BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921679 Length=917 Score E Sequences producing significant alignments: (Bits) Value AT1G25400.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1273 0.0 > AT1G25400.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1); Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8911130-8912398 REVERSE LENGTH=1269 Length=1269 Score = 1273 bits (689), Expect = 0.0 Identities = 841/910 (92%), Gaps = 27/910 (3%) Strand=Plus/Plus Query 13 TTTCTGTCATGGAGGTCCCGATAATAAACAGAATAAGCGATTTTGACGTGGGGATAAACT 72 ||||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||| Sbjct 62 TTTCTGTGATGGAGGTCCCGATTATAAACAGAATAGGCGATTTTGACATGGGGATAAACT 121 Query 73 CGATAAACGACCCGTCGTATTTATCTCGAGCTTTGGCCGTCTCCGGCGTCGGAAAGTTAC 132 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 122 CGATAAACGACCCGTCGTATTTATCTCGAGCTTTGGCAGTCTCCGGTGTCGGAAAGTTAC 181 Query 133 ATCAAGCTTATAGTTTCTGGAAATGGGGCGCTTTATTGCTACTTGCATTTTTTGCTTCAT 192 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 182 ATCAAGCTTATAGTTTTTGGAAATGGGGCGCCTTATTGCTACTTGCATTTTTTGCTTCAT 241 Query 193 TTACATCGTTAACTACAAGAATCAAGGCTTTAGTCTCTAGATTAAGAAATGTAAACGTGT 252 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 242 TTACATCGTTAACTACAAGAATCAAGACTTTAGTCTTTAGATTAAGAAATGTAAACGTGT 301 Query 253 CTCTACCTTCCCCAACTCTTTTGTGTAATTACGACAGCGATTCCGATTGGTCTTT-TGCG 311 |||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| | || Sbjct 302 CTCTACCTTCCCAAACTCTTTTATGTAATTACGACAGCGACTCCGATTGGTCTTTCT-CG 360 Query 312 TCAGACTCTTCAGAC-----G-AAGATGATGACGATGACAAAGAAGATGAATCGGTCAAT 365 ||||||||||||||| | ||||||| |||||| ||||||||||||| ||||||||| Sbjct 361 TCAGACTCTTCAGACGAAGAGAAAGATGAGGACGATAACAAAGAAGATGACTCGGTCAAT 420 Query 366 GGAGATTTACGCGTTAAAAGATTTAGTTATTTCCATGATGATGATGATAAGGCTATAAAT 425 || |||| ||||||| |||||||| |||||| |||||||||||||||||||| ||| | | Sbjct 421 GGCGATTCACGCGTTCAAAGATTTGGTTATTACCATGATGATGATGATAAGGGTATTAGT 480 Query 426 GGAAATGTCCCCTGGTTGCGGCGGTGCAGTGGTAGCTTCGGAGACTTGTTAGATTTAGGC 485 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 481 GGAAGTGTCCCCTGGTTGCGGCGGTGCAGTGGTAGCTTCGGAGATTTGTTAGATTTAGGC 540 Query 486 TCGAGCGGAGTCGTGAAGCTTTGGGACAATCTTGATTTCAACGGAGAAGGAAGTCACCGT 545 || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 541 TCAAGCGGAGTCGTGAAGCTTTGGGACAATCTTGATTTCAACGGAGAAGGAAGTC-C-G- 597 Query 546 AAGGCGGTGGCTTCTTTTTTGAGCAAATGCGGCTCTTACTCGTTGTTGTCGTCGGCGGTT 605 | ||||||||||||| |||||||||||||| |||||||| ||||| ||||||||| Sbjct 598 --G----TGGCTTCTTTTTTCAGCAAATGCGGCTCATACTCGTTATTGTCATCGGCGGTT 651 Query 606 TTATTAGCGGCGGAGAAGAAAGGATCCGACGGCCTGGAAGTGAGTGCGTGGGATGCACGC 665 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 652 TTATTAGCGGCGGAGAAGAAAGGATCCGACGGCTTGGAAGTGAGTGCGTGGGATGCACGC 711 Query 666 GCCGGTTTTGGGGTCCCCGCGTTGCTCGCGGAATGGAAGCAGCCGGGGCGGTTACTTGGG 725 | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 712 GTTGGTTTTGGGGTGCCCGCGTTGCTCGCGGAATGGAAGCAGCCGGGAAGGTTACTCGGG 771 Query 726 AAGATCATTAGGGTTGACGTTGGTGACGTGGACAAGATCTACGTCGGTGATGACGTCGGA 785 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 772 AAGATCATTAGGGTTGACGTAGGTGACGTGGACAAGATCTACGTCGGTGATGACGTCGAA 831 Query 786 GGAGAGATTACTGTGGGAGACATGAGGATGGTTAACGGTGCGTTGACGGAACTGACTGAA 845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 832 GGAGAGATTACTGTGGGAGACATGAGGATGGTTAACGGTGCGTTGACGGAACTGACGGAA 891 Query 846 TCAGAGGTTGAG-GGAATGGTGAGAAGACGCCGACGCCGACGCCGTCATTGATGAGCTGA 904 |||||||||||| ||| |||||||||||||| | | ||||||||||||| | ||||| Sbjct 892 TCAGAGGTTGAGAGGA-TGGTGAGAAGACGC--A-G---ACGCCGTCATTGA-G-GCTGA 942 Query 905 CGGTTCCGTT 914 |||| ||||| Sbjct 943 CGGTGCCGTT 952 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44808859124 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5