BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922025
Length=833
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1290 0.0
AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 907 0.0
AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 379 2e-104
> AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:10445625-10447553 REVERSE LENGTH=1033
Length=1033
Score = 1290 bits (698), Expect = 0.0
Identities = 785/827 (95%), Gaps = 6/827 (1%)
Strand=Plus/Plus
Query 1 ACAAAGCTAACAAGCTGAGAATGGATTCATCTCAAGGAATTTCAGCTGGTACACAACAAA 60
||||| | |||||||||||||||||||| ||||| |||||||||||| ||||||||| |
Sbjct 112 ACAAATCAAACAAGCTGAGAATGGATTCGTCTCAGGGAATTTCAGCTACTACACAACAGA 171
Query 61 AGATAGTGATTCCT-AACAGCAACAATGAGAAGCTTGTGGGTCTGCTTCATGAAACTGGT 119
||||||||||| || || |||||||| |||||||| ||||||||||||||||||||||||
Sbjct 172 AGATAGTGATT-CTGAATAGCAACAACGAGAAGCTAGTGGGTCTGCTTCATGAAACTGGT 230
Query 120 TCCACAGAAATTGTTGTCTTGTGCCATGGCTTTCGATCAACCAAGAATGACCTGGTCATG 179
|| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 231 TCAACAGAAATTGTGGTCTTGTGCCATGGCTTTCGATCAACCAAGAATGACCAAGTCATG 290
Query 180 AAAAATGTTGCTGCTGCTATAGAGAAAGAAGGGATCAGTGCTTTCCGTTTTGATTTCTCT 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 291 AAAAATGTTGCTGCTGCTATAGAGAAAGAAGGGATCAGCGCTTTCCGTTTTGATTTCTCT 350
Query 240 GGGAATGGAGAGAGTGAAGGCAATTTCTATTTTGGTAACTACAACTATGAAGCTGATGAT 299
||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 351 GGGAACGGAGAGAGTAAAGGCAGTTTCTATTTTGGTAACTACAACTATGAAGCTGATGAT 410
Query 300 CTACATTCTGTTATCCGATACTTTACTAACATGAACCGTGTGGTTCCTATAATTATCGGC 359
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 411 CTACATTCTGTTATCCGATACTTCACTAACATGAACCGTGTGGTTCCTATAATTATTGGC 470
Query 360 CACAGTAAAGGAGGTGATGTGGTCCTCGTCTATGCCTCGAAATATCACGATATCCGCAAT 419
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 471 CACAGTAAAGGTGGTGATGTGGTCCTCGTCTATGCCTCGAAGTATCAAGATATTCGCAAT 530
Query 420 GTAATCAATCTCTCGGGACGTTATGATCTGAAGGA-AGGCATAGGACAGCGTCTTGGGGA 478
|||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||
Sbjct 531 GTAATCAATCTCTCGGGACGTTATGATCTGAA-GAGAGGCATAGGAGAGCGTCTTGGGGA 589
Query 479 AGATTTTTTGGAACGAATAAAGCAACAAGGATTCATCGATATTAAAGAAGGAAACTCTGG 538
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 590 AGATTATTTGGAAAGAATAAAGCAACAAGGATTCATCGATATTAAAGAAGGAAACGCTGG 649
Query 539 GTTTCGTGTTACCGAGGAGAGCTTAATGGAAAGGTTAAACACTGATATGCATGAAGCTTG 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 GTTTCGTGTTACCGAGGAGAGCTTAATGGAAAGGTTAAACACTGATATGCATGAAGCTTG 709
Query 599 CCTCAAAATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGATCGGCTGACGAGGTAAT 658
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 710 CCTCAAGATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGCTCGGCTGACGAGGTAAT 769
Query 659 ACCCCTGGGAGATGCCAAGGAGTTTGCAAAGATCATACCGAACCATAAACTGGAGATTGT 718
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 770 ACCCCTGGAAGATGCCAAGGAGTTTGCAAAGATCATACCGAACCACAAGCTGGAGATTGT 829
