BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg921796
Length=1198
Score E
Sequences producing significant alignments: (Bits) Value
AT1G27560.1 | Symbols: | pseudogene of F-box family protein-re... 1085 0.0
AT1G27540.1 | Symbols: | Protein of unknown function (DUF295) ... 1027 0.0
AT1G27580.1 | Symbols: | Protein of unknown function (DUF295) ... 774 0.0
AT1G27550.1 | Symbols: | F-box family protein | chr1:9568813-9... 316 2e-85
> AT1G27560.1 | Symbols: | pseudogene of F-box family protein-related
| chr1:9570855-9571987 REVERSE LENGTH=1133
Length=1133
Score = 1085 bits (587), Expect = 0.0
Identities = 963/1138 (85%), Gaps = 51/1138 (4%)
Strand=Plus/Plus
Query 66 CTTGAGTCTGCAAAGGCCATGCGTTCGACTTTGATTCAGTGGCCAAGAGCCGGATCGCCA 125
||||||||||| |||||||||| |||||||||||||||| |||||| | ||||||| |||
Sbjct 19 CTTGAGTCTGCTAAGGCCATGCATTCGACTTTGATTCAGCGGCCAAAAACCGGATCTCCA 78
Query 126 TTGCTGATGCTGTCTGCAGAAAAGGATGGTTGTCG-TAGTAATAGTGTGTACAACCCAGC 184
|| |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct 79 TTACTGATGCTGTCTTCAGAAAAGGATGGTTGTCGCT-GTAATAGTGTGTACAACCCAGA 137
Query 185 CGATGATAGGGTTGACGAGACGAAGAGTGACCTTTCAGGGTATCGATTCCTTGGAAGCTC 244
|||| ||||||| ||||| ||||||||||| |||| |||||||||||||| ||||||||
Sbjct 138 AGATGGTAGGGTTTACGAGCCGAAGAGTGACTTTTCCGGGTATCGATTCCTGGGAAGCTC 197
Query 245 GGGTAAGTGGTTTCTCGTGGTAGATTCTC-AATTGAAACTCTATATTATAGATGTCTTTA 303
|||||||||||||| ||||||||||||| || |||||||||||||||||||||| ||||
Sbjct 198 AGGTAAGTGGTTTCTGGTGGTAGATTCTCGAA-TGAAACTCTATATTATAGATGTATTTA 256
Query 304 GCGAG-GGTAGGATCGATCTTCCACCACTAGAATCATTGAAAGGTAGCCTTTATAA-AAT 361
||||| | |||||||| |||||||||||||||||||| || |||||||||| ||| | |
Sbjct 257 GCGAGAAG-AGGATCGAACTTCCACCACTAGAATCATTTAAGGGTAGCCTTTTTAAGATT 315
Query 362 TGAGCGAGTA-GGAGAGAATAAAGTCAGGAATATA-TTATTCAGT-G-ATTT-ATCTCCT 416
|| ||| | | |||||| | || |||| | || || | || | | | ||| || || |
Sbjct 316 TG-GCGTG-ACGGAGAGGAGAATGTCAAGCATCTACTAATGGA-TGGTTTTTCATATCGT 372
Query 417 -GGGG--ATCCTCATACTGCCGAAGATCTGAGAGGTCGTTTGTGGGTAGGCCACAACAAG 473
|||| ||| |||| ||||||||||||||||||||||||||||||| | | |||| |
Sbjct 373 CGGGGAAATCTTCATGCTGCCGAAGATCTGAGAGGTCGTTTGTGGGTTGACAACAAGGAT 432
Query 474 GAAGACTACGTTGTTGTGTGGCATTTTGAAAT-GAACGACTTTCTAGGGTTTTGCAAGAA 532
||| ||||||||| ||| ||||| |||||||| | | | ||||||||| |||||| ||
Sbjct 433 GAAAACTACGTTGCTGTCTGGCAATTTGAAATGGGCCCA-TTTCTAGGG-TTTGCAGGAC 490
Query 533 AGGGGATGATCATTACCGCGAGA-TCTTAACA-AGGAC-CGATGTTC-GCAGGGAGTTAC 588
