BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921873 Length=1112 Score E Sequences producing significant alignments: (Bits) Value AT1G28230.1 | Symbols: PUP1, ATPUP1 | purine permease 1 | chr1:... 1631 0.0 > AT1G28230.1 | Symbols: PUP1, ATPUP1 | purine permease 1 | chr1:9862073-9864606 REVERSE LENGTH=1250 Length=1250 Score = 1631 bits (883), Expect = 0.0 Identities = 1024/1093 (94%), Gaps = 6/1093 (1%) Strand=Plus/Plus Query 3 AGCTAGCAATAAGAAGAAGATGAAGAATGGTCTGATAATCATAAACTGTATAATCCTCAG 62 ||| |||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct 34 AGCAAGCAGCAAGAAGAAGATGAAGAATGGTTTGATAATCATAAACTGTATTATCCTCAC 93 Query 63 TATAGGAACATGTGGAGGTCCTTTGTTAACTCGTCTCTACTTCACCAATGGCGGAAAACG 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 TATAGGAACATGTGGAGGTCCTTTGTTAACTCGTCTCTACTTCACCAATGGCGGAAAACG 153 Query 123 AATCTGGTTCATGAGCTTCCTA-CAAACCGCTGGTTGTCCAATCATCCTCATCCCTCTCT 181 |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| Sbjct 154 AATCTGGTTCATGAGCTTCCTATCAA-CCGCTGGTTTTCCAATCATCCTCATCCCTCTCT 212 Query 182 TGGTCTCCTTTCTGAGACGTCGGCGCAGCAACCGCAACAGC-AACAACGCAGAAAACAAG 240 |||||||||| || || ||||| ||||||||||||||| | |||||||| ||||||||| Sbjct 213 TGGTCTCCTTCCTCAGCCGTCGCCGCAGCAACCGCAACC-CTAACAACGCGGAAAACAAG 271 Query 241 GCG-AAAACAAAGCTTTTCCTCATGGAAACTCCTCTGTTCATCGCCTCCATCGTCATCGG 299 || ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| || Sbjct 272 -CGGAAAACAAAGCTCTTCCTCATGGAAACTCCTCTGTTTATCGCCTCCATTGTCATAGG 330 Query 300 ATTGCTCACAGGACTTGACAACTACTTATACTCTTACGGATTAGCGTATCTGCCAGTTTC 359 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 331 GTTGCTCACAGGACTTGACAACTACTTATATTCTTACGGATTAGCATATCTGCCAGTTTC 390 Query 360 AACTTCATCTCTCATAATAGGAACTCAACTAGCTTTCAATGCTCTCTTCGCTTTCTTGTT 419 ||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 391 AACTTCATCGCTCATAATCGGAACTCAACTAGCTTTCAACGCTCTCTTCGCTTTCTTGTT 450 Query 420 GGTCAAGCAAAAGTTCACTCCTTTCTCCATAAACGCCGTCGCTTTGTTGACGGTTGGTAC 479 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 451 AGTCAAGCAAAAGTTCACTCCGTTCTCCATAAACGCCGTCGTTTTGTTGACGGTTGGTAT 510 Query 480 CGGGATCCTTGCTTTACACAGCGATGGAGACAAGCCGGCTAACGAGAGCCATAAACAGTA 539 |||||||||||| |||||||| ||||||||||| |||||||| |||||| | ||| |||| Sbjct 511 CGGGATCCTTGCGTTACACAGTGATGGAGACAAACCGGCTAAGGAGAGCAAGAAAGAGTA 570 Query 540 TCTGATTGGGTTCTTGATGACTGTGGTTGCAGCTGTTCTCTATGCTTTTATATTGCCGCT 599 | || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 571 TGTGGTTGGGTTCTTGATGACTGTGGTTGCAGCTCTTCTCTATGCTTTTATATTACCGCT 630 Query 600 CGTTGAGCTCACTTACAAGAAAGCTCGACAAGAAATCACTTTCCCACTTGTGCTCGAGAT 659 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 631 CGTTGAGCTAACTTACAAGAAAGCTCGTCAAGAAATCACTTTCCCACTTGTGCTTGAGAT 690 Query 660 TCAGATGGTCATGTGCGTTGCTGCTACTTTGTTCTGTCTCGTTGGGATGTTCATCGTTGG 719 |||||||||||||||| ||||||||||||| |||||| || |||| |||||||||||||| Sbjct 691 TCAGATGGTCATGTGCCTTGCTGCTACTTTTTTCTGTGTCATTGGCATGTTCATCGTTGG 750 Query 720 AGATTTCAAGGTGATAGAAAAAGAAGCAAGAGAGTTCAAGATTGTAGGATCAGTGTTTTA 779 |||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||| Sbjct 751 AGATTTTAAGGTGATAGCAAGAGAAGCAAGAGAGTTCAAGATTGGAGGATCAGTGTTTTA 810 Query 780 CTATGCATTGATAGTGATCACAGGAATAGTATGGCAAGGTTTCTTCTTAGGAGCCATAGG 839 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 811 CTATGCATTGATAGTGATCACAGGAATAATATGGCAAGGTTTCTTCTTAGGAGCCATAGG 870 Query 840 GATTGTGTTTTGTGCATCATCACTAGCTTCTGGTGTTCTCATCAGTGTTCTGCTTCCGGT 899 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 871 GATTGTGTTTTGTGCATCATCACTAGCTTCTGGTGTTCTGATAAGTGTTCTGCTTCCGGT 930 Query 900 GACTGAAGTTTTGGCCGTCGTTTGTTTCCGGGAGAAGTTTCAGGCAGAGAAAGGTGTCTC 959 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 931 GACTGAAGTTTTCGCCGTCGTTTGTTTCCGGGAGAAGTTTCAGGCAGAGAAAGGTGTCTC 990 Query 960 TCTACTTCTATCTCTCTGGGGCTTCGTCTCTTACTTCTACGGCGAGATTAAATCCGGCAA 1019 ||||||||| ||||| ||||| || ||||||||||||||||||||| ||||||||||||| Sbjct 991 TCTACTTCTTTCTCTTTGGGGATTTGTCTCTTACTTCTACGGCGAGTTTAAATCCGGCAA 1050 Query 1020 GAAAGTTCTTGATAAACCTCAGCCGCCGGAGACAGAACTGCCTATTCTTCCAGTTAGTGA 1079 ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1051 GAAAGTTGTTGATAAACCTCAACCGCCGGAGACAGAACTGCCTATTCTTCCTGTTAGTGA 1110 Query 1080 TTCTGTTGCTTAA 1092 || |||||||||| Sbjct 1111 TTATGTTGCTTAA 1123 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54517791870 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5