Query 719 GGAAGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAGTTACAACA-GTTATGG 777
||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||
Sbjct 830 GGAAGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAATTACAA-ATGTTATGG 888
Query 778 AGTTCATAAAGACAGTCATTGTGAAGAATAACTAGtttttttttttt 824
|||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 889 AGTTCATAAAGACAGTCATTGTGAAGAACAACTAGTTTTTTTTGTTT 935
> AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17535759-17537530 REVERSE LENGTH=1319
Length=1319
Score = 907 bits (491), Expect = 0.0
Identities = 672/761 (88%), Gaps = 6/761 (1%)
Strand=Plus/Plus
Query 55 AACAAAAGATAGTGATTCCTAACAGCA-ACAATGAGAAGCTTGTGGGTCTGCTTCATGAA 113
|||| | ||| |||||||| ||||| | |||| |||||||| || |||||||||||||||
Sbjct 188 AACAGAGGATTGTGATTCCAAACAG-ACACAACGAGAAGCTGGTTGGTCTGCTTCATGAA 246
Query 114 ACTGGTTCCACAGAAATTGTTGTCTTGTGCCATGGCTTTCGATCAACCAAGAATGACCTG 173
|||||||| ||||| || || ||||||||||||||||||||||||| ||||| | |||
Sbjct 247 ACTGGTTCTACAGACATCGTAGTCTTGTGCCATGGCTTTCGATCAAACAAGAGTAACCAA 306
Query 174 GTCATGAAAAATGTTGCTGCTGCTATAGAGAAAGAAGGGATCAGTGCTTTCCGTTTTGAT 233
| ||||| ||||| |||||||||||| |||||||||||||||| ||||| |||||||||
Sbjct 307 ATAATGAATAATGTGGCTGCTGCTATACAGAAAGAAGGGATCAGCGCTTTTCGTTTTGAT 366
Query 234 TTCTCTGGGAATGGAGAGAGTGAAGGCAATTTCTATTTTGGTAACTACAACTATGAAGCT 293
||||| |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||
Sbjct 367 TTCTCCGGGAATGGAGAGAGTGAAGGCAGTTTCTATTATGGTAACTATAACCATGAAGCT 426
Query 294 GATGATCTACATTCTGTTATCCGATACTT-TACTAACATGAACCGTGTGGTTCCTATAAT 352
|||||| ||||||||||| ||| |||||| | |||||| |||||||||||||||||||||
Sbjct 427 GATGATTTACATTCTGTTGTCCAATACTTCT-CTAACAAGAACCGTGTGGTTCCTATAAT 485
Query 353 TATCGGCCACAGTAAAGGAGGTGATGTGGTCCTCGTCTATGCCTCGAAATATCACGATAT 412
|||| |||||||| ||||||||||| |||||| |||| ||||| || ||||| ||| |
Sbjct 486 CCTCGGTCACAGTAAGGGAGGTGATGTTGTCCTCCTCTACGCCTCCAAGTATCATGATGT 545
Query 413 CCGCAATGTAATCAATCTCTCGGGACGTTATGATCTGAAGGAA-GGCATAGGACAGCGTC 471
|||||||||||||||||||||||||||||||||||| || || || ||| || ||||||
Sbjct 546 CCGCAATGTAATCAATCTCTCGGGACGTTATGATCTTAA-AAAGGGTATAAGAGAGCGTC 604
Query 472 TTGGGGAAGATTTTTTGGAACGAATAAAGCAACAAGGATTCATCGATATTAAAGAAGGAA 531
|||| ||||||||||||||| |||| ||||||||||||||||||||| || ||| ||||
Sbjct 605 TTGGAGAAGATTTTTTGGAAAGAATTAAGCAACAAGGATTCATCGATGTTGGAGATGGAA 664
Query 532 ACTCTGGGTTTCGTGTTACCGAGGAGAGCTTAATGGAAAGGTTAAACACTGATATGCATG 591
| || |||| ||||||||| ||| ||||||||||||| ||||||| ||||||||| ||||
Sbjct 665 AATCGGGGTATCGTGTTACTGAGAAGAGCTTAATGGACAGGTTAAGCACTGATATTCATG 724
Query 592 AAGCTTGCCTCAAAATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGATCGGCTGACG 651
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 725 AAGCTTGCCTCAAGATTGACAAAGAGTGCAGGGTCTTGACGGTTCATGGATCGGAGGACG 784
Query 652 AGGTAATACCCCTGGGAGATGCCAAGGAGTTTGCAAAGATCATACCGAACCATAAACTGG 711
|||||||||| ||| |||||| ||||||||||| ||||||||||| ||||| || ||||
