BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg922207

Length=584
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G20380.1 | Symbols:  | Prolyl oligopeptidase family protein ...   372    2e-102


> AT1G20380.1 | Symbols:  | Prolyl oligopeptidase family protein 
| chr1:7061665-7065178 FORWARD LENGTH=2327
Length=2327

 Score =  372 bits (201),  Expect = 2e-102
 Identities = 228/241 (95%), Gaps = 1/241 (0%)
 Strand=Plus/Plus

Query  1     TATGGAGGGTTTAGC-TAAGCATGACTCGGTTTTTCAGCGCGACTCGTATTGTGCTTAGT  59
             ||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||| ||
Sbjct  1459  TATGGAGGGTTTAGCATAAGCATGACGCCGTTTTTCAGCGCGACCCGTATTGTGCTTGGT  1518

Query  60    AGGCATCTTGGTACCGTGTTCTGTTTTGCAAACATCCATGGTGGTGGTGAGTATGGTGAG  119
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  1519  AGGCATCTTGGTACCGTGTTCTGTTTTGCAAACATCCGTGGTGGTGGTGAGTATGGTGAG  1578

Query  120   GAATGGCATAAATCTGGCGCTCTAGCCAATAAGCAGAATTGCTTCGATGATTTCATTTCC  179
             ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct  1579  GAATGGCATAAATCTGGTGCTCTTGCCAATAAGCAGAATTGCTTCGATGATTTCATCTCC  1638

Query  180   GGGGCTGAGTATCTGGTTTCTGCTGATTATACACAACCGAGAAAAATTTGTATCGAAGGT  239
             |||||||||||||||||||| |||| ||||||||||||||| ||| ||||||||||||||
Sbjct  1639  GGGGCTGAGTATCTGGTTTCAGCTGGTTATACACAACCGAGGAAACTTTGTATCGAAGGT  1698

Query  240   G  240
             |
Sbjct  1699  G  1699


 Score =  357 bits (193),  Expect = 7e-98
 Identities = 207/214 (97%), Gaps = 0/214 (0%)
 Strand=Plus/Plus

Query  258   AAGTTTACCATAAGACATGCTTGGACTTCTGAATTTGGTTGTTCTGACAAGGAAGAGGAG  317
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1804  AAGTTTACCATAGGACATGCTTGGACTTCTGAATTTGGTTGTTCTGACAAGGAAGAGGAG  1863

Query  318   TTCCATTGGCTGATAAAGTATTCGCCTCTGCATAATGTGAAGAGGCCTTGGGAACAGAAG  377
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  1864  TTCCATTGGCTGATAAAGTATTCGCCTCTGCATAATGTGAAGAGGCCATGGGAACAGAAG  1923

Query  378   ACAGATCGGTTTGTTCAGTACCCATCAACCATGTTGTTAACTGCTGATCACGACGATAGA  437
             ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  1924  ACAGATCTGTTTTTTCAGTACCCATCAACCATGTTGTTAACTGCTGATCATGACGATAGA  1983

Query  438   GTCGTGCCACTTCATACTTACAAGTTGCTTGCGA  471
             ||||| ||||||||| ||||||||||||||||||
Sbjct  1984  GTCGTCCCACTTCATTCTTACAAGTTGCTTGCGA  2017


 Score =  141 bits (76),  Expect = 7e-33
 Identities = 80/82 (98%), Gaps = 0/82 (0%)
 Strand=Plus/Plus

Query  470   GAATAGTCCACAGACGAACCCTATAATTGCTCGAATAGAAGTAAAAGCCGGGCATGGAGC  529
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2049  GAATAGTCCACAGACGAACCCTATAATTGCTCGAATAGAAGTAAAAGCCGGGCATGGAGC  2108

Query  530   AGGGCGTCCAACGCAAAATATG  551
             ||| |||||||||||||| |||
Sbjct  2109  AGGACGTCCAACGCAAAAGATG  2130



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 28080888173


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5