|||||||||| |||||||||||| || |||| | | | ||| |||| | ||||||||||
Sbjct 491 AGGGGATGATTATTACCGCGAGATTC-CAACACA-G-CTCGAGGTTCAG-AGGGAGTTAC 546
Query 589 -ACGGTGTAAAAGATATGGTACTTAAAGGTTACAGTCTTTACATCCTTGCCATCCGTGAC 647
| ||| || | |||||||||||||||||||||| ||||||| || |||||| ||||||
Sbjct 547 GA-GGTTTATACGATATGGTACTTAAAGGTTACAATCTTTACGTCTTTGCCACCCGTGAG 605
Query 648 TTCGTTCGACACTTGGATTTGTCTGGACATGGTGAAGATGGTATCAAGGATGTGTCCGAG 707
||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||
Sbjct 606 TTCATTCGACACTTGGATTTGTCTGGACAAGATGAAGATGGTTTCAAGGATGTGTCCGAG 665
Query 708 AACCATAAGCTTCCAATGTGGATGCCAAGTCTGAGTATGGATGAACAAGTAAG-AGTCAA 766
|| |||| ||||||||||||||||||| |||||| |||| | |||| | ||| || ||
Sbjct 666 AAACATAGGCTTCCAATGTGGATGCCACGTCTGACTATGAAGGAACGTGAAAGTAG-GAA 724
Query 767 -C-ATAGATAAGAT-CA-CCTCATCTAGTGAAA-GCATTGCTGTTACAAGATTAGGTCAG 821
| || | ||| | | || |||||| ||| ||||||||||||||||| ||||||
Sbjct 725 CCAATTG--AAG-TGTATCC-CATCTA-ACAAAGGCATTGCTGTTACAAGAGCAGGTCAA 779
Query 822 GTTTTGGTTGTCTATTC-TTACGAGTTAGGTAACTCTCAAAGGGATAGGATGTTCCACCT 880
|||||| |||||||| | || ||| ||||||| |||| |||| |||||||||||| |
Sbjct 780 GTTTTGCTTGTCTATACGTT-CGATTTAGGTACCTCTGAAAGTCATAGGATGTTCCGTTT 838
Query 881 GTACAAGAGAGATCCTAAAGATCTTGACCCGAATA-CCTACCTA-ACCCGGCTTCTTGAG 938
||||||||| ||||||||||||||||||||||| | ||| | | ||| |||||||||||
Sbjct 839 GTACAAGAGGGATCCTAAAGATCTTGACCCGAAAACCCT--CGACACCTGGCTTCTTGAG 896
Query 939 GTACATTCTCTAGGTGATGAGGCCCTCTTTCTTGATTTGGGAACCACCGTGCCTGCTGAC 998
|| |||||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct 897 GTGCATTCTCTAGGTGATGAGGCCCTCTTTCTTGATTTGGGTATTACTGTGCCTGCTGAC 956
Query 999 CATACCCGTGGTATTGAGCCTAACTCCATCTATTTCACCCGTGGTGATCGTATCCGTCAC 1058
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 957 CATACCCTTGGTATTGAGCCTAACTCCATTTATTTCACCCGTGGTGATCGTATCCGTCAC 1016
Query 1059 AG-GAATCCTTCACGCCCCGACATCTGTGTCTTCAATCTTACAACAAAGACCATCAAACA 1117
| ||||| | || ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1017 AAAGAATCGT-CATGCCTCGACATCTGTGTCTTCAATCTTATAACAAAGACCATCAAACG 1075
Query 1118 CCGCCACACTCTCTCCAACTTTAACGTCAAGGATGCTCAGTGGTTTCTTCCCTCTTGA 1175
| |||| ||||||||||| ||| || | |||||||||||||||||||| ||||||
Sbjct 1076 CTTCCACGGTCTCTCCAACTCCAACTTCTACGATGCTCAGTGGTTTCTTCCTTCTTGA 1133
> AT1G27540.1 | Symbols: | Protein of unknown function (DUF295)
| chr1:9566332-9567906 REVERSE LENGTH=1575
Length=1575
Score = 1027 bits (556), Expect = 0.0
