BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922179 Length=2001 Score E Sequences producing significant alignments: (Bits) Value AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-1101... 824 0.0 AT1G30935.1 | Symbols: | pseudogene, F-box protein family, con... 494 2e-138 AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 198 2e-49 AT3G56890.1 | Symbols: | F-box associated ubiquitination effec... 139 9e-32 AT1G47350.1 | Symbols: | F-box associated ubiquitination effec... 137 3e-31 AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 111 2e-23 AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 106 9e-22 AT1G30921.1 | Symbols: | pseudogene, hypothetical protein | ch... 102 1e-20 AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 95.3 2e-18 AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 86.1 1e-15 AT1G31090.1 | Symbols: | F-box family protein | chr1:11094407-... 78.7 2e-13 AT1G33010.1 | Symbols: | F-box and associated interaction doma... 62.1 2e-08 > AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-11011792 REVERSE LENGTH=1125 Length=1125 Score = 824 bits (446), Expect = 0.0 Identities = 553/605 (91%), Gaps = 6/605 (1%) Strand=Plus/Plus Query 306 ATGGCTTATCCATCTGGTCCTGATGATCATAAAATTCTGACCTTGGGAACTCGAAAAATG 365 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 1 ATGGCTTATCCATCTGGTCCTGATGATCATAAAATTCTGACCTTGGGAACTAGAAGAATG 60 Query 366 AGGTGGAGGAAA-ATCCATTGTCCCTTAACTCATGATCCTTTTTGTGGAGGGATATGCAT 424 |||||||| ||| |||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 61 AGGTGGAG-AAAGATCCATTGCCCCTTAACTCATGATCCTTTTTGTGAAGGGATATGCAT 119 Query 425 CAATGGGGTTTTTTATTACTTAGCTATCAAAAGTGATGAAACCTTGGTTAAT-AGAAGAT 483 |||||||||||| ||||||||||||||| ||| ||||||| |||||||||| | ||| | Sbjct 120 CAATGGGGTTTTATATTACTTAGCTATCCAAATTGATGAACCCTTGGTTAACCA-AAGGT 178 Query 484 CTTATGTCATAGTTTGCTTTGATGTTAGATTTGAGAAATTCAAGTTCATCGACGTAGAAT 543 ||| ||| |||||||||||||||||||||||||| ||||||| |||||| |||||||| | Sbjct 179 CTTTTGTGATAGTTTGCTTTGATGTTAGATTTGAAAAATTCACGTTCATTGACGTAGATT 238 Query 544 GCTTTTATCATTTAATAAATTATAAGGGAAAATTAGGCGGGATTAATTGGAATTATGCTA 603 ||||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||| || Sbjct 239 GCTTTTATCATTTGATAAATTATAAGGGAAAATTAGGTGGGATTGATTGGAAACATGGTA 298 Query 604 GCGCTGATGGAAGTCGTACCTTTGAGTTGAGAATGTGGGTTCTAGATGATGCCGAGAAAC 663 |||| ||||||||||||||||||||||||| ||||||||||| || |||| |||||||| Sbjct 299 ACGCTAATGGAAGTCGTACCTTTGAGTTGAGTATGTGGGTTCTTGAGGATGTCGAGAAAC 358 Query 664 ATGAATGGTCGATATATGACTACACTTTTCCCGAACATGAAGTCTTTTTCTACAATATTG 723 |||||||||||| ||| |||| |||||||| || |||||||| | |||||||||||| Sbjct 359 ATGAATGGTCGAAATACGACTGCACTTTTCTTGAGTATGAAGTCATGTTCTACAATATT- 417 Query 724 T-TCTTGCCGTTGGGATGGCTGCTACATGTGAAATTGTTTTGTCGGAGAAGTTTACATCG 782 | |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 418 TCTCTTGCCGTTGGGATGACTGCTACATGTGAAATTGTTTTGTCGGAGAAGTTTGCATCT 477 Query 783 AAACCGTTTTATGTCTTCTACTTCAATCCAGAAAGAGACACTCTCCAAAGAGTTGAAATC 842 ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 478 AAATCGTTTTATGTCTTCTACTTCAATCCCGAAAGAGAAACTCTCCAAAGAGTTGAAATC 537 Query 843 CAAGGATTGGAGAATCACTGTAGAGTTTACACTATTGCAGACCATGTAGAGGATCTTAAT 902 ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct 538 CAAGGATTGGAGAATCATTGTAGAGTTTACACTATTACAGACCATGTCGAGGATCTTAAT 597 Query 903 GTTAA 907 ||||| Sbjct 598 GTTAA 602 > AT1G30935.1 | Symbols: | pseudogene, F-box protein family, contains F-box domain Pfam:PF00646 | chr1:11017436-11018990 REVERSE LENGTH=1555 Length=1555 Score = 494 bits (267), Expect = 2e-138 Identities = 683/874 (78%), Gaps = 68/874 (8%) Strand=Plus/Plus Query 1007 CTATGCCTCTGGTTTGATCTATTTTCATAATATGTGCATCCCAAGGGAGGATGAGGATAC 1066 ||||||||||||||||||||||||| | || |||| |||||||| ||| ||||||||| | Sbjct 309 CTATGCCTCTGGTTTGATCTATTTTTAAAAAATGTTCATCCCAAAGGAAGATGAGGATGC 368 Query 1067 AAAGCGTGTGATATGTAACCCTAC-CACCGGACAGTATGTGATCTTACCTGAACTGAGAA 1125 |||||||||| | ||| ||||| | ||| || ||||||||||||||||||||||| || Sbjct 369 AAAGCGTGTGTTGTGTGACCCT-CTCACTGGCCAGTATGTGATCTTACCTGAACTTAG-- 425 Query 1126 AGCACTTCATGTCGTACAGCTATTTAGGGTTTGATCCAATAGACAAGGAATTCAAGGTAT 1185 || | | | ||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct 426 AGTAGGTGGT-TCGTATAGCTATTTAGGGTTTGATCCGATTGATAAGGAATTCAAGGTAT 484 Query 1186 TGCTCATGAACACTAGTGGTTATATAGCTTATAATGAT-ACAGATCATCATATTTTGACA 1244 || ||||| | ||| ||| || |||||||| || ||| | ||||||| ||||||||||| Sbjct 485 TGTTCATGGATACTTGTGATTTTATAGCTTCGAAGGATGA-AGATCATTATATTTTGACA 543 Query 1245 TTAGGAACTGGAAAAATGAGGTGGAGAAAGATTCAGTGTCCTTTTAAC-CATGAGCCTTT 1303 || ||||||||| || ||| |||||| ||||| || ||||||||| || ||||||||||| Sbjct 544 TTGGGAACTGGAGAATTGAAGTGGAGGAAGATCCAATGTCCTTTT-ACACATGAGCCTTT 602 Query 1304 TTGGGAAAGGATATGCATCAATGGGGTTTTGTATTACAAAGC-T-C-A-CCAG-TT-TGA 1357 |||||| ||||||||||| |||||||||||||||||| || | | | | | || | | Sbjct 603 TTGGGAGAGGATATGCATTAATGGGGTTTTGTATTACTCTGCTTACTATTCTGATTCTAA 662 Query 1358 TGGAAGGTCTTATGTAATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCAAGTTCATTGA 1417 |||||||||| || | |||| |||||||||||||||||||||||||||||| ||||| | Sbjct 663 TGGAAGGTCTCATCTCATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAATTTCATAGC 