BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg922041

Length=1639
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G21960.2 | Symbols:  | Receptor-like protein kinase-related ...   104    3e-21


> AT3G21960.2 | Symbols:  | Receptor-like protein kinase-related 
family protein | chr3:7737156-7739542 FORWARD LENGTH=1326
Length=1326

 Score =  104 bits (56),  Expect = 3e-21
 Identities = 82/95 (86%), Gaps = 0/95 (0%)
 Strand=Plus/Plus

Query  851  GACAAAGCAAGTGCTAATCACCAACCTTATGGCTATTATTCATGAGACTAGAAGTTTGAG  910
            ||| |||| | ||| ||| | |||| |||||| ||||||||| || || |||||||||||
Sbjct  807  GACCAAGCGATTGCAAATTAACAACTTTATGGGTATTATTCAAGAAACAAGAAGTTTGAG  866

Query  911  GAAGAACGGCATTATGATCCCGTCTCTAAGGAGCG  945
            |||||||||||||||||||||||| | ||||||||
Sbjct  867  GAAGAACGGCATTATGATCCCGTCCCCAAGGAGCG  901



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 80973479085


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5