Sbjct 785 AGGTAATACCTGTGGAAGATGCGAAGGAGTTTGCGAAGATCATACCAAACCACAAGCTGG 844
Query 712 AGATTGTGGAAGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAGTTACAACAG 771
||||||||||||||||| ||||| ||||||| | || ||||||||||||||| ||||||
Sbjct 845 AGATTGTGGAAGGAGCTAATCATGGTTATACTGAGCACCAAAGTCAATTAGTTTCAACAG 904
Query 772 TTATGGAGTTCATAAAGACAGTCATTGTGAAGAATAACTAG 812
|||||||||||||||||||||||||||||||||| ||||||
Sbjct 905 TTATGGAGTTCATAAAGACAGTCATTGTGAAGAACAACTAG 945
> AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17525486-17526978 REVERSE LENGTH=1047
Length=1047
Score = 379 bits (205), Expect = 2e-104
Identities = 256/281 (91%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 247 GAGAGAGTGAAGGCAATTTCTATTTTGGTAACTACAACTATGAAGCTGATGATCTACATT 306
||||||||||||||| |||||||| |||||||||||| || |||||||||||||||||||
Sbjct 300 GAGAGAGTGAAGGCAGTTTCTATTATGGTAACTACAATTACGAAGCTGATGATCTACATT 359
Query 307 CTGTTATCCGATACTT-TACTAACATGAACCGTGTGGTTCCTATAATTATCGGCCACAGT 365
||||||||| |||||| | ||||| |||||||||| ||| |||||||| |||| ||||||
Sbjct 360 CTGTTATCCAATACTTCT-CTAACTTGAACCGTGTTGTTACTATAATTCTCGGTCACAGT 418
Query 366 AAAGGAGGTGATGTGGTCCTCGTCTATGCCTCGAAATATCACGATATCCGCAATGTAATC 425
||||||||||||||||||||| |||||||||| || ||||||||||||| |||||| |||
Sbjct 419 AAAGGAGGTGATGTGGTCCTCCTCTATGCCTCCAAGTATCACGATATCCCCAATGTGATC 478
Query 426 AATCTCTCGGGACGTTATGATCTGAAGGAAGGCATAGGACAGCGTCTTGGGGAAGATTTT 485
||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||
Sbjct 479 AATCTCTCGGGACGTTATGATCTGAAGAAAGGCATAGGAGAACGTCTTGGTGAAGATTTT 538
Query 486 TTGGAACGAATAAAGCAACAAGGATTCATCGATATTAAAGA 526
|||||| |||| ||||||||||||| ||||||| |||||||
Sbjct 539 TTGGAAAGAATTAAGCAACAAGGATACATCGATGTTAAAGA 579
Score = 326 bits (176), Expect = 3e-88
Identities = 246/280 (88%), Gaps = 4/280 (1%)
Strand=Plus/Plus
Query 527 AGGAAACTCTGGGTT-TCGTGTTACCGAGGAGAGCTTAATGGAAAGGTTAAACACTGATA 585
|||| | ||| |||| ||||||||||||||||| || ||||| |||||||||| ||||
Sbjct 658 AGGAGATTCT-GGTTACCGTGTTACCGAGGAGAGTTTGATGGACCGGTTAAACACAGATA 716
Query 586 TGCATGAAGCTTGCCTCAAAATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGATCGG 645
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 717 TGCATGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGTCTTGACGGTCCATGGATCGG 776
Query 646 CTGACGAGGTAATACCCCTGGGAGATGCCAAGGAGTTTGCAAAGATCATACCGAACCATA 705
||||||| | |||| ||| |||||| ||||||||||||||||| |||||||||||
Sbjct 777 GTGACGAGACAGTACCAGTGGAAGATGCAAAGGAGTTTGCAAAGATAATACCGAACCACG 836
Query 706 AACTGGAGATTGTGGAAGGAGCTGATCATTGTTATACCAAACATCAAAGTCAATTAGTTA 765
| || |||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 837 AGCTACAGATTGTGGAAGGAGCTGATCATTGTTATACCAATTATCAAAGTCAATTGGTTT 896
Query 766 CAACAGTTATGGAGTTCATAAAGACAGTCATTGTGAAGAA 805
||| ||||||||||||||||||| ||||||||||||||
Sbjct 897 TAACGGTTATGGAGTTCATAAAGA--GTCATTGTGAAGAA 934
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40589190776
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5