722 Query 1418 GGCAACATTTTGTAATATGTTTACTCAATTGATAAACTATAAGGGTAAATTAGGTGTGG- 1476 ||| | | | || | | ||| ||||||||||||||||| |||||| ||| || Sbjct 723 CACAAAACATCGG--TACG---A-TCAGTTGATAAACTATAAGGGGAAATTATGTG-GGA 775 Query 1477 TTAATTTGAAGAATGTTGATGATGGTACAAGTTT-TAGGCATACCCT-TGA-GTTTCGTA 1533 |||||||| || ||| | | | | || ||| | || || ||| | | ||| ||| Sbjct 776 TTAATTTGGAGTATGCT-A-G--G---CATGTTGGT-GG-ATTTCCTGTTAAGTTGAGTA 826 Query 1534 TGTGGGTTCTGGAGCATGTTGAGAAAATGGAATGGTCGGAATATGTCTACACTTTGTTGG 1593 |||||||| | ||| |||| |||||| |||||||||| || |||||||| |||||| || Sbjct 827 TGTGGGTTTTAGAGGATGTCGAGAAACCGGAATGGTCGAAACATGTCTACTCTTTGT-GG 885 Query 1594 ATAGTA-A-TGAAG-CAGCTGATGATCTTGTTGTTGA-TCTTGT-TGTTGTC-GGGATGA 1647 | | | | ||||| | | | | | | | | || |||| | |||| || ||||||| Sbjct 886 ACGG-AGAGTGAAGTC-GTTAAGG-T-TAACCG--GAATCTT-TCTGTT-TCTGGGATGA 937 Query 1648 CTGCTACTGGTGATATTATTTTGTCGAAG-ATAGATACATGTGAA-CCGATTTATGtttt 1705 |||| || ||||| ||| |||| |||| | | |||| || | || ||| |||||||||| Sbjct 938 CTGCAACCGGTGACATTGTTTTATCGATGGA-AGATGCAACT-AATCCGTTTTATGTTTT 995 Query 1706 tttCTTCAATCCCGAAAGGAAAACT-T-----TCCAAAGTGTTGAAATCCAAGGTTTTGG 1759 ||||||||| || ||||| ||| | ||||||||||||||||||||||| |||| Sbjct 996 CAACTTCAATCCGGATAGGAACACTCTCCAAGTCCAAAGTGTTGAAATCCAAGGTCTTGG 1055 Query 1760 AGCTAATCGTGATTGCAGAGTTTACC---CCTTTGTAGACTATGTAGATGATCTTAGC-T 1815 ||||||||||||| || || || || ||||||| ||||||||||| ||| |||| | Sbjct 1056 AGCTAATCGTGATCACATAGCTTGCCATGCCTTTGTTGACTATGTAGAAGATTTTAGTGT 1115 Query 1816 TAAACCATGCAAAGC---AACTCAAGTCAAGCCC 1846 || | ||||| || |||||||||||||||| Sbjct 1116 TAG-CGATGCAGTGCTGCAACTCAAGTCAAGCCC 1148 > AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899 FORWARD LENGTH=1068 Length=1068 Score = 198 bits (107), Expect = 2e-49 Identities = 460/617 (75%), Gaps = 77/617 (12%) Strand=Plus/Plus Query 1231 ATCATATTTTGACATTAGGAACTGGAAAA-ATGAGGTGGAGAAAGATTCA-GTGT-CCTT 1287 |||||||| |||||||||||||| ||||| |||||||||| ||||| | ||| |||| Sbjct 317 ATCATATTCTGACATTAGGAACT-GAAAATGTGAGGTGGAGGGAGATT-ATATGTCCCTT 374 Query 1288 TTAACCATGAGCCTTTTTGGG-AAAG--GATATGCATCAATGGGGTTTTGTATTACA-AA 1343 || | |||| ||| | ||| |||| ||||||||||||||||||||||||||||| || Sbjct 375 TTCA-TATGATCCTCCTCGGGAAAAGCCGATATGCATCAATGGGGTTTTGTATTACATAA 433 Query 1344 GC-TCACCAGTTTGATGGAAGGTCTTATGTAATAGTTTGCTTTGATGTTAGGTCTGAGAA 1402 | || |||| || | || | || ||| |||||||||||||||||||||||| Sbjct 434 GTGTCGGTAGTT--ATT-AT--TCAC-T-TA-TAGGTTGCTTTGATGTTAGGTCTGAGAA 485 Query 1403 ATTCAAGTTC--AT-TG-AGGCA-ACATT--TTGT--AATA-TGTT-TACTCAATTGATA 1451 ||||||||| || | | || | ||| || | || | || | || |||||||| Sbjct 