BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922192
Length=973
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42430.1 | Symbols: | F-box and associated interaction doma... 309 3e-83
AT1G33020.1 | Symbols: | F-box and associated interaction doma... 180 3e-44
AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-1101... 178 9e-44
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 169 6e-41
AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 161 9e-39
AT1G33010.1 | Symbols: | F-box and associated interaction doma... 126 3e-28
AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 115 7e-25
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 100 2e-20
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 75.0 1e-12
> AT5G42430.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16971312-16972499 REVERSE LENGTH=1188
Length=1188
Score = 309 bits (167), Expect = 3e-83
Identities = 582/770 (76%), Gaps = 78/770 (10%)
Strand=Plus/Plus
Query 134 TGTGATATGTAACCCTAGCACCGGACACTGTGCGATCTTACCTAAA---CTGAAAACGGA 190
||| ||||||||||||||||| ||||| | |||||| ||||||||| || ||| |
Sbjct 366 TGTCATATGTAACCCTAGCACGGGACATTATGCGATGTTACCTAAATTGTTGTTGACGTA 425
Query 191 TATACAGACAAGAAGCTATTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTGTTGAT 250
| | |||| ||||||| ||| |||||||||| ||| ||||||||||||||| ||| |
Sbjct 426 TGGAGAGACGAGAAGCTTTTTTTTGTTTGATCCGGTTGGCAAGCAATTCAAGGTATTGCT 485
Query 251 CATG-ATGGGTATATTTAATAGTG--A-AAGGGTCCA-TCGTATTCTGACATTAGGAACT 305
|||| || | ||| |||| || | || || || || |||| ||||||| ||||||
Sbjct 486 CATGAATAAG-ATAAACAATAATGAAACAAAGG-ACATTCATATTTTGACATTGGGAACT 543
Query 306 GGAAAAATGACG-TGGAGGAATAT-C--CAATGCCCTTTTACT-GAGTATCCTTT-GCTT 359
||||| ||| | |||||||| || | |||||||| || | | | ||| ||| || |
Sbjct 544 AGAAAAGTGA-GATGGAGGAAGATCCAACAATGCCCCTTGA-TCCA-TATTGTTTCGCAT 600
Query 360 AAAGGGATATGCATCAATGGGGTTTTGTATTACTTAGCACAATATATCGA-TGAACGAAA 418
|| |||||||||||||||||| |||||||||| ||| | |||| | | || | | |
Sbjct 601 GAATGGATATGCATCAATGGGGCTTTGTATTACATAG--C-TTATAAC-ATTG-ATG--A 653
Query 419 TCATATATGTTATATGATAGTTTGCCTTGATGTTAGGTCCGAGAAATTC-AA-G--T--- 471
| | | || ||| ||||||||| ||||||| ||||||||||||||| || | |
Sbjct 654 T-TTCT-TGGGGTAT-ATAGTTTGCTTTGATGTCAGGTCCGAGAAATTCAAATGTCTAAA 710
Query 472 TCGTAGACGCAA-TCTGCTTGTT-T---C-A--T-C--AATTGATAAACTATAAGGGGAA 520
|| || || ||| ||| || || | | | | | |||||||| ||||||| || ||
Sbjct 711 TC-TAAAC-CAAGACTG-TTTTTCTGAACGATCTACTAAATTGATATACTATAAAGGTAA 767
Query 521 ATTAGGTG-GGATTAATTTGAACTA--C-AAT---AATGGATTTCCCCTT-A---A--TA 567
|||||||| || |||||||||| || | || ||||||||||||| | | ||
