2176 GGACCACCTGTCATGCGTTTGTA-CCTTGCAG--AACATAGACCAAAATCAGAATCTTCA 2232
||||||||||||||| |||| | ||| ||| ||||||||||||| ||||||||||||
Sbjct 2199 GGACCACCTGTCATGTATTTG-AGCCT--CAGTGAACATAGACCAAAGTCAGAATCTTCA 2255
Query 2233 TCGCACGGTTCCTATTTGGTGGGATCTGTCACTGCTTCAAGCATAAACAAAGATAAGCTG 2292
|||||| |||||||||| || |||||||||||||||||||||||||| |||||||| |||
Sbjct 2256 TCGCACCGTTCCTATTTTGTAGGATCTGTCACTGCTTCAAGCATAAAGAAAGATAAACTG 2315
Query 2293 TATTTACGGAAGAGTTTTGTGAGCTCAAATGGTCTGGACAAAGGATGCAAGAAGATAGTT 2352
|||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 2316 TATTTATGGAAGAGTTTTGTGAGCTCTAATGGTCTGGACAAAGGATGCAAGAAGATAATT 2375
Query 2353 TTAAAGAACGAATGGGGAAGAGAATGGAATTTAGTCTTCAGACACTACAAATCACACTGC 2412
|||||||| ||||||||||||||||||| |||||||| | ||||||||||||| |||||
Sbjct 2376 TTAAAGAATAAATGGGGAAGAGAATGGAAATTAGTCTTGAAACACTACAAATCAAACTGC 2435
Query 2413 TTTACTATTATCAAACGAGGCTGGGCCAGTTTCTGCCAAGGCAACGGATTAAAAGCTGGA 2472
|||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||
Sbjct 2436 TTTACTATTATCAAACGAGGCTGGACCAGTTTCTGCCAAGGCAACGGTTTGAAAGCTGGA 2495
Query 2473 GATTCCTTCAAGTTTAAACTGGTTGGAACAGGGGAAAAGCCTGTTCTTTCTTTGTGCCCT 2532
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2496 GATTCCTTCAAGTTCAAACTGGTTGGAACCGGGGAAAAGCCTGTTCTTTCTTTGTGCCCT 2555
Query 2533 GCAGAATCCAGT--TG------T-------GAGTGTCCAGAAGGTAGT-GATGATGTAAA 2576
||||||||||| || | |||||||||||||||| | |||||||| ||
Sbjct 2556 GCAGAATCCAGCCATGAAAAAATTCCATTAGAGTGTCCAGAAGGTA-TAGATGATGTCAA 2614
Query 2577 GTCCCTCTCCTCAAATTCTAGCAGCGGAGATGACAGTAGCAGATCCGAAGAA-GTTGAAG 2635
|| |||||||||||| ||||||| |||||||||||||| |||||||||||| | ||||
Sbjct 2615 TTCACTCTCCTCAAATCCTAGCAGTGGAGATGACAGTAGTAGATCCGAAGAAAGC-GAAG 2673
Query 2636 AGGAGAGTATGGAAGACAAGAACATCTCACAGGATTGCTTGGAGATCAAGAAAAGGAAGT 2695
|||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 2674 AGGAGAATATGGAAGACAAGAACATCTCACAGGATTGCTTGGAAACCAAGAAAAGGAAGT 2733
Query 2696 ATTGCTGTTCATCTTCATATAGTCAAAACCGATTTGTGACATTAACTCTTACACTGTCCG 2755
|||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2734 ATTGCTCTTCATCGTCATATAGTCAAAACCGATTTGTGACATTAACTCTTACACGGTCCG 2793
Query 2756 CTTTTCAAACCTACAAACTG 2775
||||||||||||| ||||||
Sbjct 2794 CTTTTCAAACCTATAAACTG 2813
Score = 1581 bits (856), Expect = 0.0
Identities = 1043/1134 (92%), Gaps = 10/1134 (1%)
Strand=Plus/Plus
Query 9 GAGGTGTTCAACAATGGCGGATCAATCTCTTCTACACTCTCCGATCAAACCACATTTC-T 67
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 77 GAGGTGCTCAACAATGGCGGATCAATCTCTTCTACACTCTCCGATCAACCCACATTTCTT 136
