BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921754
Length=2390
Score E
Sequences producing significant alignments: (Bits) Value
AT1G24320.1 | Symbols: | Six-hairpin glycosidases superfamily ... 2289 0.0
AT1G67490.1 | Symbols: GCS1, KNF | glucosidase 1 | chr1:2528045... 1386 0.0
> AT1G24320.1 | Symbols: | Six-hairpin glycosidases superfamily
protein | chr1:8626315-8630971 REVERSE LENGTH=2528
Length=2528
Score = 2289 bits (1239), Expect = 0.0
Identities = 1416/1503 (94%), Gaps = 6/1503 (0%)
Strand=Plus/Plus
Query 888 ATTTGATGCAAAGTTCAAGGAATGCTTCAACCTTTCTGAAAAGCTTGATCCTGAAACTTT 947
|||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 936 ATTTAATGCTAAGTTCAATGAATGCTTCAACCTTTCTGACAAGCTTGATCCTGAAACTTT 995
Query 948 CGTGGTTGGTAAAGCTGCAATTGGGAACATGCTTGGAGGCATTGGTTACTTCTATGGCCA 1007
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 996 GGTGGTTGGTAAAGCAGCAATCGGGAACATGCTTGGAGGCATTGGTTACTTCTATGGTCA 1055
Query 1008 ATCAAAAATTCATGTTCCTAAAAGTACTCTGGCTAAAAGTGAGGATGATTTCTTGCTATA 1067
|||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1056 ATCAAAGATTCATTTTCCTAAAAGTCCTCTGGCTAAAAGTGAGGATGATTTCTTGCTATA 1115
Query 1068 TTGGCCAGCTGAGCTATACACAGCAGTTCCAAGCCGGCCC-GTGTTTCCTAGAGGATTTT 1126
|||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||
Sbjct 1116 TTGGCCAGCTGAGCTATACACAGCAGTTCCAAGCCGGCCCCG-GTTTCCTAGGGGATTTT 1174
Query 1127 TGTGGGATGAAGGCTTCCATCAATTGTTGATCTGGCGCTGGGATGTCCATATAACCTTAG 1186
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1175 TGTGGGATGAAGGCTTCCATCAATTGTTGATCTGGCGTTGGGATGTCCATATAACCTTGG 1234
Query 1187 AAATCGTTGGAAACTGGTTAGATCTAATGAATATAGATGGATGGATTCCACGGGAGCAAA 1246
|||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 1235 AAATAGTTGGAAACTGGTTAGATTTAATGAATATAGATGGATGGATTCCACGTGAGCAAG 1294
Query 1247 TTTTGGGAGCTGAAGCTCTTAGTAAGATTCCAAAGCAGTACGTTGCTCAGTTCCCAAGTA 1306
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 1295 TTTTGGGAGCTGAAGCTCTCAGTAAGATTCCAAAGCAGTACGTTGTTCAGTTCCCAAGTA 1354
Query 1307 ATGGCAATCCACCTACACTACTTTTGGTGATACGCGATCTGATCAATGGGATACAGACAG 1366
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||
Sbjct 1355 ATGGCAATCCACCTACACTACTTTTGGTCATACGCGATTTGATCAATGGGATACGGACAG 1414
Query 1367 AGAAATTTAGCAAGGCAGAAAGAGATGAAGTCTTGTCATTTCTTGACCGGGCTTTTGTAC 1426
||||||| | | ||||||| |||||| || | |||||||| |||||||||||||||||||
Sbjct 1415 AGAAATTCAACGAGGCAGACAGAGATAAAATATTGTCATTCCTTGACCGGGCTTTTGTAC 1474
Query 1427 GGCTAGATGCATGGTTTAAGTGGTTCAATACTTCCCAAATAGGAAAGGAGAAGGGAAGTT 1486