486 ATTCAAGTTTTTATATCTAAGCCCAGATTGCTT-TCCAA-ACTGGTCTAGAAAATTGATA 543 Query 1452 AACTATAAGGGTAAATTAGGTGTGG-T-TAATTTGAAGAATGTTGATGATGGTACAAGTT 1509 |||||||||||||||||||||||| | |||| ||||| | | || ||||| | || Sbjct 544 AACTATAAGGGTAAATTAGGTGTGACTATAATG-GAAGA-T-T--ATCATGGTGGA--TT 596 Query 1510 TTAGGCATACCCTTGAGTTTCGTATGTGGGTTCTGGAGCATGTTGAGAAA-ATGGAATGG 1568 | | ||||| |||| |||||||||||||| ||| |||| |||||| | ||||||| Sbjct 597 T----C---CCCTTAAGTTGCGTATGTGGGTTCTAGAGGATGTCGAGAAAGA-GGAATGG 648 Query 1569 TCG-GAATATGTCTACACTTTGTTGGA-T-AGTAATGAAG-C-AGCTGA-TGATCTTGTT 1622 || || |||| |||||||||| || | || ||| ||| | || | ||| || | Sbjct 649 ACGAGA-TATGCCTACACTTTGA-GGCCTGAG-AATAAAGTCGAGGACAATGA-CTA-T- 702 Query 1623 GTTGATCTTGTTGTTGTCGGG-ATGACTGCTACTGGTGATATTATTTTGTCGAAGATAGA 1681 || || | ||||||| ||| | |||||| | ||||| ||| ||||| |||| | ||| Sbjct 703 GT--ATAT-GTTGTTG--GGGCA--ACTGCTTCAGGTGAAATTGTTTTGACGAA-ACAGA 754 Query 1682 -TACATGTGAACCGATTTATGtttttttCTTCAATCCCGAAAGGAAAACTTTCCAAAGTG 1740 | ||| | ||||| |||||||||| | ||| | ||| |||||||| ||| ||| ||| | Sbjct 755 ATGCATATAAACCGTTTTATGTTTTCTACTTTAGTCCTGAAAGGAACACTCTCCTAAGCG 814 Query 1741 TTGAAATCCAAGGTTTTGGAGCT-AATCGTGAT-TGCAGA--GTTTACCCCTTTGTAGAC 1796 |||||||||||||| |||||| ||| || | | || | |||||| |||||||||| Sbjct 815 TTGAAATCCAAGGTGTTGGAGAAGAATGGTTTTAT-CATAATGTTTACTACTTTGTAGAC 873 Query 1797 TATGTAGATGATCTTAG 1813 |||| || |||||||| Sbjct 874 CATGTCGAGGATCTTAG 890 > AT3G56890.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:21062990-21063717 REVERSE LENGTH=660 Length=660 Score = 139 bits (75), Expect = 9e-32 Identities = 314/420 (75%), Gaps = 54/420 (13%) Strand=Plus/Plus Query 1452 AACTATAAGGGTAAATTAGGTGTGGTTAATTTG-AAGAATGTTGATGATGGTACAAGTTT 1510 ||||||| ||||||||||| |||| ||| || || ||||||| | |||| ||| Sbjct 196 AACTATATGGGTAAATTAGCTGTGACTAA-GTGCAACTATGTTGACGTTGGTGGAAG--- 251 Query 1511 TAGGCATACCCTTGAGTT-TCGTATGTGGGTTCTGGAGCATGTTGAGAAA-ATGGAAT-G 1567 | | | || ||||||| | || |||||||||| ||| ||||||||||| | ||||| | Sbjct 252 -A--CGTTCCGTTGAGTTGT-GTTTGTGGGTTCTAGAGGATGTTGAGAAACA-GGAATGG 306 Query 1568 GTCGGAA-TATGTCTACACTTTGTTGGATAGTAATGAAGCAGC-TGATGATCTTGTTGTT 1625 ||| || |||||||||||||| || || ||||||| | || | || || | Sbjct 307 GTC--AAGTATGTCTACACTTTACCGG--AG-AATGAAG-TCCTTG--GTTCCTG-CG-A 356 Query 1626 GATCTTGT-TGTTGTCGGGA-TGACTGCTACTGGTGATATTATTTTGTCG-AAGATAG-A 1681 | | || | |||| | ||| ||||||| | || |||||| |||||| | | || || | Sbjct 357 G-T-TT-TCAGTTG-CTGGAGTGACTGCAAGAGGCGATATTGTTTTGT-GTATGA-AGTA 410 Query 1682 TACATGTGAACCGAT-TTATGtttttttCTTCAATCCCGAAAGGAAAACTTTCCAAAGTG 