Sbjct 768 ATTAGGTGTGG-TTAATTTGAAGTATGCTCATGGCGGTGGATTTCCCCTTAAGTTATGTA 826
Query 568 TGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCGAA-ATATGTATACTCTTTGTGT 626
||||||||||||| ||||| |||||||| |||||| | || || ||| ||| ||||| |
Sbjct 827 TGTGGGTTCTAGAGGATGTGGAGAAACAGGAATGGAC-AACATCTGTGTACACTTTGAGG 885
Query 627 GCTGA-GAGTAAAGTCGTTAAGGTTAACCCCAAGCTTTCTGTTGTTGGGATGACTGCTAC 685
| ||| || || ||||||||||||| || | | |||| | |||||||||| ||||||||
Sbjct 886 GATGAGGA-TAGAGTCGTTAAGGTTTACTACGATCTTTTTATTGTTGGGATAACTGCTAC 944
Query 686 AGGTGATATAGTTTTGTCGGGGAAGTTTATATCTAATCCATTTTATGTTTTTTACTTCAA 745
|||||| || |||||| || ||| ||| ||| || |||||||| || ||||| ||
Sbjct 945 AGGTGAAATTGTTTTGGCGAAGAAAAAGGTATGTAAGCCGTTTTATGTCTTCTACTTTAA 1004
Query 746 TCCCGAAAGGAACACTCTCCTAAGTGTTGAAATCAAAGGTCTTG-ATTAT-CTT--G--G 799
|| ||||||||||||||||||||||||||||||| ||||| ||| | || | | |
Sbjct 1005 TCTCGAAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTTTTGGAGAATACCAAAGCTG 1064
Query 800 TAG-AGT-TTC-CGTCTTTGTAGACCATGTAGAGGATCTTAATGTTTACG 846
| | ||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct 1065 TTGTAGTGTTCACGCCTTTGTAGACCATGTAGAGGATCTTAATGTTTACG 1114
> AT1G33020.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:11962746-11964832 FORWARD LENGTH=1647
Length=1647
Score = 180 bits (97), Expect = 3e-44
Identities = 395/528 (75%), Gaps = 64/528 (12%)
Strand=Plus/Plus
Query 134 TGTGATATGTAACCCTAGCACCGGACACTGTGCGATCTTACCTAAACTGAAAACGGA-TA 192
||||||||||||||||| ||| ||||| | |||||||||| | |||||| ||| | |
Sbjct 396 TGTGATATGTAACCCTATCACGGGACAATATGCGATCTTA-C--AACTGATAAC--ATTC 450
Query 193 TAC-AGACA-AGAAGCTATTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTGTTGAT 250
|| ||| | ||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 451 CACGAGA-AGAGAAGCTTTTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTATTGCG 509
Query 251 CATGATGGGTATATTTAATAGTGAAAG-G--GTCCATCGTATTCTGACATTAGGAAC-TG 306
||||| |||| | | | ||| | | || || | |||||||||||||| ||| ||
Sbjct 510 CATGAAA--TATAATGA-TCGTGGTATTGTTGTTCACCATATTCTGACATTAG-AACCTG 565
Query 307 GAAAAATGACGTGGAGGAATATCCAATG-CCCTTTTAC--TGAGTATCCTTTGCTTA-AA 362
| ||||||| |||||| || |||| ||| ||||| | ||| | ||||| || ||
Sbjct 566 GCAAAATGAGGTGGAGAAAAATCCGATGTCCCTTAGCCCATGA--A-CCTTT-CTGGGAA 621
Query 363 GGGATATGCATCAATGGGGTTTTGTATTACTTAGCACAAT-ATA-TCGATGAACGAAATC 420
| ||||||| |||||||||||||||||||||||| || | | | |||| | | ||
Sbjct 622 GAGATATGCGCCAATGGGGTTTTGTATTACTTAGCTGAACCA-ACT-GATGGAGGG--TC 677
Query 421 ATATATGTTATATGATAGTTTGCCTTGATGTTAGGTCCGAGAAATTCAAGTTCGTAGACG 480