||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||
Sbjct 1475 GGCTAGATGCATGGTTTAAATGGTTCAATACTTCTCAGATAGGTAAGGAAAAGGGAAGTT 1534
Query 1487 ACTATTGGCATGGCAGAGACAATATAACAAATAAGGAACTAAACCCTCAGTCTCTTTCCT 1546
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1535 ATTATTGGCATGGCAGAGACAATATAACAAATAGGGAACTAAACCCTCAGTCTCTTTCCT 1594
Query 1547 CGGGTTTTGATGATTATCCTCGGGCTTCACATCCAAGTGAAGATGAGAGGCATGTTGACC 1606
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1595 CGGGTTTGGATGATTATCCTCGGGCTTCACATCCAAATGAAGATGAGAGGCATGTTGACC 1654
Query 1607 TCAGATGTTGGATGTATCTTGCAGCAGATTGTATGAACTCCATCCAAGAGTTTATGGGGA 1666
||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1655 TCAGATGCTGGATGTATCTTGCAGCAGATTCCATGAACTCCATCCAAGAGTTTATGGGGA 1714
Query 1667 AAAAAGACAGACTTGTAACGGAGGATTACAGCTCAATTGCCAAGCTGCTTTCAGATTTCA 1726
|||| |||| |||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 AAAATGACATACTTGTGACAGAGGATTACAGCTCAATTGCCAAGCTGCTTTCAGATTTCA 1774
Query 1727 ATCTTCTGAATCAGATGCACTATGACCAGGACCATGGGGCTTACCTTGACTTTGGTAATC 1786
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1775 CTCTTCTGAATCAGATGCACTATGACAAGGACCATGGGGCTTACCTTGACTTTGGTAATC 1834
Query 1787 ATACAGAAGAAGTTCGGTTAATCTGGAAAGAAGTAATT-ACAAAAGATGGACGTTTATCT 1845
|||||||||||||||||||| |||||||||| |||||| || || ||||||| |||||||
Sbjct 1835 ATACAGAAGAAGTTCGGTTAGTCTGGAAAGAGGTAATTCACGAA-GATGGACATTTATCT 1893
Query 1846 CGAGAGCTTGTAAGGGAGACATTTGGGAAGCCAGAGCTAAGATTGGTTCCTCACATTGGT 1905
|||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||
Sbjct 1894 CGAGAGCTTGTAAGGGAGACATATGGGAAGCCAGAGCTAAGATTGGTTCCTCATATCGGT 1953
Query 1906 TACGTCAGCTTCTTTCCCTTCATGTTTAGAATCATCCCAGCGGATTCTTCAATACTCAAC 1965
||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| ||
Sbjct 1954 TACGTCAGCTTCTTTCCCTTCATGTTTAGAATCATCCCAGCTGATTCTTCGATCCTCGAC 2013
Query 1966 AAACAGCTCGATCTCATTTCAAACAGGAACATCGTATGGAGTGACTATGGACTACTTTCA 2025
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2014 AAACAGCTCGATCTCATTTCAAACGGGAACATCGTATGGAGTGACTATGGACTACTTTCA 2073
Query 2026 CTTGCAAAAACTAGTTCTTTGTACATGAAGTATAACACTGAGCATGAAGCACCATATTGG 2085
||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||
Sbjct 2074 CTTGCCAAAACTAGTTCTTTGTACATGAAGTATAACAGTGAGCATCAAGCACCATACTGG 2133
Query 2086 AGAGGTGCTATATGGATGAATATGAACTACATGATTCTTTCTTCCCTGCACCATTACTCT 2145
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2134 AGAGGTGCTATATGGATGAACATGAACTACATGATTCTTTCTTCCCTGCACCATTACTCT 2193
