BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922129
Length=1297
Score E
Sequences producing significant alignments: (Bits) Value
AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossma... 2082 0.0
AT2G34850.1 | Symbols: MEE25 | NAD(P)-binding Rossmann-fold sup... 996 0.0
> AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossmann-fold
superfamily protein | chr1:10854549-10858244 FORWARD
LENGTH=1925
Length=1925
Score = 2082 bits (1127), Expect = 0.0
Identities = 1240/1294 (96%), Gaps = 9/1294 (1%)
Strand=Plus/Plus
Query 4 AGCTGAAGTAAATCAAAATGTTTAATTTTGGTCGAGCAAGAAGCCAAGGGAGGCAAAACA 63
||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 375 AGCTGAAGTGAATCAAAATGTTTAGTTTTGGCCGAGCAAGAAGCCAAGGGAGGCAAAACA 434
Query 64 GATCTATGTCTCTTGGAGGACTAGATTATGCAGACCCGAAGAAGAAAAACAATTACTTGG 123
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 435 GATCTATGTCTCTTGGAGGACTGGATTATGCAGACCCCAAGAAGAAAAACAATTACTTGG 494
Query 124 GAAAGATTCTTTTGACAGCTTCTCTTACAGCCTTGTGCATTTTCATGCTAAAGCAATCTC 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 495 GAAAGATTCTTTTGACAGCTTCTCTTACAGCCTTGTGCATTTTCATGCTCAAGCAATCTC 554
Query 184 CAACTTTCAATACTCCGAGCGTGTTTTCTCGACATGAGCCAGGGGTTACACATGTTTTAG 243
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 555 CAACATTCAATACTCCTAGCGTGTTTTCTCGACATGAGCCAGGGGTTACACATGTTTTGG 614
Query 244 TCACTGGTGGTGCTGGTTATATTGGTTCACATGCAGCTCTAAGGCTTTTAAAGGAATCAT 303
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 615 TCACTGGTGGTGCTGGGTATATTGGTTCACATGCAGCTCTAAGGCTTCTAAAGGAATCAT 674
Query 304 ACCGAGTTACCATCGTGGACAATCTATCACGTGGG-AATCTTGGC-GCAGTCAAGATTTT 361
| ||||| ||||| ||||||||||||||||| ||| |||| | || ||||||| ||||||
Sbjct 675 ATCGAGTAACCATTGTGGACAATCTATCACG-GGGCAATC-TCGCTGCAGTCAGGATTTT 732
Query 362 GCAAGAACTGTTTCCTGAACCTGGAAGGCTTCAATTTATTTATGCTGATCTTGGAGATG- 420
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 GCAAGAACTATTTCCGGAACCTGGAAGGCTTCAATTTATTTATGCTGATCTTGGAGATGC 792
Query 421 CAAAGGCTGTCAACAAGATATTCACAGAGAACGCCTTTGACGCTGTAATGCATTTCGCCG 480
|||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
Sbjct 793 CAAA-GCTGTCAACAAGATATTCACAGAGAATGCCTTTGACGCTGTGATGCATTTCGCTG 851
Query 481 CTGTTGCATATGTTGGGGAAAGCACACAATTCCCTCTTAAGTATTATCACAATATTACAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 CTGTTGCATATGTTGGGGAAAGCACACAATTCCCTCTTAAGTATTATCACAATATTACAT 911
Query 541 CGAACACTTTGGTCGTATTAGAGACAATGGCCGCTCATGGAGTAAAGACTTTGATATATT 600
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 912 CGAACACTTTGGTAGTATTAGAGACAATGGCTGCTCATGGAGTAAAGACTTTGATATATT 971
Query 601 CAAGCACTTGTGCAACGTATGGGGAGCCTGATACTATGCCAATTACAGAGGAAACTCCTC 660
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 972 CAAGCACTTGTGCAACGTATGGGGAGCCTGATATTATGCCAATTACAGAGGAAACTCCTC 1031
Query 661 AGGTGCCAATCAATCCATATGGTAAGGCCAAGAAGATGGCAGAAGATATCATTTTGGATT 720