Query 68 TCAAGCCTCTTCTTCA-AGGCTTTCGCACTCACCTCAACATTCCTGTTGCTTTCTTCTCG 126
|| ||||| ||||| | || | |||||||||||||||||||||||| ||||||||||||
Sbjct 137 TC-AGCCTATTCTT-ACAGAATCTCGCACTCACCTCAACATTCCTGTAGCTTTCTTCTCG 194
Query 127 AAGCATGTTGAAGGAAAAAACGATCAAAACAAGATTGCGAAACTGAGATCAGACGCGTCA 186
|||||||||||||||| |||| | |||||||||| || || || ||||||||||||||
Sbjct 195 AAGCATGTTGAAGGAAGAAACAACCAAAACAAGACTGTGACGCTAAGATCAGACGCGTCG 254
Query 187 GAGAAAACTTGGTTAGTGAAGATGGACGGTTTGAATTTAACCGACGGGTGGGAAGATTTT 246
|| ||||||||||||||||||||||||||| | || |||||||||| ||||||||||||
Sbjct 255 GATAAAACTTGGTTAGTGAAGATGGACGGTCTAAAACTAACCGACGGATGGGAAGATTTT 314
Query 247 GCCTTTGCACATGATCTCCGAATTGGTGACATTGTCATTTTCAGACATGAAGGAGAAATG 306
||||||||||||||||| |||| ||||||||| ||| ||||||||| |||||||||||||
Sbjct 315 GCCTTTGCACATGATCTTCGAACTGGTGACATCGTCGTTTTCAGACTTGAAGGAGAAATG 374
Query 307 GTGTTTCATGTCACAGCTTTAGGACCAAGTTGTTGTGAGATTCAATATTATACATCATCT 366
||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct 375 GTGTTTCATGTCACAGCTTTAGGACCAAGCTGTTGCGAGATTCAATATCATACATCATCT 434
Query 367 CACAACATCAATGATGATGATCGTAATGATCAGACCAACATTGCTTCAAGAAACAGTGAA 426
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 435 CACAATATCAATGATGATGATCGTAATGATCAGATCAACATTGCTTCAAGAAACAGTTCA 494
Query 427 AGAGTGAAGAAGAATCCCA-GAAAGAAAGTAGAGTCTTCTTTAGACCATTCTCGTTTTGT 485
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 495 AGAGTGAAGAAGAAT-CCACGAAAGAAAGTAGAGTCTTCTTTAGACCATTCTCGTTTTGT 553
Query 486 GGCAAAAGTCTCAGCTTGGGGCCTAAGAAATGATCGACTGTATATACCACTAAGTTTCGC 545
||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||
Sbjct 554 GGCAAAAGTCTCAGCTTGGTGCCTAAGCAATGATAGACTGTATATACCACTAAGTTTCGC 613
Query 546 GAGGTCAAACGGTCTGAACAAAATCAACAGTAAGAAAATCTATCTTTACAACGAAGCAGG 605
|||| |||||||||||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct 614 CAGGTTAAACGGTCTGAACAAAATCAACAGTAAGAAAATCTATCTTCAGAACGAAGAAGG 673
Query 606 AAGATCATGGAAGTTAGATTTGAAACACGACAAATCAGGCATGCATACTTATATCCAATC 665
||||||||||||||||| ||||| ||| ||||||||||||||||| |||| | |||||||
Sbjct 674 AAGATCATGGAAGTTAGTTTTGAGACATGACAAATCAGGCATGCAAACTTTTGTCCAATC 733
Query 666 CGGTTGGAGAAGTTTCTGCGCTGCAAATGGGATTAGGCAAGGCCAATATACATTCAAACT 725
|||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||||||
Sbjct 734 CGGTTGGAGAAGATTCTGCTCTGAAAATGGGATTAGGCAAGGTCAATATACATTCAAACT 793
Query 726 TGTCCGAAAATCGGCACCATCTCTCATCCGTTTGTGCCGCGAAAAAGCTAAACCAAAACA 785
|||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||
Sbjct 794 TGTCCGAAAATCAGCACCACCTGTCATCCGTTTGTGCCGCGCAAAAGCTAAACCAAAACA 853
Query 786 AAGATCAGTTGCAGAATCTTCATCAGACCAATCTTGTTTTGAGGGATCTGTCAGTCCTTC 845
