BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921948 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT1G29160.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 760 0.0 AT2G34140.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 335 3e-91 > AT1G29160.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:10183797-10184324 REVERSE LENGTH=528 Length=528 Score = 760 bits (411), Expect = 0.0 Identities = 491/529 (93%), Gaps = 8/529 (2%) Strand=Plus/Plus Query 28 ATGGCGACCCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACCATAACATTCAACGCC 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCGACCCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACCATAACATTCAACGCC 60 Query 88 AACACCACACAGACAGTTAAAAAA-GAAGAGCAGCAACAACAACA---GCCAGAGCTACA 143 |||| ||||||||| | ||||||| |||||||||||||||||||| |||||||||||| Sbjct 61 AACATCACACAGAC-GATAAAAAAAGAAGAGCAGCAACAACAACAACAGCCAGAGCTACA 119 Query 144 AGCAACAACACCCGTTAGATCATCATCGTCGGATCTGACGGCTGAGAAGCGTCCAGACAA 203 |||||||||| ||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct 120 AGCAACAACAGCCGTTAGATCACCCTCATCGGATCTGACGGCTGAGAAGCGTCCAGACAA 179 Query 204 GATCATCCCATGTCCGAGATGCAAGTCCATGGAGACTAAGTTCTGTTACTTCAATAACTA 263 |||||| |||||||||||||||||| ||||||||||||||| ||||||||||| ||||| Sbjct 180 GATCATACCATGTCCGAGATGCAAGAGCATGGAGACTAAGTTTTGTTACTTCAACAACTA 239 Query 264 CAACGTTAATCAACCACGACACTTCTGCAAAGGTTGTCAGCGTTACTGGACCGCCGGTGG 323 |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct 240 CAACGTTAATCAACCAAGACACTTCTGCAAAGGTTGTCAACGTTACTGGACCGCCGGTGG 299 Query 324 AGCTCTCCGGAATGTTCCCGTCGGTGCCGGTCGTCGAAAGTCCAAACCTCCGGGACGTGT 383 |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct 300 AGCTCTCCGGAATGTTCCCGTCGGTGCCGGTCGTCGGAAGTCAAAACCTCCCGGACGTGT 359 Query 384 CGGTGGGTTTGCCGAGTTGCTTGGAGCTGCGACTGGAGCCGTTGATCAAGTGGAGCTGGA 443 ||||||||| || |||||||||||||||||||||||||| |||||||| || ||||| || Sbjct 360 CGGTGGGTTCGCTGAGTTGCTTGGAGCTGCGACTGGAGCTGTTGATCAGGTCGAGCTAGA 419 Query 444 CGCTTTGCTAGTGGAAGAGTGGCGAGCCGCCACG---TCACACGGTGGTTTTCGGCATGA 500 ||||||||||||||||||||| |||| || ||| || ||||||||||| |||||||| Sbjct 420 TGCTTTGCTAGTGGAAGAGTGGAGAGCTGCTACGGCGTCTCACGGTGGTTTCCGGCATGA 479 Query 501 TTTTCCGGTGAAGAGACTTCGTTGTTACACCGATGGTCAATCTTGTTAA 549 ||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 480 TTTTCCGGTGAAGAGGCTCCGTTGTTACACCGATGGTCAATCTTGTTAA 528 > AT2G34140.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr2:14413758-14414765 REVERSE LENGTH=1008 Length=1008 Score = 335 bits (181), Expect = 3e-91 Identities = 435/550 (79%), Gaps = 47/550 (9%) Strand=Plus/Plus Query 23 TTTTAATGGCGACCCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACCATAACATTCA 82 |||| |||||||| ||||||||||||||||||||||||||||||||||| || |||| | Sbjct 61 TTTTCATGGCGACTCAAGATTCTCAAGGGATTAAACTCTTTGGCAAAACTATTGCATTTA 120 Query 83 ACGCCAACACCACACAGACAGTTAAAAAA-GAAGA-GCAGCAACAACAACAGCCAGAGCT 140 || | | | | ||| | | |||||| ||||| | || | || || | ||| |||| Sbjct 121 AC---A-CTCGA-ACA-A---T-AAAAAATGAAGAAG-AG-A-CA-CACCCGCCGGAGCA 166 Query 141 ACAAGCAACAACACCCGTTAGATCATCATCGTC---GGATCTGACGGCTGAGAAGCGTCC 197 | |||| |||| | |||||||||||||||| || |||||||||||| ||||||||||| Sbjct 167 AGAAGCCACAATAGCCGTTAGATCATCATCATCATCGGATCTGACGGCCGAGAAGCGTCC 226 Query 198 AGACAAGATCATCCCATGTCCGAGATGCAAGTCCATGGAGACTAAGTTCTGTTACTTCAA 257 || |||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||| Sbjct 227 GGATAAGATCATAGCATGTCCAAGATGCAAGAGCATGGAGACAAAGTTCTGTTACTTCAA 286 Query 258 TAACTACAACGTTAATCAACCACGACACTTCTGCAAAGGTTGTCAGCGTTACTGGACCGC 317 ||||||||||||||||| || |||||||| || ||||| || || |||||||||||||| Sbjct 287 CAACTACAACGTTAATCAGCCTCGACACTTTTGTAAAGGCTGCCACCGTTACTGGACCGC 346 Query 318 CGGTGGAGCTCTCCGGAATGTTCCCGTCGGTGCCGGTCGTCGAAAGTCCAAACCTCCGGG 377 |||||| || |||||||| ||||||||||| ||||||||||| ||||||||||| || || Sbjct 347 CGGTGGTGCACTCCGGAACGTTCCCGTCGGCGCCGGTCGTCGGAAGTCCAAACCACCTGG 406 Query 378 ACGTGTCGGTGGGTTTGCCGAGTTGCTTGGAGCTGCGAC-TGGAGCCGTT-GATCAAGTG 435 ||||||| ||| || | | | |||||||| || || ||| | || | ||||| Sbjct 407 TCGTGTCG-TGG-TTGGT--A-T-GCTTGGAGATG-GAAATGGTG---TTCGC-CAAGTC 455 Query 436 GAGCTGG-AC--G-CTTTGCTAGTGGAAGAGTGGC-G-A-GCCGCCA-C-GTCA-C--AC 483 ||||| | | ||| ||| || || ||||||| | | ||||| | | | || | || Sbjct 456 GAGCTTATAAATGGCTT-GCTCGTTGAGGAGTGGCAGCATGCCGC-AGCCG-CAGCTCAC 512 Query 484 GGTGGTTTTCGGCATGATTTTCCGGTGAAGAGACTTCGTTGTTACACCGATGGTCAATCT 543 ||| |||| |||||||||||||| ||||| | || || |||||| |||| |||||||| Sbjct 513 GGTAGTTTCCGGCATGATTTTCCCATGAAGCGGCTCCGGTGTTACTCCGACGGTCAATCG 572 Query 544 TGTTAATTAT 553 || | ||||| Sbjct 573 TGCTGATTAT 582 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5