Query 2146 ACAGTGGATGGACCATACCGCAGCAAGGCAAGAACAATATACGAGGAACTAAGGAGCAAT 2205
|||||||||||||| ||| |||||| ||| |||| || |||||||||||||||||||||
Sbjct 2194 ACAGTGGATGGACCGTACAACAGCAAAGCACGAACGATTTACGAGGAACTAAGGAGCAAT 2253
Query 2206 CTAATAAGGAACGTGATTAGAAACTATGACCAGACTGGATAT-ATCTGGGAACACTATGA 2264
||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 2254 CTAATAAGGAACGTGGTTAGAAACTATGACCAGACTGGA-ATTATCTGGGAACACTACGA 2312
Query 2265 TCAAACAAAAGGAACTGGAGAAGGTGCACGTGTCTTCACCGGCTGGTCTGCACTTATCCT 2324
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2313 TCAAACAAAAGGAACTGGAGAAGGTGCACGTGTCTTCACCGGTTGGTCTGCACTTATCCT 2372
Query 2325 CTTAATCATGTCCGAAGAATACCTTCTATTTAAAAAACCGTTTTGATTACCAATATTTGT 2384
||||||||||||||||||||||| ||||||| ||||||| || |||||||||| ||||||
Sbjct 2373 CTTAATCATGTCCGAAGAATACCCTCTATTTTAAAAACCATTATGATTACCAACATTTGT 2432
Query 2385 AAC 2387
|||
Sbjct 2433 AAC 2435
Score = 1286 bits (696), Expect = 0.0
Identities = 826/888 (93%), Gaps = 11/888 (1%)
Strand=Plus/Plus
Query 1 TTTCTC-AATCTATACTTAGTGATGACCGGATTAATCCCATCTGGTGATATCAATCCACT 59
|||||| |||||||||| | |||||||||||||| |||||||||||||||||| |||||
Sbjct 17 TTTCTCAAATCTATACTCA--GATGACCGGATTAAGCCCATCTGGTGATATCAAACCACT 74
Query 60 TTTGGATGATGAATCCCAGAGACCTCGTGTTATTACTCCTTTTCCTTCTCCTAAACTCAC 119
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 75 TTTGGATGATGAATCCCAGAGACCTCGTGTTATCACTCCTTTTCCTTCTCCTAAACTCAC 134
Query 120 CGACTTGTCCATGTTTCAAGGTGATCACAAGGAGAGCATGTATTGGGGAACTTATCGTCC 179
|||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||
Sbjct 135 CGACTTGTCCATGTTTCAAGGTGAGCACAAGGAAAGCTTGTATTGGGGAACTTATCGTCC 194
Query 180 TCAGGTGTATTTTGGAGTTCGAGCCAGAACTCCTAAGTCCCTTGTTGCTGGCTTGATGTG 239
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 195 TCAGATGTATTTTGGAGTTCGAGCCAGAACTCCCAAGTCCCTTGTTGCTGGCTTGATGTG 254
Query 240 GCTCGTTATGAAAGATGGGAAGCAAGTTATGAGGCATTTCTGTGAAAACTCTGCCGATCT 299
|||||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||
Sbjct 255 GCTCGTTATGAAAGATGGAAAGCCTGTTATGAGACATTTCTGTGAAAACTCTAACGATCT 314
Query 300 TAAGTCGTTTGGCTGGAGAGAACACAATGGAAGAGATTTTGGACGGCAAGAGCTGTTTGA 359
|||||| ||||| |||| |||||||||||||||||||||||| || ||||||||||||||
Sbjct 315 TAAGTCATTTGGTTGGAAAGAACACAATGGAAGAGATTTTGGGCGACAAGAGCTGTTTGA 374
Query 360 ACAAGATATGGTTTTGGAGACAAGTTTTGTCAAGTCTAAGGAAGGCAGCCTTGGTTATGG 419
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 375 ACAAAATATGGTTTTGGAGACAAGTTTTGTCAAGTCTGAGGAAGGCAGCCTTGGTTATGG 434