| ||||| ||||| | | || |||||||| |||| ||||||||||| || | ||||
Sbjct 678 -T-TATGTGATATG-T--T--GCTTTGATGTTCGGTCTGAGAAATTCAAATTTATTGACG 730
Query 481 CAATCTGCTT-G-T--TT-C---AT-CAATTGATAAACTATAAGGGGAAATTAGGTGGGA 531
||| ||||| | | || | || |||||||| || |||||||| ||| |||||||||
Sbjct 731 CAAAATGCTTTGGTGATTTCTCTATTCAATTGATCAATTATAAGGGTAAACTAGGTGGGA 790
Query 532 TTAATTTGAACTACAATA------ATGGATTTCC--CC-TT-A-----ATATGTGGGTTC 576
||| || ||| || ||| ||||| | || || | ||||||||||||
Sbjct 791 TTAGTTGGAAGTATGATACCGTCGATGGAAAGCGTACCGTTGAGTTGTATATGTGGGTTC 850
Query 577 TAGAAGATGTCGAGAAACAAGAA-TGGTCGAAATATGTATACTCTTTG 623
|||| |||||||||||||| ||| ||||| ||||| || ||| |||||
Sbjct 851 TAGAGGATGTCGAGAAACA-GAAATGGTCCAAATACGTCTACCCTTTG 897
> AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-11011792
REVERSE LENGTH=1125
Length=1125
Score = 178 bits (96), Expect = 9e-44
Identities = 241/306 (79%), Gaps = 29/306 (9%)
Strand=Plus/Plus
Query 500 ATTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTTGA-AC-T-ACAAT-AA--TGG 553
|||||||||||||||||| ||| |||||| ||||||||||| | | | || || ||
Sbjct 747 ATTGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCTATGAACGTGT 806
Query 554 ATTTCCCCTT-A---A--TATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCGAA 607
|||||||||| | | |||| ||||||||| ||| | |||||||| ||||||||||
Sbjct 807 ATTTCCCCTTCAGTTACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGAC 866
Query 608 ATATGTATACTCTTTG-TGTGCTGAGAGTAAAGTCGTTAAGGTTAACCCCAAGCTTTCTG 666
|||||| ||| ||||| || ||||||| || ||||||||| | | | | |||| |
Sbjct 867 ATATGTCTACACTTTGATG-GCTGAGAATATAGTCGTTAA-G-T------ATG-TTTCCG 916
Query 667 TTGTTGGGATGACTGCTACAGGTGATATAGTTTTGTCGGGGAAGTTTAT--AT-CTAATC 723
| |||||||||||||||||||||||||| |||||| | | || || || | || |
Sbjct 917 TGGTTGGGATGACTGCTACAGGTGATATTGTTTTG--GTGAAAACAAATGCATGC-AAAC 973
Query 724 CATTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCTAAGTGTTGAAATCAAAG 783
| |||||||| || ||||| ||||||| |||||||||||||||||||||||||||| |||
Sbjct 974 CGTTTTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAG 1033
Query 784 GTCTTG 789
|| |||
Sbjct 1034 GTGTTG 1039
> AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444
REVERSE LENGTH=1203
Length=1203
Score = 169 bits (91), Expect = 6e-41
Identities = 458/623 (74%), Gaps = 73/623 (12%)
Strand=Plus/Plus
Query 209 TTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTGTTGATCATGATGG--GTATATT- 265
|||||||||||||||||||||||||||||||||||| || ||| ||| | || ||
Sbjct 477 TTTAGGGTTTGATCCGATTGACAAGCAATTCAAGGTATTAATCCCGATATTCG-ATTTTG 535
Query 266 -TAAT-AGTGAAAGGG-TCCATCGTATTCTGACATTAGGAACTGGAAAAA-T-GACGTGG 320