Identities = 1001/1204 (83%), Gaps = 78/1204 (6%)
Strand=Plus/Plus
Query 34 CTACGCTCAAACG-ACGATTGAGT-TGTACAGATCTTGAGTCTGCAAAGGC-CATGCGTT 90
||||||||||||| || || |||| | | | ||| ||||| ||| ||| | | ||||||
Sbjct 158 CTACGCTCAAACGAAC-ATCGAGTAT-TCCTGATTTTGAGCCTGTTAAGTCTC-TGCGTT 214
Query 91 CGACTTTGATTCAGTGGCCAAGAGCCGGATCGCCATTGCTGATGCTG-TCTGCAGAAAAG 149
|||||||||||| | ||||| ||||||||| ||||||||||||||| | ||||||| ||
Sbjct 215 CGACTTTGATTCTGCAGCCAAAAGCCGGATCTCCATTGCTGATGCTGAT-TGCAGAAGAG 273
Query 150 GATGGTTGTCGTAGTAATAGTGTGTACAACCCAGCCGATGATAGGGTTGACGAGACGAAG 209
||||||||| | || | | |||||||||| |||| ||||||| ||||| |||||
Sbjct 274 TATGGTTGTC---G---TA-T-T-TACAACCCAGAAGATGGTAGGGTTTACGAGCCGAAG 324
Query 210 AGTGACCTTTCAGGGTATCGATTCCTTGGAAGCTCGGGTAAGTGGTTTCTCGTGGTAGAT 269
|||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||||
Sbjct 325 AGTGACTTTTCAGGGTATCGATTCCTGGGAAGCTCAGGTAAGTGGTTTCTGGTGGTAGAT 384
Query 270 TCTC-AATTGAAACTCTATATTATAGATGTCTTTAGCGAG-GGTAGGATCGATCTTCCAC 327
|||| || |||||||||||||||||||||| ||||||||| | ||||||||||||||||
Sbjct 385 TCTCGAA-TGAAACTCTATATTATAGATGTATTTAGCGAGAAG-AGGATCGATCTTCCAC 442
Query 328 CACTAGAATCATTGAAAGGTAGCC-TTTATAA-AATTGAGCGAGTAGGAGAGAATAAAGT 385
||||||||||||| || ||||||| ||| ||| | ||| ||| | ||||||| | || ||
Sbjct 443 CACTAGAATCATTTAAGGGTAGCCATTT-TAAGATTTG-GCGTGAAGGAGAGGAGAATGT 500
Query 386 C-AGGA-AT-AT-AT-TAT--TCAGTGATTTATCTCCTG-GGGA--TCCTCATACTGCCG 435
| || | || | || || | || ||| || | || | | ||||||| ||||||
Sbjct 501 CAAGCATATGGTAATGGATGATGAG-GATCCATTTTGTGATGAATTTCCTCATGCTGCCG 559
Query 436 AAGATCTGAGAGGTCGTTTGTGGGTAGGCCACAACAA-GGAAGACTACGTTGTTGTGTGG 494
||||||||||||||||||||||||| | | |||| || |||| |||||||||||||||||
Sbjct 560 AAGATCTGAGAGGTCGTTTGTGGGTTGACGACAAGAATGGAA-ACTACGTTGTTGTGTGG 618
Query 495 CATTTTGAAATG-AACGACTTTCTAGGGTTTTGCAAGAAAGGGGATGATCATTACCGCGA 553
|| ||||||||| | | | |||||||||||||||| || |||||||||||||||||||||
Sbjct 619 CAGTTTGAAATGTACCCA-TTTCTAGGGTTTTGCAGGACAGGGGATGATCATTACCGCGA 677
Query 554 GA-TCTTAACAAGGA-C-CGATGTTC-GCAGGGAGTTAC-ACGGTGTAAAAGATATGGTA 608
|| || ||| | || | ||| |||| | |||||||||| | ||| |||| |||||||||
Sbjct 678 GATTC-CAAC-A-GAGCTCGAGGTTCAG-AGGGAGTTACGA-GGTTTAAACGATATGGTA 732
Query 609 CTTAAAGGTTACAGTCTTTACATCCT-TGCCATCCGTGACTTCGTTCGACACTTGGATTT 667
|| |||||||||| ||||||| | || ||||| |||||| ||| |||||||||| |||||
Sbjct 733 CTGAAAGGTTACAATCTTTACGT-CTATGCCACCCGTGAGTTCATTCGACACTTAGATTT 791