1740 ||||||| ||||| | ||||| || | |||| ||||||||| |||||| ||||||||| Sbjct 411 TACATGTAAACCG-TACTATGTATTCTACTTCGATCCCGAAAAGAAAACCCTCCAAAGTG 469 Query 1741 TTGAAATCCAAGGTTTTGGAGCTAATCGTGA-----TTG--CA--G-----A-GTTTACC 1785 ||||||||||||||||||||||||| | ||| ||| || | | ||||| Sbjct 470 TTGAAATCCAAGGTTTTGGAGCTAAGCTTGAAGAGGTTGAGCATCGTGGTGAAGTTTATG 529 Query 1786 CCTTTGTAGACTATGTAGATGATCTTAG-CTTAAACCATGCAAAGCAACTCAAGTCAAGC 1844 ||||||| |||||||| || |||||||| || |||| ||||||||||| ||||||||||| Sbjct 530 CCTTTGTTGACTATGTTGAGGATCTTAGTCT-AAACGATGCAAAGCAATTCAAGTCAAGC 588 > AT1G47350.1 | Symbols: | F-box associated ubiquitination effector family protein | chr1:17358447-17360722 REVERSE LENGTH=1587 Length=1587 Score = 137 bits (74), Expect = 3e-31 Identities = 258/344 (75%), Gaps = 24/344 (7%) Strand=Plus/Plus Query 117 TGTAGCTATGCTTCTGGTTTGGCCTATCTCTCTGATATGAGAAT-ATCAGTGAAGGATGA 175 ||| ||||||| |||||| || ||| ||| || |||| | || | || | | ||| | Sbjct 535 TGTGGCTATGCGTCTGGTATGATGTATTTCTATGGTATGCGGATCA-AAGAGGATGATTA 593 Query 176 GGATGTAGTGCGTGTGATATGTAACCCTATCACGGGAAAGTATACGGTCTTACCT-AAAC 234 |||| ||||| |||| ||||||||||||| |||||| | ||| || ||| ||| | Sbjct 594 CGATGGAGTGCCTGTGCTATGTAACCCTATAACGGGACATTATGCGACCTTGCCTGCTAT 653 Query 235 TGAGAAGG--TACGTA-AAGTCGTATAG-TTATTTAGTGTTTGATCCAATTGACAAGCAA 290 || |||| || | | ||| ||| ||| || ||| | || |||||| |||||||||||| Sbjct 654 TG-CAAGGTTTA-G-ACAAG-CGTTTAGCTT-TTTCGGGTATGATCCGATTGACAAGCAA 708 Query 291 TTCAAGGTATTGTTCATG-----G-CTTATCCATCTGGTCCTGATGATCATAAAATTCTG 344 |||||||||||||||||| | |||| |||| | |||||||| |||||||| ||||| Sbjct 709 TTCAAGGTATTGTTCATGATCATGGCTTACCCATGTAGTCCTGATCATCATAAAGTTCTG 768 Query 345 AC-CTTGGGAACTCGAAAAATGAGGTGGAGGAAAATCCATT-GTCCCTTAACTCATGATC 402 | ||||| || | || ||||||| ||||| || || | || |||||| ||||| Sbjct 769 AAACTTGG-AAGTGGAGAAATGAGTTGGAG-AAGATTAAAACGTACCTTAAGACATGAAA 826 Query 403 CTTTTT-GTGGAGGGATATGCATCAATGGGGTTTTTTATTACTT 445 || | ||| ||| |||||||||||||||||| | |||||||| Sbjct 827 -TTATGAGTGAAGGTATATGCATCAATGGGGTTGTGTATTACTT 869 > AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | chr1:11026338-11026784 REVERSE LENGTH=447 Length=447 Score = 111 bits (60), Expect = 2e-23 Identities = 337/461 (73%), Gaps = 57/461 (12%) Strand=Plus/Plus Query 1294 ATGAGCCTTTTTGGGAAAG-GATATGCATCAATGGGGTTTTGTATTACAAAG-CTCAC-- 1349 |||| ||||||| |||||| |||||||||||||||||||||||||||| | || | Sbjct 1 ATGAACCTTTTT-GGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTT 58 Query 1350 CAGTTTGATGGA-AGGTCTTATGTAATAGTTTGCTTT-GATGTTAGGTCTGAGAAATTCA 1407 ||| | ||||| | |||| || | |||||| |||| ||| |||||||||||||||||| Sbjct 59 CAGCTC-ATGGATA--TCTTCTG-A-TAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCA 112 Query 1408 AGTTCATTGAGGCAACATTTTGTAATATGTTT-A-CT-CAA--TTGATAAACTATAAGGG 1462 | || || | ||| || | | | | ||| | || ||| ||||||||||| || || Sbjct 113 ATTTTATCAATGCATCAAGCT-TCCTTT-TTTCATCTACAAAATTGATAAACTACAAAGG 170 Query 1463 TAAATTAGGTGTGG-TTAATTTGAAGAATGTTGATGATGGTACAAGTTTTAGGCATACCC 1521 ||||||||||| || || ||||| | || | ||| |||| || | | | ||| Sbjct 171 TAAATTAGGTG-GGATTGATTTGGCGTATAATCATGGTGGT----GTAT-A----T-CCC 219 Query 1522 -TTGAGTTTCGTATGTGGGTTCTGGAGCATGTTGAGAAA-ATGGAATGGTCG-GAATATG 1578 ||||||| |||||||||||||| ||| |||| |||||| | | |||||||| || ||| Sbjct 220 GTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACG-AATGGTCGAGAC-ATG 277 Query 1579 TCTACACTTTGTTGGATAGTAATGAAG--CAGCTGATG-ATCTTGTTGTTGATCTTGTTG 1635 | ||| ||||| ||| | | |||| |||| | || | || | || ||| | Sbjct 278 TTTACTCTTTGCCGGAGACCATTGAATTTCAGCAG-TGTAACTACAA-T--AT-TTGC-G 331 Query 1636 TTG-TCGGGATGACTGCTACT-GGTGATATTATTTTGTCGAAG--ATAGATA-C-ATGTG 1689 ||| | ||||||| ||||| | ||||| ||| |||| ||| || ||| ||| | | | Sbjct 332 TTGGT-GGGATGAATGCTA-TAGGTGAAATTGTTTTTTCGGAGTCATATATATCTACATC 389 Query 1690 -AA-CCGATTTATGtttttttCTTCAATCCCGAAAGGAAAA 1728 || ||| |||||||||| | |||||||||||||| ||||| Sbjct 390 CAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAGAAAA 430 > AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444 REVERSE LENGTH=1203 Length=1203 Score = 106 bits (57), Expect = 9e-22 Identities = 467/650 (72%), Gaps = 87/650 (13%) Strand=Plus/Plus Query 1001 TTGTAGCTATGCCTCTGGTTTGATCTATTTTCATAATATGTGC-ATCCCAAGGGAGGATG 1059 |||||| ||||| ||| ||||||||||||| | ||||||| | |||| || | ||| || Sbjct 318 TTGTAGTTATGCTTCTAGTTTGATCTATTTCCCTAATATG-ACGATCCGAAAGAAGGGTG 376 Query 1060 AGGATACA-AAGCGTGTGATATGTAACCCTACCAC-CGG-A-CA---GTATGTGATCTT- 1111 | ||| || | |||||||||||||||||| ||| || | | |||||||||||| Sbjct 377 ACGAT-CACTTGGGTGTGATATGTAACCCTAGCACAGGGCAGTATGGGTATGTGATCTTA 435 Query 1112 --ACCTGAACT-GA---GAA-AGCACTTCATGT-C-GTACAGCTATTTAGGGTTTGATCC 1162 |||| ||| || || ||| | | | | | ||| | | ||||||||||||||| Sbjct 436 CCACCTTTACTGGATTTCAAGAGC-GTGCCT-TACGGTA-A-ATTTTTAGGGTTTGATCC 491 Query 1163 AATAGACAAGGAATTCAAGGTATTGCTCATGAACACTAGT-GGTTATATAGCTTATA-AT 1220 || |||||| ||||||||||||| || | | || | | || | | | || | || Sbjct 492 GATTGACAAGCAATTCAAGGTATTAATCCCG---A-TATTCGATT-T-T-G-ATAAACAT 543 Query 1221 GATACAGATCATCATATT-TTGACATTAGGAACTGGAAA-A-ATGAGGTGGAGAAAGATT 1277 | || |||||||||||| || ||||||||| || |||| | || ||||||| ||||| Sbjct 544 