||| | | ||| || || ||| |||||| ||||||||| ||| ||| | | | ||||
Sbjct 536 ATAAACA-TCAAACGGATC-ATCATATTCTTACATTAGGAGCTG-AAACAGTTGG-GTGG 591
Query 321 AGGAATATCCAATG-CCCTTTTACTGAGTATCCTTTGCT--TA--AAGGGAT-A-T--GC 371
||||| ||||||| ||||| || | |||| || || || || ||| | | ||
Sbjct 592 AGGAAGATCCAATCTCCCTT--AC-GC-TATC-TTC-CTCATAGTAATGGAACAATTTGC 645
Query 372 ATCAATGGGGTTTTGTATTACTTAGC-ACAATATA-TCGATG-AACGAAATCATATATGT 428
||||||||| ||||||||||| |||| | ||| || | ||| || | | | | | ||||
Sbjct 646 ATCAATGGGATTTTGTATTACCTAGCTAAAAT-TAATT-ATGCAATGGA-TAAAA-ATGT 701
Query 429 TATATGATAGTTTGCCTTGATGTTAGGTCCGAGAAATTCAAGTT-CGTA-GACG---CA- 482
| |||||||| ||||||||||||| ||||| || ||| | || | | ||
Sbjct 702 -----GCTAGTTTGCTTTGATGTTAGGTCTGAGAATTTTGTGTTTC-TACGTCTTAACAC 755
Query 483 AT-CTGCTTGTT-T-CATCAATTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTT- 538
|| ||||| || | | | ||||| ||||||||||||| |||||||| |||||||
Sbjct 756 ATACTGCTC-TTCTAC-TAAATTGGTAAACTATAAGGGTAAATTAGGCATGATTAATCAA 813
Query 539 GA--AC-TACA--ATAATGGATTTCCCCTTAA-T-A--TGTG-GG-TTCTAGAAGATGTC 587
|| | | | || ||| |||||||| || | | |||| || ||||||| ||||||
Sbjct 814 GAGTATGTTGATGATGGTGGTTTTCCCCTAAAGTTAAGTGTGTGGGTTCTAGAGGATGTC 873
Query 588 GAGAAAC-AAGAATGGTCGAAATATGTATACTCTTTGTGTGCTGAGAGTAAAGTCGTTAA 646
| |||| |||||||||||| |||||| ||| ||||| | | ||| | |||||||| | |
Sbjct 874 G-GAAAAGAAGAATGGTCGACATATGTCTACACTTTGAGGGATGATAATAAAGTCGATCA 932
Query 647 GGTTAACCCCAAGCTTTCTGTTGTTGGGATGACTGCTACAGGTGATATAGTTTTG-TCGG 705
|||||| || || || ||||||||| |||||||| ||||||| || |||||| | |
Sbjct 933 GGTTAAATATAATCTCTCCGTTGTTGGGGTGACTGCTTCAGGTGAAATTGTTTTGGT-GA 991
Query 706 GGAAGTTT-ATAT-CT-AATCCATTTTATGTTTTTTACTTCAATCCCGA-AAGGAACACT 761
|||| | | | || || |||||||||||||| ||||| || ||||| || || |||
Sbjct 992 AGAAGACTCAAACACTTAAGCCATTTTATGTTTTATACTTTAACCCCGACAAA-AATACT 1050
Query 762 CTCCTAAGTGTTGAAATCAAAGG 784
||| ||| ||||||| |||||||
Sbjct 1051 CTCTTAACTGTTGAAGTCAAAGG 1073
> AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899
FORWARD LENGTH=1068
Length=1068
Score = 161 bits (87), Expect = 9e-39
Identities = 236/305 (77%), Gaps = 22/305 (7%)
Strand=Plus/Plus
Query 499 AATTGATAAACTATAAGGGGAAATTAGGTGGGA-T-TAATTTGAAC-T-A-CAATAATGG 553
||||||||||||||||||| |||||||||| || | |||| ||| | | || | |||
Sbjct 536 AATTGATAAACTATAAGGGTAAATTAGGTGTGACTATAATG-GAAGATTATCA-TGGTGG 593
Query 554 ATTTCCCCTTAA-T-----ATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCGAA 607
|||||||||||| | |||||||||||||| |||||||||||| | |||||| |||
Sbjct 594 ATTTCCCCTTAAGTTGCGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGAG 653