Query 420 AGGAGATTGGTCGATTCGTATCAATGTTAAAAATATGTTGAATGATGATGAAGTAAAGAG 479
|||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||||
Sbjct 435 AGGAGATTGGTCTATTAGAATCAATGTTCAAAATATGTTGAATGATGATGAAGTAAAGAG 494
Query 480 AAGTGCACATCTCTTCTTCTATCTAGCTGATGAAGGTGGCAATGGTGTGAATTTAGGCAA 539
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 495 AAGTACACATCTCTTCTTCTATCTAGCTGATGAAGGTTGCAATGGTGTGAATTTAGGCAA 554
Query 540 AGATGTGTTAGGGCTTAAAGAGAGTTCTGTCCTAGCTTCAGGCTCACGTCAAGATGTAGG 599
|||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 555 AGATGTGTTAAGGCTTAAAGAGAGTTCTGTCTTAGCTTCAGGTTCACGTCAAGATGTAGG 614
Query 600 AAACTGGCAGATGCACTTAAAATCACAGAATCATCTTGAAACACATTATTGCGGTTTCAA 659
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 615 AAACTGGCAGATGCACTTAAAATCACAGAATCATCTTGAAACACATTATTGTGGATTCAA 674
Query 660 GACGCCTGACATTGTCAATCTCTCTAACCTTGTTCAGCAAAATCTCACTGCACAGTTTCA 719
||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 675 GACGCCTGACATTGTCAATCTCTCTGGTCTTGTTCAGCAAAATCTCACTGC----T--CA 728
Query 720 GGAAGGGAAGTCTGGACTACTTCAGCTCTCTGACACGTCGGAAGATTCTTCCAACATTTA 779
||||| |||||||||||||||||||||||||||| | || || || ||||||||||||||
Sbjct 729 GGAAGAGAAGTCTGGACTACTTCAGCTCTCTGACTCATCAGAGGACTCTTCCAACATTTA 788
Query 780 TGTTTTTCAGATTTCCACGACGACCCAATCTACCATAGATATTGCATTTGTCTCTGGGA- 838
||||||||||||||||||||||| |||||| || ||||| ||||| ||||||||||| |
Sbjct 789 TGTTTTTCAGATTTCCACGACGAACCAATCAACTATAGACATTGCCTTTGTCTCTGGAAT 848
Query 839 AAAGAGAAGAAGCTTCCAACATGGAAAAGCGTATAATGAGTCTTACAG 886
||| ||||||| | |||||||||||||| |||||||||||||||||||
Sbjct 849 AAA-AGAAGAAACGTCCAACATGGAAAATCGTATAATGAGTCTTACAG 895
> AT1G67490.1 | Symbols: GCS1, KNF | glucosidase 1 | chr1:25280451-25286596
REVERSE LENGTH=2756
Length=2756
Score = 1386 bits (750), Expect = 0.0
Identities = 1250/1488 (84%), Gaps = 47/1488 (3%)
Strand=Plus/Plus
Query 885 AGAATTTGATGCAAAGTTCAAGGAATGCTTCAACCTTTCTGAAAAGCTTGATCCTGAAAC 944
|||||||||||||||||| || ||||||||||| ||||||||||||| |||| | |||||
Sbjct 1101 AGAATTTGATGCAAAGTTTAATGAATGCTTCAAGCTTTCTGAAAAGCATGATTCAGAAAC 1160
Query 945 TTTCGTGGTTGGTAAAG-CTGCAATTGGGAACATGCTTGGAGGCATTGGTTACTTCTATG 1003
|| | |||||| || | ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1161 ATTGGGGGTTGG-AAGGACTGCAATTGCAAACATGCTTGGGGGCATTGGTTACTTCTATG 1219
Query 1004 GCCAATCAAAAATTCATGTTCCTAAAAGTACTCTGGCTAAAAGT-GAGGATGATTTCTTG 1062
|||||||||||||| ||||||||||||| |||| | || |||| | |||| ||||||||