||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct 854 AAGATCAGTTGCAGAATATTCATCAGACCATTCTTGTTTTGAGGGATCTGTCACTCCTTC 913
Query 846 AAGCCTAAGAAATAATCAACTGTTTCTTCCAAGGAGCTTCGTGAGCTCAAATAGTCTGGA 905
||||||||||||| ||| ||||| ||||||||||||||| |||| ||||||| |||||||
Sbjct 914 AAGCCTAAGAAATGATCTACTGTATCTTCCAAGGAGCTTTGTGAACTCAAATCGTCTGGA 973
Query 906 GAAAAGATGCAGTGAGATAGTTTTAAAGAATGAACAGGGAATAAAATGGCCTTCAGTTTT 965
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 974 CAAAAGATGCAGTGAGATAGTTTTAAAGAATGAACAGGGAGTAAAATGGCCTTTAGTTTT 1033
Query 966 GAAACATTACAAAACAGTCACTTATCTTACAAAAGGCTGGACTAGTTTCTGTCAAGTAAA 1025
||||| || |||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1034 GAAACGTTTCAAATCAGTCACTTATCTCCCAAAAGGCTGGACTAGTTTCTGTCAAGTAAA 1093
Query 1026 CAGGATCAAAGCTGGAGATTCCTACAAGTTTAAACTGGTTGGAACCTGGACGAAACCTGT 1085
|||||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 1094 CAGGATCAAAGCAGGAGATTCATTCAAGTTTAAACTGGTTGGAACCTGGAAAAAACCTGT 1153
Query 1086 TCTTTCTTTGTGTCCTACA-AATTCTAATCA-TGACAAAACTCCATTAGAGTGT 1137
||||||||||||||| ||| ||| | || || | ||||||||||||||||||||
Sbjct 1154 TCTTTCTTTGTGTCCGACACAATCC-AA-CAATCACAAAACTCCATTAGAGTGT 1205
Score = 446 bits (241), Expect = 7e-124
Identities = 332/375 (89%), Gaps = 9/375 (2%)
Strand=Plus/Plus
Query 1356 TTCATCATACCATTCTAGTTTTGAGGGATCAGTCAATCCTTCAAGCCTATACAAA-GATC 1414
||||||| |||||||| ||||||||||||| |||| ||||||||||||| | ||| ||||
Sbjct 872 TTCATCAGACCATTCTTGTTTTGAGGGATCTGTCACTCCTTCAAGCCTA-AGAAATGATC 930
Query 1415 AACTGTATCTTCCAAGGAACTTTGTGAGCTCAAATGGTTTGGACAAAAGATGCAGTGAGA 1474
||||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||
Sbjct 931 TACTGTATCTTCCAAGGAGCTTTGTGAACTCAAATCGTCTGGACAAAAGATGCAGTGAGA 990
Query 1475 TAGTGTTAAAGAATGAA-AGGGGATAAAAAAT-GACTTTAGTTTTGAAACACTTCAAACA 1532
|||| |||||||||||| | |||| ||||| | ||||||||||||||| ||| || |
Sbjct 991 TAGTTTTAAAGAATGAACA-GGGA-GTAAAATGGCCTTTAGTTTTGAAACGTTTC-AA-A 1046
Query 1533 AAACCTTACTTTTCTCAAAAAAGGCTGGACCAGTTTCTGTCAAGTTAACAGGATCAAAGC 1592
| | |||| |||| |||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1047 TCA-GTCACTTATCTCCCAAAAGGCTGGACTAGTTTCTGTCAAGTAAACAGGATCAAAGC 1105
Query 1593 TGGAGATTCCTTCAAGTTTAAACTGGTTGGAACCTGGAATAAACCTGTTCTTACTTTGTG 1652
|||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 1106 AGGAGATTCATTCAAGTTTAAACTGGTTGGAACCTGGAAAAAACCTGTTCTTTCTTTGTG 1165
Query 1653 CCCTACAGAATCCAACCATCACAAAACTCCATTAGAGTGTTCAGAAGGTAACAAATCCGA 1712
|| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1166 TCCGACACAATCCAACAATCACAAAACTCCATTAGAGTGTTCAGAAGGTAACAAATCCGA 1225
