BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921865 Length=1015 Score E Sequences producing significant alignments: (Bits) Value AT1G28170.1 | Symbols: SOT7 | sulphotransferase 7 | chr1:984133... 1009 0.0 > AT1G28170.1 | Symbols: SOT7 | sulphotransferase 7 | chr1:9841332-9842312 FORWARD LENGTH=981 Length=981 Score = 1009 bits (546), Expect = 0.0 Identities = 849/993 (85%), Gaps = 30/993 (3%) Strand=Plus/Plus Query 21 ATGGATGAGAAGGAGATCCCAAAGAACCTGGAGAGAGACGACGAAGAATACGTAAGTTTG 80 |||||||||| ||||||||||||| ||| | || || ||||||||| || |||||||| Sbjct 1 ATGGATGAGACCAAGATCCCAAAGAAACTGCAAAGCGATGACGAAGAAAACATAAGTTTG 60 Query 81 ATCTCTTCACTT-CCTTCAGATATAGATTTCGTTGGC-CGAGAGCTGTTCAAGTACCAAG 138 || ||||||||| |||| || ||||||||| || ||| |||| ||||| ||||||| Sbjct 61 ATTTCTTCACTTCCCTT-TGACGTAGATTTCGACAGCACGA-AGCTCTTCAAATACCAAG 118 Query 139 AATCTTGGTACGGCAACAAAATGT-TGCAAGCAATAATCAATTTCCAACGAGGTTTCGAG 197 || |||||||| | |||||| | |||||| | | ||||||| ||| ||||||||||| Sbjct 119 GATGTTGGTACGACGACAAAA-CTCTGCAAGGAGTCCTCAATTTTCAAAGAGGTTTCGAG 177 Query 198 CCACAAGACACGGACATAATCATTGCTTCGTTCCCCAAAGCCGGCACTACTTGGCTCAAA 257 ||||||||||| || ||||| |||||||||||||||||| | |||||||||||||||||| Sbjct 178 CCACAAGACACCGATATAATTATTGCTTCGTTCCCCAAATCTGGCACTACTTGGCTCAAA 237 Query 258 GCTCTCACTGTAGCCCTCCTTGAGAGAT-C---C--AAACACTCTTCTGATGCTCATCCT 311 |||||||| ||||| ||||| ||||||| | | |||||||||||||||| ||||||| Sbjct 238 GCTCTCACGGTAGCTCTCCTCGAGAGATCCAAACAGAAACACTCTTCTGATGATCATCCT 297 Query 312 CTTCGACTTGATAATCCTCAT-AACCTAGTACCATTCTTCGAGCTCGA-TCTGTACGCCA 369 |||| |||||||||||||||| | || ||||||||| |||||||| | |||| | | Sbjct 298 CTTCTACTTGATAATCCTCATGGA-CTGGTACCATTCCTCGAGCTC-AGGCTGTTCACTG 355 Query 370 AAAGCTCGAAACCAGATATGACCAATTTCTCATCAACCCCGAGGGTATTCGCGACTCATG 429 | | ||||||||||||| |||||| | ||||||| | |||||| |||| ||||||||| Sbjct 356 AGACCTCGAAACCAGATCTGACCAGTATCTCATCGTCGCCGAGGTTATTTTCGACTCATG 415 Query 430 TGCCGCTCCACACGCTGCAAGAAGCTCTCAAGAACTCTTCTTGTAAGATTGTGTACGTGT 489 || || |||| ||||||| ||| |||||||| |||||| |||||||||| || ||||||| Sbjct 416 TGGCGTTCCAAACGCTGCGAGAGGCTCTCAAAAACTCTCCTTGTAAGATCGTTTACGTGT 475 Query 490 GGAGGAACGTGAAAGATGTTTTGGTGTC-TTATTGGTATTTC-A-AGTCTGCACTGA-TG 545 |||||||||||||||| || ||||||| || |||||||||| | || | ||| | | Sbjct 476 GGAGGAACGTGAAAGACGTACTGGTGTCGTT-TTGGTATTTCAACAG-C-GCA-AAACTA 531 Query 546 AAGGTAGAAGCA-GAGAGAAGC-TTGTTGGAGTCAATGTTCGAATCGTTTTGCAGAGGAG 603 ||| |||||| | ||||||||| || ||||| ||||||||||| || ||||||||||||| Sbjct 532 AAGATAGAAG-AGGAGAGAAGCATT-TTGGATTCAATGTTCGAGTCCTTTTGCAGAGGAG 589 Query 604 TTAGCTATGGCGGACCATTCTGGGAACATGTCTTGAGCTATTGGAGAGGAAGCTTGGAAG 663 ||| | || |||||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 590 TTATCAATTACGGACCATCCTGGGAACATGTCTTGAACTATTGGAGAGCAAGCTTGGAAG 649 Query 664 AATCCCAGAATGTGCTTTTCTTGAAGTACGAGGATTTGAAAACAGAACCTCGTGTGCAGC 723 | ||| |||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct 650 ACTCCAAGAATGTGCTTTTCTTGAAGTACGAGGAGTTAAAAACAGAACCTCGCGTGCAGC 709 Query 724 TTAAGAGACTTGCCGAGTTTTTGGATTGTCCTTTTACGGTGGAAGAAGAAGAGAGCGGAT 783 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 710 TGAAGAGACTTGCCGAGTTCTTGGATTGTCCTTTTACGGTGGAAGAAGAAGAGAGGGGAT 769 Query 784 CTGTGGAAGAGATCTTGGAACTTTGTTCATTGCGTAACTTGAAGAATTTGGAGATCAACA 843 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 770 CAGTGGAAGAGATCTTGGACCTTTGCTCATTGCGTAACTTGAAGAATTTGGAGATCAACA 829 Query 844 AAATCGGGATAACG-TCAAGAGGAGTCGATCACAAGAATTTTTTCCGTAAAGGGGAAGTC 902 | | ||| | |||| | | | || | ||||||||||| |||||| ||||||||||||||| Sbjct 830 AGACCGGAAAAACGCTTAGGGGG-GCCGATCACAAGATTTTTTTTCGTAAAGGGGAAGTC 888 Query 903 GGTGACTCGAAGAATTATCTGACTCCTGAAATGGAGAAGAGGATTGACATGATCACCGAG 962 ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| Sbjct 889 GGTGACTCGAAGAATCATCTGACTCCTGAAATGGAGAAGATAATTGACATGATCACTGAG 948 Query 963 GATAAATTTGGAGGTTCGGGTTTGAAATTATGA 995 || ||||||| |||||||| ||||||||| ||| Sbjct 949 GAGAAATTTGAAGGTTCGGATTTGAAATTCTGA 981 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49731805530 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5