Query 668 GTCTGGACATGGTGAAGATGGTATCAAGGATGTGTCCGAGAACCATAAGCTTCCAATGTG 727
||||||||| | |||||||||| |||||||||| |||||||| |||| ||||||||||||
Sbjct 792 GTCTGGACAAGATGAAGATGGTTTCAAGGATGTATCCGAGAAACATAGGCTTCCAATGTG 851
Query 728 GATGCCAAGTCTGAGTATGGATGAACAAGT-AAGAGTCAACATAG-ATAAGA--TC-A-C 781
|||||||||| ||| ||| | |||| || || || | | || | |||| || | |
Sbjct 852 GATGCCAAGTATGACAATGAAGGAAC--GTGAA-CGT-ATGA-AGCAAAAGAGGTCTATC 906
Query 782 CTCATCTAGTGAAA-GCATTGCTGTTACAAGATTAGGTCAGGTTTTGGTTGTCTATT-CT 839
| |||||| ||| ||||||||||||||||| |||||| ||||||||||||| || |
Sbjct 907 C-CATCTA-ACAAAGGCATTGCTGTTACAAGAGCAGGTCAAGTTTTGGTTGTCT-TTACG 963
Query 840 TACGAGTTAGGTAACTCTCAAAGGGATAGGATGTTCCACCTGTACAAGAGAGATCCTAAA 899
||||| ||||||| |||| |||| | ||||||||||| ||||||||||| |||||||||
Sbjct 964 TACGATTTAGGTACCTCTGAAAGTCACAGGATGTTCCATCTGTACAAGAGGGATCCTAAA 1023
Query 900 GATCTTGACCCGAATA-CCTACCTA-ACCCGGCTTCTTGAGGTACATTCTCTAGGTGATG 957
|||||||||||||| | ||| | | ||||||||||||||||||||||||||||||||||
Sbjct 1024 GATCTTGACCCGAAAACCCT--CGACACCCGGCTTCTTGAGGTACATTCTCTAGGTGATG 1081
Query 958 AGGCCCTCTTTCT-TGATTTGGGAACCACCGTGCCTGCTGACCATACCCGTGGTATTGAG 1016
|||||||||| || ||||||||| | |||||||||||||||||||||| ||| ||||||
Sbjct 1082 AGGCCCTCTT-CTATGATTTGGGTATTACCGTGCCTGCTGACCATACCCTTGGAATTGAG 1140
Query 1017 CCTAACTCCATCTATTTCACCCGTGGTGATCGTATCCGTCACAGGAA-TCCTTCACGCCC 1075
||||||||||| |||||||| |||| |||||||||| |||||| || | | || |||
Sbjct 1141 CCTAACTCCATTTATTTCACTCGTGATGATCGTATCTGTCACAATAAATTGT-CATGCCT 1199
Query 1076 CGACATCTGTGTCTTCAATCTTACAACAAAGACCATCAAACACCGCCACACTCTCTCCAA 1135
||||||| |||||||||||||| ||||||||||| |||||| | |||| |||||||||
Sbjct 1200 CGACATCGGTGTCTTCAATCTTGCAACAAAGACCGTCAAACGCTTCCACGGTCTCTCCAA 1259
Query 1136 CTTTAACGTCAAGGATGCTCAGTGGTTTCTTCCCTCTTGATTCTTGCCTTCCTC-ATGGT 1194
||| ||| |||| |||||||||||||||||||| |||||||||| |||||| || |||||
Sbjct 1260 CTTCAACTTCAACGATGCTCAGTGGTTTCTTCCTTCTTGATTCTAGCCTTC-TCCATGGT 1318
Query 1195 TTCT 1198
||||
Sbjct 1319 TTCT 1322
> AT1G27580.1 | Symbols: | Protein of unknown function (DUF295)
| chr1:9589933-9591075 REVERSE LENGTH=1095
Length=1095
Score = 774 bits (419), Expect = 0.0
Identities = 760/916 (83%), Gaps = 57/916 (6%)
Strand=Plus/Plus
Query 293 AGATGTCTTTAGCGAG-GGTAGGATCGATCTTCCACCACTAGAATCATTGAAAGGTAGCC 351
|||||| ||||||||| | ||||||||||||||||||||||||||||| || |||||||
Sbjct 204 AGATGTATTTAGCGAGAAG-AGGATCGATCTTCCACCACTAGAATCATTTAAGGGTAGCC 262
Query 352 -TTTATAA-AATTGAGCGAGTAGGAGAGAATAAAGTC-AGGA-AT-AT-AT-TAT--TCA 402