Query 1713 AGAAAATGAAGAGGA 1727
||||| |||||||||
Sbjct 1226 AGAAAGTGAAGAGGA 1240
Score = 390 bits (211), Expect = 4e-107
Identities = 264/287 (92%), Gaps = 14/287 (5%)
Strand=Plus/Plus
Query 2778 TCTTCCGCGCGGTTTCACGCAGGTGAATGGCATCAACAAGCCAAGGAAGATAACTCTGCT 2837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2889 TCTTCCGCGCGGTTTCACGCAGGTGAATGGCATCAACAAGCCAAGGAAGATAACTCTGCT 2948
Query 2838 GGGTCAAGATGGAGT-AAAACGGGTGGTGGATCTCTATCAGGATAAA-A-TAAGCGGAAC 2894
||||||||||||||| |||| || ||||||||||||||||||| || | || || |||
Sbjct 2949 GGGTCAAGATGGAGTTAAAAAGG-TGGTGGATCTCTATCAGGA-AAGTAGTA-GCAGAAT 3005
Query 2895 AATGAGATTTGGCAAAGGCTGGAGAGAGTTCTGTGAAGCTCAAGGCGTGAAGATAGACGA 2954
|||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 3006 AATGAGATTTGGAAAAGGCTGGAGAGAGTTCTTTGATGCTCAAGGCGTGAAGATAGACGA 3065
Query 2955 GTCCTTTGTGTTGGAACTCATTTGGGAGAAAGAAGCAAGTCCGGTACTTAAGTTCTGCAC 3014
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3066 CTCCTTTGTGTTGGAACTCATTTGGGAGAAAGAAGCAAGTCCGGTGCTTAAGTTCTGCAC 3125
Query 3015 CAAAGTA--AA------CTCTGCTTGAGACTGTTTCCAGAGAAGTAG 3053
||||||| || ||||||||||||||||||||||||||||||
Sbjct 3126 CAAAGTACCAAAGTAAACTCTGCTTGAGACTGTTTCCAGAGAAGTAG 3172
Score = 375 bits (203), Expect = 1e-102
Identities = 303/349 (87%), Gaps = 15/349 (4%)
Strand=Plus/Plus
Query 798 AGAATCTTCATCAGACCAATCTTGTTTTGAGGGATCTGTCAGTCCTTCAAGCCTA-AGAA 856
||| |||||||||||||| ||| |||||| ||||||||||| ||||||||||||| | ||
Sbjct 1373 AGAGTCTTCATCAGACCATTCTAGTTTTGTGGGATCTGTCAATCCTTCAAGCCTATACAA 1432
Query 857 ATAATCAACTGTTTCTTCCAAGGAGCTTCGTGAGCTCAAATAGTCTGGAGAAAAGATGCA 916
| ||||||||| ||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct 1433 A-GATCAACTGTATCTTCCAAGGAATTTTGTGAGCTCAAATTTTCTGGACAAAAGATGCA 1491
Query 917 GTGAGATAGTTTTAAAGAATGAACAGGGA-ATAAAATGGCCTTCAGTTTTGAAACA-TTA 974
|||||||||||||||||||||||| |||| | |||| || ||| |||||||||||| ||
Sbjct 1492 GTGAGATAGTTTTAAAGAATGAACGGGGAGAAAAAA-GGACTTTAGTTTTGAAACACTT- 1549
Query 975 CAAAACAGTC---ACTTATCTTACAAAAGGCTGGACTAGTTTCTGTCAAGTAAACAGGAT 1031
||||| || | |||| ||| | |||||||||||||||||||||||||||||| |||||
Sbjct 1550 CAAAAAAGACCTTACTTTTCTCAAAAAAGGCTGGACTAGTTTCTGTCAAGTAAATAGGAT 1609
Query 1032 CAAAGCTGGAGATTCCTACAAGTTTAAACTGGTTGGAACCTGGA-CGAAACCTGTTCTTT 1090
||||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||
Sbjct 1610 CAAAGCTGGAGATTCCTTCAAGTTTAAACTGGTTGGAACATGGAAC-AAACCTGTTCTTT 1668
Query 1091 CTTTGTGTCCTACA-AATTCTAA-TCATGACAAAACTCCATTAGAGTGT 1137
||||||| |||||| || | || | || ||||||||||||||| ||||