CAAACGGATCATCATATTCTT-ACATTAGGAGCT-GAAACAGTTG-GGTGGAGGAAGATC 600 Query 1278 CAGTGTCCTTTTAAC-C-ATGAGCCTTTTTGGGAAAGG----ATATGCATCAATGGGGTT 1331 || | ||| || || | || || | | | || || || |||||||||||| || Sbjct 601 CAATCTCC-CTT-ACGCTATCTTCC-TCATAGTAATGGAACAATTTGCATCAATGGGATT 657 Query 1332 TTGTATTACAAAGCTCACCAGTT--TGATGGAA-GG-T-CTTATGTAATAGTTTGCTTTG 1386 ||||||||| |||| | | || | ||| || || | |||| |||||||||||| Sbjct 658 TTGTATTACCTAGCT-A-AAATTAATTATGCAATGGATAAAAATGTGCTAGTTTGCTTTG 715 Query 1387 ATGTTAGGTCTGAGAAATTCAAGTT-C-A--T-TGAGGCAACATTTTGTAATATGTTTAC 1441 |||||||||||||||| || ||| | | | | | || ||| || | | | ||| Sbjct 716 ATGTTAGGTCTGAGAATTTTGTGTTTCTACGTCTTAA-CA-CATACTGC--TCT-TCTAC 770 Query 1442 TCAATTGATAAACTATAAGGGTAAATTAGGTGTGGTTAATTTGAAGA--ATGTTGATGAT 1499 | ||||| |||||||||||||||||||||| || ||||| |||| ||||||||||| Sbjct 771 TAAATTGGTAAACTATAAGGGTAAATTAGGCATGATTAATC--AAGAGTATGTTGATGAT 828 Query 1500 GGTACAAGTTTTAGGCATACCCTTGAGTTTCGTATGTGGGTTCTGGAGCATGTTGAGAAA 1559 ||| ||||| | |||| |||| || |||||||||| ||| |||| | |||| Sbjct 829 GGTG---GTTTT---C---CCCTAAAGTTAAGTGTGTGGGTTCTAGAGGATGTCG-GAAA 878 Query 1560 ATG--GAATGGTCGGA-ATATGTCTACACTTTGTTGGAT-AGTAATGAAG 1605 | | ||||||||| | |||||||||||||||| |||| | |||| ||| Sbjct 879 A-GAAGAATGGTCG-ACATATGTCTACACTTTGAGGGATGA-TAATAAAG 925 > AT1G30921.1 | Symbols: | pseudogene, hypothetical protein | chr1:11007112-11008238 REVERSE LENGTH=1127 Length=1127 Score = 102 bits (55), Expect = 1e-20 Identities = 239/324 (74%), Gaps = 27/324 (8%) Strand=Plus/Plus Query 1444 AATTGATAAACTATAAGGGTAAATTAGGTGTGGTTAATTTGAAGAATG-TTGATGATGGT 1502 ||||||||||||||||||||||||||||| ||||| ||||| |||| | || |||||| | Sbjct 750 AATTGATAAACTATAAGGGTAAATTAGGTTTGGTTGATTTGGAGAAGGATT-ATGATGCT 808 Query 1503 ACAAGTTTTAGGCATACCCTTGAGTTTCGTATGTGGGTTCTGGAGCATGTTGAGAAAATG 1562 | | | | | || ||| ||| |||||| |||||| ||| |||| |||||| | Sbjct 809 GGA--TAT----C-T-CC-TTGGGTTACGTATGCAGGTTCTAGAGGATGTCGAGAAAGGG 859 Query 1563 GAATGGTCGGAATATGTCTACACTTTGTTGGATAGTAATGAAGCAGCTGATGATCTTGTT 1622 |||| | | |||||| ||||||| || || | | | ||| | | | | | |||| | Sbjct 860 GAATAGAAGAAATATGCCTACACTGTGAGGGCT-G-A-TGA-GAA--TAAAG-TCTT-TA 911 Query 1623 GTTG-A-TCTTGTT-GTTGTCGGGATGACTGCTACTGGTGATATTATTTTGTCGAAGA-T 1678 | |||| | ||||| ||| |||||| | ||||| ||| ||||| |||||| | Sbjct 912 ACAACAATCTT-TCCGTTGTTGGGGCAACTGCTTCAGGTGAAATTGTTTTGGCGAAGAAT 970 Query 1679 AGATACATGTGAA-CCGATTTATGtttttttCTTCAATCCCGAAAGGAAAACTTTCCAAA 1737 || ||| ||| ||| |||||||||| | || |||||||| ||||| ||| ||| || Sbjct 971 T-ATGCATA-GAAACCGTTTTATGTTTTCTAATTTAATCCCGATAGGAACACTCTCCGAA 1028 Query 1738 