||| ||| | ||| ||| | ||||||| | || ||| || | || | || || | |
Sbjct 263 ATTT-TAAGATTTG-GCGTGAAGGAGAGGAGAATGTCAAGCATATGCTAATGGATGATGA 320
Query 403 GTGATTTATCTCCTG-GGGA--TCCTCATACTGCCGAAGATCTGAGAGGTCGTTTGTGGG 459
| ||| || || || | | ||||||| ||||||||||||||||||||||||||||||
Sbjct 321 G-GATCCATTTCGTGATGAATTTCCTCATGCTGCCGAAGATCTGAGAGGTCGTTTGTGGG 379
Query 460 TAGGCCACAACAA-GGAAGACTACGTTGTTGTGTGGCATTTTGAAATG-AACGACTTTCT 517
| | | |||| || |||| ||||||||||||||||||| ||||||||| | | | |||||
Sbjct 380 TTGACGACAAGAATGGAA-ACTACGTTGTTGTGTGGCAGTTTGAAATGTACCCA-TTTCT 437
Query 518 AGGGTTTTGCAAGAAAGGGGATGATCATTACCGCGAGA-TCTTAACAAGGA-C-CGATGT 574
||||||||||| || ||||||||||||||||||||||| || ||| | || | ||| ||
Sbjct 438 AGGGTTTTGCAGGACAGGGGATGATCATTACCGCGAGATTC-CAAC-A-GAGCTCGAGGT 494
Query 575 TC-GCAGGGAGTTAC-ACGGTGTAAAAGATATGGTACTTAAAGGTTACAGTCTTTACATC 632
|| | |||||||||| | ||| |||| ||||||||||| |||||||||| ||||||| |
Sbjct 495 TCAG-AGGGAGTTACGA-GGTTTAAACGATATGGTACTGAAAGGTTACAATCTTTACGT- 551
Query 633 CT-TGCCATCCGTGACTTCGTTCGACACTTGGATTTGTCTGGACATGGTGAAGATGGTAT 691
|| ||||| |||||| ||| |||||||||| |||||||||||||| | |||||||||| |
Sbjct 552 CTATGCCACCCGTGAGTTCATTCGACACTTAGATTTGTCTGGACAAGATGAAGATGGTTT 611
Query 692 CAAGGATGTGTCCGAGAACCATAAGCTTCCAATGTGGATGCCAAGTCTGAGTATGGATGA 751
||||||||| |||||||| |||| |||||||||||||||||||||| ||| ||| | ||
Sbjct 612 CAAGGATGTATCCGAGAAACATAGGCTTCCAATGTGGATGCCAAGTATGACAATGAAGGA 671
Query 752 ACAAGT-AAGAGTCAACATAG-ATAAGA--TC-A-CCTCATCTAGTGAAA-GCATTGCTG 804
|| || || || | | || | |||| || | || |||||| ||| |||||||||
Sbjct 672 AC--GTGAA-CGT-ATGA-AGCAAAAGAGGTCTATCC-CATCTA-ACAAAGGCATTGCTG 724
Query 805 TTACAAGATTAGGTCAGGTTTTGGTTGTCTATT-CTTACGAGTTAGGTAACTCTCAAAGG 863
|||||||| |||||| ||||||||||||| || | ||||| ||||||| |||| ||||
Sbjct 725 TTACAAGAGCAGGTCAAGTTTTGGTTGTCT-TTACGTACGATTTAGGTACCTCTGAAAGT 783
Query 864 GATAGGATGTTCCACCTGTACAAGAGAGATCCTAAAGATCTTGACCCGAATA-CCTACCT 922
| ||||||||||| ||||||||||| ||||||||||||||||||||||| | ||| |
Sbjct 784 CACAGGATGTTCCATCTGTACAAGAGGGATCCTAAAGATCTTGACCCGAAAACCCT--CG 841
Query 923 A-ACCCGGCTTCTTGAGGTACATTCTCTAGGTGATGAGGCCCTCTTTCT-TGATTTGGGA 980
| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 842 ACACCCGGCTTCTTGAGGTACATTCTCTAGGTGATGAGGCCCTCTT-CTATGATTTGGGT 900
Query 981 ACCACCGTGCCTGCTGACCATACCCGTGGTATTGAGCCTAACTCCATCTATTTCACCCGT 1040
| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||