Sbjct 1669 CTTTGTGCCCTACAGAAACC-AACT-ATCACAAAACTCCATTAGCGTGT 1715
Score = 244 bits (132), Expect = 3e-63
Identities = 267/329 (81%), Gaps = 21/329 (6%)
Strand=Plus/Plus
Query 2223 AGAATCTTCATC-GCACGGTTCCTA-TTTGGTGGGATCTGTCACTGCTTCAAGCATAAAC 2280
||| |||||||| | || || ||| ||| ||||||||||||| | |||||||| || ||
Sbjct 1373 AGAGTCTTCATCAG-ACCATT-CTAGTTTTGTGGGATCTGTCAATCCTTCAAGCCTATAC 1430
Query 2281 AAAGAT-AAGCTGTAT-TTACGGAA-GAGTTTTGTGAGCTCAAATGGTCTGGACAAAGGA 2337
|||||| || |||||| || | || || |||||||||||||||| |||||||||| ||
Sbjct 1431 AAAGATCAA-CTGTATCTT-C-CAAGGAATTTTGTGAGCTCAAATTTTCTGGACAAAAGA 1487
Query 2338 TGCAAG-AAGATAGTTTTAAAGAACGAATGGGGAAG-AGAATGGAATTTAGTCTTCAGAC 2395
||| || |||||||||||||||| ||| |||| || | || ||| |||||| || | ||
Sbjct 1488 TGC-AGTGAGATAGTTTTAAAGAATGAACGGGG-AGAAAAAAGGACTTTAGTTTTGAAAC 1545
Query 2396 ACTACAAATCACACTGCTTTACTATTATCAAACGAGGCTGGGCCAGTTTCTGCCAAGGCA 2455
||| |||| | || | ||||| || ||||| ||||||| | |||||||| |||| |
Sbjct 1546 ACTTCAAAAAAGAC--C-TTACTTTTCTCAAAAAAGGCTGGACTAGTTTCTGTCAAGTAA 1602
Query 2456 A-CGGATTAAAAGCTGGAGATTCCTTCAAGTTTAAACTGGTTGGAACAGGGGA-AAAGCC 2513
| ||| | ||||||||||||||||||||||||||||||||||||||| || | ||| ||
Sbjct 1603 ATAGGA-TCAAAGCTGGAGATTCCTTCAAGTTTAAACTGGTTGGAACATGGAACAAA-CC 1660
Query 2514 TGTTCTTTCTTTGTGCCCTGCAGAATCCA 2542
||||||||||||||||||| ||||| |||
Sbjct 1661 TGTTCTTTCTTTGTGCCCTACAGAAACCA 1689
Score = 233 bits (126), Expect = 6e-60
Identities = 215/256 (84%), Gaps = 14/256 (5%)
Strand=Plus/Plus
Query 1754 AGGATTGCTTGGAGGTAAAGAAAAGGAAGTATTGGTCAAAATGCAGAGCCTCTGCAGAGA 1813
|||||||||||||||||||||||| |||||||||||| | ||||||||| |||| ||| |
Sbjct 1237 AGGATTGCTTGGAGGTAAAGAAAAAGAAGTATTGGTCGAGATGCAGAGCTTCTGTAGAAA 1296
Query 1814 ACATGGATGATGATCAAACCAACATTGGAAGCAGTTCAAGAAAGAAGAGAGTGAAG-AAA 1872
|||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||
Sbjct 1297 ACATGGATGATGATCAGACCAACATTGGAAACAGTTCAAGAAAGAAGAGAGTG-AGTAAG 1355
Query 1873 AATCCAATAAAGAAAGCAGACTCTTCATCAGACCATTCTAGTTTTGTGGC-TAATGTCAC 1931
||||||| | |||||| ||| |||||||||||||||||||||||||||| | |||||
Sbjct 1356 AATCCAAGAGAGAAAGTAGAGTCTTCATCAGACCATTCTAGTTTTGTGGGATC-TGTCA- 1413
Query 1932 AGC-TTCAAGCCTAAACTGTGAT-AGACTGTAT-TTACCACTAGG--TTTCGCGAGGTCA 1986
| | |||||||||| || ||| | ||||||| || ||| ||| ||| | ||| |||
Sbjct 1414 ATCCTTCAAGCCTATACAAAGATCA-ACTGTATCTT-CCA--AGGAATTTTGTGAGCTCA 1469
Query 1987 AACGGTCTAGACAAAA 2002
|| ||| |||||||
Sbjct 1470 AATTTTCTGGACAAAA 1485
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151805169518
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5