Sbjct 1220 GCCAATCAAAAATTTATGTTCCTAAAAGCACTCAGCCTGGAAGTCG-GGATAATTTCTTG 1278
Query 1063 CTATATTGGCCAGCTGAGCTATACACAGCAGTTCCAAGCCGGCCCGTGTTTCCTAGAGGA 1122
|| ||||||||||| ||||| |||||||| ||||||||||| || | |||||||| ||
Sbjct 1279 CTGTATTGGCCAGCCGAGCTGTACACAGCTGTTCCAAGCCGACCTTTTTTTCCTAGGGGG 1338
Query 1123 TTTTTGTGGGATGAAGGCTTCCATCAATTGTTGATCTGGCGCTGGGATGTCCATATAACC 1182
||||||||||| ||||| ||||||||||||||||||||||| |||||| | | |||||||
Sbjct 1339 TTTTTGTGGGACGAAGGTTTCCATCAATTGTTGATCTGGCGGTGGGATATTCGTATAACC 1398
Query 1183 TTAGAAATCGTTGGAAACTGGTTAGATCTAATGAATATAGATGGATGGATTCCACGGGAG 1242
|| || ||||||||| |||||||||| ||| |||| |||||||||||||||||||| |||
Sbjct 1399 TTGGATATCGTTGGACACTGGTTAGACCTATTGAACATAGATGGATGGATTCCACGTGAG 1458
Query 1243 CAAATTTTGGGAGCTGAAGCTCTT-AGTAAGATTCCAAAGCAGTACGTTGCTCAGTTCCC 1301
||||||||||| ||||||||| || |||||| ||||| || | | ||| | ||| | |||
Sbjct 1459 CAAATTTTGGGTGCTGAAGCT-TTGAGTAAGGTTCCAGAGGAATTCGTAGTTCAATACCC 1517
Query 1302 AAGTAATGGCAATCCACCTACACTACTTTTGGTGATACGCGATCTGATCAATGGGATACA 1361
||||||||||||||||| || || ||||||||||||| |||||||| ||| ||| |
Sbjct 1518 GAGTAATGGCAATCCACCAACTCTGTTTTTGGTGATACGTGATCTGATTGATGCTATA-A 1576
Query 1362 -GACAGAGAAA--TT-TAGCAAGGCAG-AAAGAGATGAAGTCTTGTCATTTCTTGACCGG 1416
|| || ||| || | || | ||| |||| |||||||| |||||||| ||||| ||
Sbjct 1577 GGATGGA-AAAGTTTGTCGC-A-TCAGAAAAG-GATGAAGTATTGTCATTCCTTGAGCGA 1632
Query 1417 GCTTTTGTACGGC-TAGATGCATGGTTTAAGTGGTTCAATACTTCCCA-AATAGGAAAGG 1474
|||| ||||| || ||||||| |||||| ||||||| ||||||||||| || ||| ||||
Sbjct 1633 GCTTCTGTAC-GCTTAGATGCTTGGTTTCAGTGGTTTAATACTTCCCAGAA-AGGCAAGG 1690
Query 1475 AGAAGGGAAGTTACTATTGGCATGGCAGAGACAATATAACAAAT-AAGGAACTAAACCCT 1533
||| ||||| |||| |||||||||||||||||| | ||||| | || ||||| ||||||
Sbjct 1691 AGATCGGAAGCTACTTTTGGCATGGCAGAGACAACACAACAACTCAA-GAACTTAACCCT 1749
Query 1534 CAGTCTCTTTCCTCGGGTTTTGATGATTATCCTCGGGCTTCACATCCAAGTGAAGATGAG 1593
|| | ||||| ||||| | ||||||||||| |||||||| || || ||||||||||||
Sbjct 1750 AAGACGCTTTCGTCGGGGCTGGATGATTATCCCCGGGCTTCGCACCCTAGTGAAGATGAG 1809
Query 1594 AGGCATGTTGACCTCAGATGTTGGATGTATCTTGCAGCAGATTGTATGAACTCCATCCA- 1652
| |||||||| || ||||| |||||||| ||||| |||||||| ||| | ||||| ||
Sbjct 1810 CGACATGTTGATCTTAGATGCTGGATGTACCTTGCTGCAGATTGCATGCATTCCAT-CAC 1868
Query 1653 AGAG-TTTATGGGGAAAA-AAGACAGACTTGT-AACGGAGGATTACAGCTCAATTGCCAA 1709
|||| ||| | |||||| |||||| |||| | || |||| |||||| |||| || |||
Sbjct 1869 AGAGCTTT-T-AGGAAAAGAAGACAAACTT-TCAAAGGAGAATTACAATTCAACTGTCAA 1925