Query 608 ATATGTATACTCTTTGTGTGC-TGAGAGTAAAGTCGTTAAGGTTAACCCCAA-GCTTTCT 665
||||| ||| ||||| | || ||||| |||||||| | || || | | | | | |
Sbjct 654 ATATGCCTACACTTTGAG-GCCTGAGAATAAAGTCG--A-GGACAATGACTATG-TATAT 708
Query 666 GTTGTTGGGATGACTGCTACAGGTGATATAGTTTTGTCGGGGA-AGTTTATATCTAATCC 724
||||||||| |||||| ||||||| || |||||| || | || | || ||| ||
Sbjct 709 GTTGTTGGGGCAACTGCTTCAGGTGAAATTGTTTTGACGAA-ACAGAATGCATATAAACC 767
Query 725 ATTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCTAAGTGTTGAAATCAAAGG 784
||||||||||| ||||| | ||| |||||||||||||||||||| ||||||||| ||||
Sbjct 768 GTTTTATGTTTTCTACTTTAGTCCTGAAAGGAACACTCTCCTAAGCGTTGAAATCCAAGG 827
Query 785 TCTTG 789
| |||
Sbjct 828 TGTTG 832
> AT1G33010.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:11959287-11960591 FORWARD LENGTH=1086
Length=1086
Score = 126 bits (68), Expect = 3e-28
Identities = 214/280 (76%), Gaps = 27/280 (10%)
Strand=Plus/Plus
Query 498 CAATTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTTGAACTACAATAATG-GATT 556
|||||||||||||||||||| |||||||||||||||| || ||| | ||| ||| | ||
Sbjct 538 CAATTGATAAACTATAAGGGTAAATTAGGTGGGATTAGTTGGAA-T--AATCATGAGGTT 594
Query 557 --TCCCCTT-A-----ATATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCGAAA 608
|||| || | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 595 GCTCCCGTTGAGTTGTCTATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCCAAA 654
Query 609 TATGTATACTCTTTGTGTGCTGAGAGTAAAGTCGTTAAGGTTAACCCCAAGCTTTCTGTT 668
|||| ||| ||| || || ||| | |||| ||| | ||| || | | |
Sbjct 655 AATGTCTACA-TTT-TGC-CTAAGAATGTAGTCCCTAA--T-AACTGGTTGCA--C-GCT 705
Query 669 GTTGG-GATGACTGCT-ACAGGTGATATAGTTTTGTCGG-GGAAGTTTATATCTAATCCA 725
| ||| | |||||| | | ||||||||| ||||| |||| || || |||| |||||
Sbjct 706 GCTGGAG-TGACTGTTGA-AGGTGATATTGTTTTCTCGGAGGCTGTAG-TATCCAATCCG 762
Query 726 TTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCC 765
||| ||||||| ||||| |||||||||| |||||||||||
Sbjct 763 TTTGATGTTTTCTACTTTAATCCCGAAAAGAACACTCTCC 802
Score = 54.7 bits (29), Expect = 2e-06
Identities = 32/33 (97%), Gaps = 1/33 (3%)
Strand=Plus/Plus
Query 811 TCTTTGTAGACCATGTAGAGGATCTTAATGTTT 843
|||||||||||||||||||||||||||| ||||
Sbjct 860 TCTTTGTAGACCATGTAGAGGATCTTAA-GTTT 891
> AT1G30945.1 | Symbols: | pseudogene, hypothetical protein |
chr1:11026338-11026784 REVERSE LENGTH=447
Length=447
Score = 115 bits (62), Expect = 7e-25
Identities = 270/362 (75%), Gaps = 47/362 (13%)
Strand=Plus/Plus
Query 433 TGATAGTTTGCCTT-GATGTTAGGTCCGAGAAATTCAAGTTCGT-AGACGCA--AT-CTG 487
||||||||| | || ||| ||||||| ||||||||||| || | | | ||| | ||