Sbjct 901 ATTACCGTGCCTGCTGACCATACCCTTGGAATTGAGCCTAACTCCATTTATTTCACTCGT 960
Query 1041 GGTGATCGTATCCGTCACAGGAA-TCCTTCACGCCCCGACATCTGTGTCTTCAATCTTAC 1099
| |||||||||| |||||| || | | || ||| ||||||| |||||||||||||| |
Sbjct 961 GATGATCGTATCTGTCACAATAAATTGT-CATGCCTCGACATCGGTGTCTTCAATCTTGC 1019
Query 1100 AACAAAGACCATCAAACACCGCCACACTCTCTCCAACTTTAACGTCAAGGATGCTCAGTG 1159
|||||||||| |||||| | |||| |||||||||||| ||| |||| |||||||||||
Sbjct 1020 AACAAAGACCGTCAAACGCTTCCACGGTCTCTCCAACTTCAACTTCAACGATGCTCAGTG 1079
Query 1160 GTTTCTTCCCTCTTGA 1175
||||||||| ||||||
Sbjct 1080 GTTTCTTCCTTCTTGA 1095
Score = 237 bits (128), Expect = 2e-61
Identities = 163/180 (91%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 66 CTTGAGTCTGCAAAGGC-CATGCGTTCGACTTTGATTCAGTGGCCAAGAGCCGGATCGCC 124
||||| ||||| ||||| | ||||||||| |||||||||| |||||| |||| |||| ||
Sbjct 25 CTTGACTCTGCTAAGGCTC-TGCGTTCGAATTTGATTCAGCGGCCAAAAGCCAGATCTCC 83
Query 125 ATTGCTGATGCTGTCTGCAGAAAAGGATGGTTGTCGTAGTAATAGTGTGTACAACCCAGC 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 84 ATTGCTGATGCTTTCTGCAGAAAAGGATGGTTGTCGTAGTAATAGTGTGTACAACCCATA 143
Query 185 CGATGATAGGGTTGACGAGACGAAGAGTGACCTTTCAGGGTATCGATTCCTTGGAAGCTC 244
| ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| |||
Sbjct 144 CAATGATAGGGTTTACGAGACGAAGAGTGACTTTTCAGGGTATCGATTCCTGGGAAACTC 203
> AT1G27550.1 | Symbols: | F-box family protein | chr1:9568813-9569330
REVERSE LENGTH=378
Length=378
Score = 316 bits (171), Expect = 2e-85
Identities = 203/218 (93%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 295 ATGTCTTTAGCGAGG-GTAGGATCGATCTTCCACCACTAGAATCATTGAAAGGTAGCCTT 353
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 ATGTCTTTAGCGAGGAG-AGGATCGATCTTCCACCACTAGAATCATTGAAAGGTAGCCTT 204
Query 354 TATAAA-ATTGAGCGAGTAGGAGAGAATAAAGTCAGGAATATATTATTCAGTGATTTATC 412
| |||| |||||||||||||||||| ||||||||||| |||||||| |||| ||||||||
Sbjct 205 T-TAAAGATTGAGCGAGTAGGAGAGGATAAAGTCAGGGATATATTAATCAGCGATTTATC 263
Query 413 TCCTGGGGATCCTCATACTGCCGAAGATCTGAGAGGTCGTTTGTGGGTAGGCCACAACAA 472
| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| |||| ||
Sbjct 264 GCGTGGGGCTCCTCATACTGCCGAGGATCTGAGAGGCCGTTTGTGGGTAGGCGACAAGAA 323
Query 473 GGAAGACTACGTTGTTGTGTGGCATTTTGAAATGAACG 510
||||||||||||||||||||||||||||||||||||||
Sbjct 324 GGAAGACTACGTTGTTGTGTGGCATTTTGAAATGAACG 361
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58835038740
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5