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 AGGTGCCAATCAACCCATATGGTAAGGCCAAGAAGATGGCAGAAGATATCATTTTGGATT 1091
Query 721 TCTCGAAAAACTCAAATATGGCAGTTATGATCCTAAGATATTTCAATGTGATTGGGTCCG 780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1092 TCTCGAAAAACTCAGATATGGCAGTTATGATCCTAAGATATTTCAATGTGATTGGGTCCG 1151
Query 781 ATCCAGAGGGCAGATTGGGTGAAGCCCCAAGGCCTGAACTGCGTGAGCATGGACGCATCT 840
||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 1152 ATCCAGAGGGCAGATTGGGTGAAGCCCCAAGACCTGAGCTGCGAGAGCATGGACGCATCT 1211
Query 841 CCGGTGCTTGCTTTGATGCAGCACGTGGCATCATGCCTGGCCTACAGATCAAAGGAACAG 900
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1212 CCGGTGCTTGTTTTGATGCAGCACGTGGCATCATGCCTGGCCTACAGATCAAAGGAACAG 1271
Query 901 ACTACAAAACCGCTGATGGAACTTGCGTACGTGATTACATTGATGTCACTGACTTGGTTG 960
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1272 ACTACAAAACCGCTGATGGAACTTGCGTACGGGATTACATTGATGTCACTGATTTGGTTG 1331
Query 961 ATGCTCATGTTAAAGCTCTTCAGAAGGCAAAACCCCGTAAAGTTGGAATCTACAATGTTG 1020
|||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 1332 ATGCTCATGTTAAAGCTCTTCAAAAGGCAAAACCACGCAAAGTTGGAATCTACAATGTTG 1391
Query 1021 GCACCGGGAAAGGTAGCTCGGTGAAAGAGTTTGTTGAGGCGTGCAAGAAAGCAACTGGTG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 GCACCGGGAAAGGTAGCTCGGTGAAAGAGTTTGTTGAGGCGTGCAAGAAAGCAACTGGTG 1451
Query 1081 TTGAGATCAAGATCGAATACTTGCCTAGGCGTGCAGGTGATTACGCTGAGGTTTACAGTG 1140
|||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 1452 TTGAGATCAAGATCGACTATTTGCCTAGACGTGCAGGTGATTACGCTGAGGTTTACAGTG 1511
Query 1141 ACCCGAGCAAGATCAGGAAGGAACTTAATTGGACAGCTAAGCACACTAATCTCAAAGAGA 1200
| || |||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1512 ATCCAAGCAAGATTAGGAAGGAACTTAACTGGACAGCTAAGCACACTAATCTCAAAGAGA 1571
Query 1201 GTCTTGAGACTGCATGGAGATGGCAGAAGCTGCACCGTAATGGCTACGGGTTAAC--C-T 1257
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| | |
Sbjct 1572 GTCTTGAGACTGCATGGAGATGGCAGAAGCTGCACCGTAATGGCTATGGCTTAACAACCT 1631
Query 1258 CATCGGTCTGGGTTTACTGACTTTGTTCATTCCT 1291
||||||||| ||||||||||||||||||||||||
Sbjct 1632 CATCGGTCTCGGTTTACTGACTTTGTTCATTCCT 1665
> AT2G34850.1 | Symbols: MEE25 | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:14704632-14706191 REVERSE LENGTH=1114
Length=1114
Score = 996 bits (539), Expect = 0.0
Identities = 803/931 (86%), Gaps = 15/931 (2%)
Strand=Plus/Plus
Query 323 CAATCTATCACGTGGGAATCTTGGCGCAGTCAAGATTTTGCAAGAACTGTTTCCTGAACC 382
||||||||| || ||||| || || ||||||||||| |||||| |||||||||| |||||
Sbjct 1 CAATCTATCTCGAGGGAACCTCGGTGCAGTCAAGATCTTGCAACAACTGTTTCCGGAACC 60
Query 383 TGGAAGGCTTCAATTTATTTATGCTGATCTTGGAGATGCAAAGGCTGTCAACAAGATATT 442
||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 61 TGGAAAGCTTCAATTCATTTATGCTGATCTTGGAGATGCAAATGCTGTTAACAAAATATT 120
Query 443 CACAGAGAACGCCTTTGACGCTGTAATGCATTTCGCCGCTGTTGCATATGTTGGGGAAAG 502
| || ||||| ||||||||||| |||||||| || |||||||| |||||||| |||||
