BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg921962 Length=346 Score E Sequences producing significant alignments: (Bits) Value AT5G35760.1 | Symbols: | Beta-galactosidase related protein | ... 132 3e-30 AT1G47770.1 | Symbols: | Beta-galactosidase related protein | ... 108 4e-23 > AT5G35760.1 | Symbols: | Beta-galactosidase related protein | chr5:13934108-13934782 FORWARD LENGTH=534 Length=534 Score = 132 bits (71), Expect = 3e-30 Identities = 116/137 (85%), Gaps = 6/137 (4%) Strand=Plus/Plus Query 88 CCGTGGAGCA-TTTTCTCAAAAGCTCGTTTGCGTTATTCGCGCGAGCCGTCTATGACCAT 146 |||||||||| ||| ||||| |||| | ||| || || || |||||| |||||||| Sbjct 197 CCGTGGAGCACCTTT-TCAAAGGCTCATATGCATTGTTTGCAATAGCCGTTTATGACCA- 254 Query 147 C-CGTTGGTCGAGGATTTCGCGAAGCCCGTCTTCATGGTCGAATCCGCTAT-GTCCTCAA 204 | |||||||||||||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 255 CACGTTGGTCGAGGATTTCGCGAAGCCCGTCTTCATGGTCGAATCCGCCAAAG-CCTCAA 313 Query 205 AAGATTCTTCAAACCTT 221 ||||| |||||||||| Sbjct 314 CAGATTTTTCAAACCTT 330 > AT1G47770.1 | Symbols: | Beta-galactosidase related protein | chr1:17590266-17591261 FORWARD LENGTH=618 Length=618 Score = 108 bits (58), Expect = 4e-23 Identities = 82/93 (88%), Gaps = 4/93 (4%) Strand=Plus/Plus Query 131 AGCCGTCTATGACCATC-CGTTGGTCGAGGATTTCGCGAAGCCCGTCTTCATGGTCGAAT 189 ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct 513 AGCCGTCTATGACCA-CACGTTGGTCGAGGATTTCGCGAAGCCCGTCAACATGGTCGAAT 571 Query 190 CCG-CTATGTCCTCAAAAGATTCTTCAAACCTT 221 ||| | | | | |||| ||||| |||||||||| Sbjct 572 CCGTCAAGG-CTTCAACAGATTTTTCAAACCTT 603 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16186215178 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5