GTGTTGAAATCCAAGGTTTTGGAG 1761 ||||||||||||||||| || ||| Sbjct 1029 GTGTTGAAATCCAAGGTGTTAGAG 1052 > AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972 REVERSE LENGTH=921 Length=921 Score = 95.3 bits (51), Expect = 2e-18 Identities = 103/127 (81%), Gaps = 8/127 (6%) Strand=Plus/Plus Query 182 AGTGCGTGTGATATGTAACCCTATCACGGGAAAGTATACGGT-CTTACCTAAACTGAGAA 240 |||||||||||||||||||||||| ||||| |||| | | ||||||| | |||| || Sbjct 384 AGTGCGTGTGATATGTAACCCTATAACGGGCCGGTATGC-ATCCTTACCTTATCTGAAAA 442 Query 241 GGTAC-GTAAA-GTCGTATAG-TTATTTAGTGTTTGATCCAATTGACAAGCAATTCAAGG 297 ||||| | ||| | || || || ||| | ||||||||||||||||||||||||||||| Sbjct 443 GGTACAG-AAAGGAATTA-AGCTT-TTTCGGGTTTGATCCAATTGACAAGCAATTCAAGG 499 Query 298 TATTGTT 304 || ||| Sbjct 500 AATGGTT 506 > AT2G02660.1 | Symbols: | F-box associated ubiquitination effector family protein | chr2:738504-739769 FORWARD LENGTH=1266 Length=1266 Score = 86.1 bits (46), Expect = 1e-15 Identities = 84/101 (83%), Gaps = 7/101 (7%) Strand=Plus/Plus Query 1312 GGATATGCATCAATGGGGTTTTGTATTACAAAGCTCACCAG-TTTGATGGAAG-GTC--- 1366 ||||||||||||||||||||||||||| | |||| | || ||| | || ||| Sbjct 599 GGATATGCATCAATGGGGTTTTGTATTTCTTAGCTGA-GAGAAATGA-GCTAGAGTCTGA 656 Query 1367 TTATGTAATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 1407 |||||| |||||||||||||||||||||||||||||||||| Sbjct 657 TTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 697 > AT1G31090.1 | Symbols: | F-box family protein | chr1:11094407-11095649 FORWARD LENGTH=936 Length=936 Score = 78.7 bits (42), Expect = 2e-13 Identities = 90/113 (80%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 119 TAGCTATGCTTCTGGTTTGGC-CTATCTCTCTGATATGA-GAATATCAGTGAAGGATGAG 176 |||||||||||||||||| || ||| || || |||| | | || ||| | |||| Sbjct 318 TAGCTATGCTTCTGGTTT-GCTATATTTCCCTAATAT-ACGTATCTCAAACCATAATGAC 375 Query 177 GATGTAGTGCGTGTGATATGTAACCCTATCACGGGAAAGTATACGGTCTTACC 229 |||||||||||||||||||||||||||| ||| || ||||| || ||||||| Sbjct 376 GATGTAGTGCGTGTGATATGTAACCCTAGCACAAGACAGTATGCGATCTTACC 428 > AT1G33010.1 | Symbols: | F-box and associated interaction domains-containing protein | chr1:11959287-11960591 FORWARD LENGTH=1086 Length=1086 Score = 62.1 bits (33), Expect = 2e-08 Identities = 44/49 (90%), Gaps = 2/49 (4%) Strand=Plus/Plus Query 1443 CAATTGATAAACTATAAGGGTAAATTAGGTGTGG-TTAATTTGAAGAAT 1490 ||||||||||||||||||||||||||||||| || ||| || ||| ||| Sbjct 538 CAATTGATAAACTATAAGGGTAAATTAGGTG-GGATTAGTTGGAATAAT 585 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 99146076375 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5