Sbjct 121 TTCTGAAAACGCATTTGACGCTGTGATGCATTTTGCTGCTGTTGCTTATGTTGGAGAAAG 180
Query 503 CACACAATTCCCTCTTAAGTATTATCACAATATTACATCGAACACTTTGGTCGTATTAGA 562
|||||| || ||||| || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 181 CACACAGTTTCCTCTCAA-TATTATCACAATATCACATCGAACACATTGGTAGTTTTAGA 239
Query 563 GACAATGGCCGCTCATGGAGTAAAGACTTTGATATATTCAAGCACTTGTGCAACGTATGG 622
||||||||| |||||||| || ||||||||||||||||||||||| ||||| || |||||
Sbjct 240 GACAATGGCTGCTCATGGTGTGAAGACTTTGATATATTCAAGCACATGTGCTACTTATGG 299
Query 623 GGAGCCTGATACTATGCCAATTACAGAGGAAACTCCTCAGGTGCCAATCAATCCATATGG 682
|||||||| | |||||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 300 AGAGCCTGAGAAAATGCCAATAACAGAGGAAACTCCACAGGTTCCAATCAATCCATATGG 359
Query 683 TAAGGCCAAGAAGATGGCAGAAGATATCATTTTGGATTTCTCGAAAAACTCAAATATGGC 742
||||| || |||||||||||||||||||| ||||||||||| || || || | ||||||
Sbjct 360 AAAGGCTAAAAAGATGGCAGAAGATATCATCTTGGATTTCTCCAAGAATTCTATTATGGC 419
Query 743 AGTTATGATCCTAAGATATTTCAATGTGATTGGGTCCGATCCAGAGGGCAGATTGGGTGA 802
|||||||||||||||||||||||||||||||||||| ||||| ||||| ||| | |||||
Sbjct 420 AGTTATGATCCTAAGATATTTCAATGTGATTGGGTCTGATCCTGAGGGTAGACTAGGTGA 479
Query 803 AGCCCCAAGGCCTGAACTGC-GTGAGCATGGACGCATCTCCGGTGCTTGCTTTGATGCAG 861
||| ||||| |||||||| | ||||||||||||| ||||| ||||||||||||||||| |
Sbjct 480 AGCTCCAAGACCTGAACT-CAGTGAGCATGGACGGATCTCTGGTGCTTGCTTTGATGCTG 538
Query 862 CACGTGGCATCATGCCTGGCCTACAGATCAAAGGAACAGACTACAAAACCGCTGATGGAA 921
|||| |||||||| || || || ||||| ||||||||||||||||| || | |||||| |
Sbjct 539 CACGAGGCATCATTCCCGGGCTGCAGATTAAAGGAACAGACTACAAGACTGTTGATGGGA 598
Query 922 CTTGCGTACGTGATTACATTGATGTCACTGACTTGGTTGATGCTCATGTTAAAGCTCTTC 981
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 599 CTTGTGTACGTGATTACATTGATGTCACCGACTTGGTTGATGCTCATGTTAAAGCTCTTG 658
Query 982 AGAAGGCAAAACCCCGTAAAGTTGGAATCTACAATGTTGGCACCGGGAAAGGTAGCTCGG 1041
| ||||| |||||||| |||||||| |||| ||||||||| |||||||||||||||||||
Sbjct 659 AAAAGGCGAAACCCCGCAAAGTTGGTATCTTCAATGTTGGTACCGGGAAAGGTAGCTCGG 718
Query 1042 TGAAAGAGTTTGTTGAGGCGTGCAAGAAAG-CAACTGGTGTTGAGATCAA-GATCGAATA 1099
|||| |||||||| || |||||||| |||| | || || ||||| || || | |||| ||
Sbjct 719 TGAAGGAGTTTGTGGAAGCGTGCAA-AAAGGCGACCGGCGTTGATATAAAAG-TCGATTA 776
Query 1100 CTTGCCTAGGCGTGCAGGTGATTACGCTGAGGTTTACAGTGACCCGAGCAAGATCAG-GA 1158
|||| || || ||||| |||||||| ||||||||||| || || || || |||| ||
Sbjct 777 CTTGGAAAGACGGGCAGGAGATTACGCAGAGGTTTACAGCGATCCAAGAAAAATCAAAGA 836
Query 1159 AGGAACTTAATTGGACAGCTAAGCACACTAATCT-CAAAGAGAGTCTTGA-GACTG-CAT 1215
|| | || |||||||||||||||||||| ||||| ||| || ||| || | || || |||
Sbjct 837 AG-AGCTGAATTGGACAGCTAAGCACACCAATCTTCAA-GAAAGT-TTAAAGA-TGGCAT 892
Query 1216 GGAGATGGCAGAAGCTGCACCGTAATGGCTA 1246
|||||||||| ||||| || || | ||||||
Sbjct 893 GGAGATGGCAAAAGCTTCATCGCAGTGGCTA 923
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63804892695
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5