Sbjct 77 TGATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAATTTTATCA-ATGCATCAAGCTT 134
Query 488 C-TTGTTTCATC-A-A---TTGATAAACTATAAGGGGAAATTAGGTGGGATTAATTTGAA 541
| || ||||||| | | ||||||||||| || || ||||||||||||||| |||||
Sbjct 135 CCTTTTTTCATCTACAAAATTGATAAACTACAAAGGTAAATTAGGTGGGATTGATTTGG- 193
Query 542 C-TACAATAATGGA--T-T-TC-CCC-TT-A---A--TATGTGGGTTCTAGAAGATGTCG 588
| || ||| |||| | | | ||| || | | ||||||||||||||| |||||||
Sbjct 194 CGTATAATCATGGTGGTGTATATCCCGTTGAGTTACGTATGTGGGTTCTAGAGGATGTCG 253
Query 589 AGAAACAAGAATGGTCGAAATATGTATACTCTTTGT-GTGCTGAG-AGTAAAGTCGTTAA 646
||||||| |||||||||| | |||| ||||||||| | | || | | || | || |
Sbjct 254 AGAAACACGAATGGTCGAGACATGTTTACTCTTTGCCG-GA-GACCATTGAA-T--TTCA 308
Query 647 G--GT-TAACCCCAAGCTTT-CTGTTGTTGGGATGACTGCTACAGGTGATATAGTTTTGT 702
| || |||| ||| ||| | |||| |||||||| ||||| |||||| || ||||| |
Sbjct 309 GCAGTGTAACTACAATATTTGC-GTTGGTGGGATGAATGCTATAGGTGAAATTGTTTTTT 367
Query 703 CGGGGA-AGTTTATATCTA-ATCCA-----TTTTATGTTTTTTACTTCAATCCCGAAAGG 755
||| | | | |||||||| ||||| ||||||||||| |||||||||||||||| |
Sbjct 368 CGGAGTCA-TATATATCTACATCCAAACCGTTTTATGTTTTCTACTTCAATCCCGAAAAG 426
Query 756 AA 757
||
Sbjct 427 AA 428
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 100 bits (54), Expect = 2e-20
Identities = 125/156 (80%), Gaps = 18/156 (12%)
Strand=Plus/Plus
Query 726 TTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCTAA-GTGTTGAAATCAAAGG 784
||||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct 1217 TTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCC-AACGTGTTGAAATCCAAGG 1275
Query 785 TCTTG---A--T-T-AT------CTTGGTAGAGTTTCCGTCTTTGTAGACCATGTAGAGG 831
| ||| | | | | |||| |||||||| | ||||||| |||| |||||||
Sbjct 1276 TTTTGGTGAAGTGTTAAAGAAAACTTG-TAGAGTTTGCACCTTTGTAAACCACGTAGAGG 1334
Query 832 ATCTTAATGTTTACGA-TACAAAGCAACTCAATTCA 866
||||||||||| |||| | ||| |||||||| |||
Sbjct 1335 ATCTTAATGTTCACGACTTTAAA-CAACTCAAGTCA 1369
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 75.0 bits (40), Expect = 1e-12
Identities = 87/108 (81%), Gaps = 10/108 (9%)
Strand=Plus/Plus
Query 363 GGGATATGCATCAATGGGGTTTTGTATTACTTAGCACA-ATATATCGATGA-ACGAAATC 420
|||||||||||||||||||||||||||| |||||| | | | || || | | || ||
Sbjct 598 GGGATATGCATCAATGGGGTTTTGTATTTCTTAGCTGAGAGAAAT-GA-GCTA-GAG-TC 653
Query 421 ATATATGTTATATGATAGTTTGCCTTGATGTTAGGTCCGAGAAATTCA 468
| || | || ||||||||||| ||||||||||||| ||||||||||
Sbjct 654 -TG-AT-T-ATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 697
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 47621971356
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5