Query 1710 GCTGCTTTCAGATTTCAATCTTCTGAATCAGATGCACTATGACCAG-GACCATGGGGCTT 1768
|||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct 1926 GCTGCTTTCAAATTTCAATCTTCTGAATCAGATGCACTATGAT-AGTGACTATGGGGCTT 1984
Query 1769 ACCTTGACTTTGGTAATCATACAGAAGAAGTTCGGTTAATCTGGAAAGAAGTAATTACAA 1828
|| |||||||||| |||||||||||| ||||| ||| || |||||||| |||||| |||
Sbjct 1985 ACTTTGACTTTGGCAATCATACAGAAAAAGTTAAGTTGATATGGAAAGAGGTAATT-CAA 2043
Query 1829 -AAGATGGACGTTTATCTCGAGAGCTTGTAAGGGAGACATTTGGGAAGCCAGAGCTAAGA 1887
|| |||| | ||||||||| | ||||||||| |||| |||||||||||| |||||| |
Sbjct 2044 GAAAATGGTCAATTATCTCGACAACTTGTAAGGAAGACTTTTGGGAAGCCAAAGCTAAAA 2103
Query 1888 TTGGTTCCTCACATTGG-TTACGTCAGCTTCTTTCCCTTCATGTTTAGAATCATCCCAGC 1946
|||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct 2104 TTGGTTCCTCAC-TTGGGTTACGTCAGCTTCTTTCCCTTCATGTCTAGAATCATCCCACC 2162
Query 1947 GGATTCTTCAATACTCAACAAACAGCTCGATCTCATTTCAAACAGGAACATCGTATGGAG 2006
|||||| |||| ||| | ||||||||||||||||||||||| |||| |||| |||||||
Sbjct 2163 TGATTCTCCAATTCTCGAGAAACAGCTCGATCTCATTTCAAATAGGAGCATCTTATGGAG 2222
Query 2007 TGACTATGGACTACTTTCACTTGCAAAAACTAGTTCTTTGTACATGAAGTATAACACTGA 2066
||||||||||||| |||| ||||| ||||| |||||| |||| ||||| |||||||||
Sbjct 2223 TGACTATGGACTAGTTTCGCTTGCCAAAACCAGTTCTATGTATATGAAACGTAACACTGA 2282
Query 2067 GCATGAAGCACCATATTGGAGAGGTGCTATATGGATGAATATGAACTACATGATTCTTTC 2126
|||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 2283 GCATGATGCACCATACTGGAGAGGTCCTATATGGATGAACATGAACTACATGATTCTTTC 2342
Query 2127 TTCCCTGCACCATTACTCTACAGTGGATGGACCATACCGCAGCAAGG-CAAGAA-CAATA 2184
||| || |||||||||||| |||||||||||| || | || || | | | || ||||
Sbjct 2343 TTCTCTTTACCATTACTCTATAGTGGATGGACCGTATAG-AGAAAAGTCGA-AAGCAATT 2400
Query 2185 TACGA-GGAACTAAGGAGCAATCTAATAAGGAACGTGATTAGAAACTATGACCAGACTGG 2243
||| | |||||||||||||||| | |||||||||||| ||||||||||| || |||| ||
Sbjct 2401 TAC-ACGGAACTAAGGAGCAATTTGATAAGGAACGTGGTTAGAAACTATTACGAGACGGG 2459
Query 2244 ATATATCTGGGAACACTATGATCAAACAAAAGGAACTGG-AGAAGGTGCACGTGTCTTCA 2302
|| ||||||||||| ||||||||| || ||||| || | |||| | ||| ||||||
Sbjct 2460 GTACATCTGGGAACAATATGATCAAGTTAAGGGAACAGGCA-AAGGCACGCGTCTCTTCA 2518
Query 2303 CCGGCTGGTCTGCACTTATCCTC-TTAATCATGTCCGAAGAATA-CCT 2348
||||||||||||| |||| ||| ||||| ||||| ||||| || |||
Sbjct 2519 CCGGCTGGTCTGCGCTTA-CCTTGTTAATTATGTCAGAAGATTATCCT 2565
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118674088380
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5