BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922218
Length=959
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42430.1 | Symbols: | F-box and associated interaction doma... 353 1e-96
AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 329 2e-89
AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-1101... 263 2e-69
AT1G33020.1 | Symbols: | F-box and associated interaction doma... 259 3e-68
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 246 3e-64
AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 191 1e-47
AT1G33010.1 | Symbols: | F-box and associated interaction doma... 124 1e-27
> AT5G42430.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16971312-16972499 REVERSE LENGTH=1188
Length=1188
Score = 353 bits (191), Expect = 1e-96
Identities = 668/886 (75%), Gaps = 81/886 (9%)
Strand=Plus/Plus
Query 19 GATTGTCATATGAAGTTCTCTAAAGACATAAGCCCATACAATTGTACCTATGCTTCTGGT 78
|||| ||||| |||||||||| || || || | ||| ||||| |||| ||||||||
Sbjct 274 GATTTTCATACGAAGTTCTCT-----CA-AAACCTAAACATTTGTAACTATACTTCTGGT 327
Query 79 TTGATCTATTT-TCAT--AATATGGAT-A-ATGATGCAGTACGTGTGATATGTAACCCTA 133
||| | ||||| || | || ||||| | | | |||| | ||| |||||||||||||
Sbjct 328 TTGGTATATTTCTC-TGCTATGTGGATCACA-AAGGCAG-A--TGTCATATGTAACCCTA 382
Query 134 GCACAGGACAGTATGCGATCTTACCTCTACCTGAAAGGAGAACGTACAGAAATTCTG-TT 192
|||| ||||| |||||||| |||||| | || | | ||||| || | | |
Sbjct 383 GCACGGGACATTATGCGATGTTACCT-AAATTG-TTGTTG-ACGTATGGAGAGAC-GAGA 438
Query 193 AGCTATTTAGGGTTTGATCCGATAGACAACG-AATTCAAGGTATTGTTCCTGAATACTAG 251
|||| ||| |||||||||| | | ||| | |||||||||||||| || |||||| ||
Sbjct 439 AGCTTTTTTTTGTTTGATCCGGTTGGCAA-GCAATTCAAGGTATTGCTCATGAATA--AG 495
Query 252 -TAAATCTATCGCTTCTAGTGATATA-GATCATT-ATATTTTGACACTAGGAACTGGGAA 308
|||| | | | | | | | | || |||| ||||||||||| | |||||| | ||
Sbjct 496 ATAAA-C-A---ATAAT-GAAACAAAGGA-CATTCATATTTTGACATTGGGAACTAGAAA 548
Query 309 ATTGAGGTGGAGGAAGAT---TCAGTGTCCTTTTACCCATGAGCCTTT-GTGGGAAAGGA 364
| |||| ||||||||||| || || || || | |||| | ||| | ||| |||
Sbjct 549 AGTGAGATGGAGGAAGATCCAACAATGCCCCTTGATCCAT-ATTGTTTCGCATGAATGGA 607
Query 365 TATGCATCAATGGGGTTTTGTATTACTTAGCTCAT-TC--TGAAAGAAAGTATTATGCG- 420
||||||||||||||| |||||||||| ||||| || | || | | | | || | |
Sbjct 608 TATGCATCAATGGGGCTTTGTATTACATAGCTTATAACATTG-ATG-ATTTCTT-GGGGT 664
Query 421 -T-TAGTTTGCTTTGATGTTAGATCTGAGAAATTC-AA-GCTCATTGAAT-T--A-GAAT 472
| |||||||||||||||| || || ||||||||| || | || | ||| | | ||
Sbjct 665 ATATAGTTTGCTTTGATGTCAGGTCCGAGAAATTCAAATG-TC--TAAATCTAAACCAAG 721
Query 473 ATC-GTTTGGAT-TG-CCGTCTTTA-TGAACTGATAAACTATAAGGGTAAATTATGTGGG 528
| | |||| | || || | || | || ||||| ||||||| ||||||||| ||| |
Sbjct 722 A-CTGTTT--TTCTGAACG-ATCTACTAAATTGATATACTATAAAGGTAAATTAGGTGTG 777
Query 529 GTTAATTTGAAGTATGCTTATGGTGGTGGATTTCCCCTTGAGTTACGTATGTGGGTTCTA 588
|||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||
Sbjct 778 GTTAATTTGAAGTATGCTCATGGCGGTGGATTTCCCCTTAAGTTATGTATGTGGGTTCTA 837
Query 589 GAGGATGTCGAGAAAGAGGAATGGACGTCATATGCCTACACTTTGAGGGATGAGAATAAA 648
|||||||| |||||| |||||||||| ||| || |||||||||||||||||| ||| |
Sbjct 838 GAGGATGTGGAGAAACAGGAATGGACAACATCTGTGTACACTTTGAGGGATGAGGATAGA 897
Query 649 GTCTTTAAGGTTAACTACAATCTTTCCGTTGTTGGGGTGACTGCTTCAGGTGAAATTGTT 708
||| |||||||| ||||| |||||| |||||||| | |||||| ||||||||||||||
Sbjct 898 GTCGTTAAGGTTTACTACGATCTTTTTATTGTTGGGATAACTGCTACAGGTGAAATTGTT 957
Query 709 TTGGTGAACCATAATACATCTAAACCGTTATATGTTTTCTACTTTAATCCCAAAAGGAAC 768
|||| ||| | || || ||| ||||| ||||| ||||||||||||| | ||||||||
Sbjct 958 TTGGCGAAGAAAAAGGTATGTAAGCCGTTTTATGTCTTCTACTTTAATCTCGAAAGGAAC 1017
Query 769 ACTTTCCAAAATGTTGAAATCCAAAGTTTTGGAGCTAAGGGTGAAGCGTTTAAGACTAGT 828
||| ||| || ||||||||||||| ||||||||| || | | | ||| || ||
Sbjct 1018 ACTCTCCTAAGTGTTGAAATCCAAGGTTTTGGAG--AA---T--A-C--CAAAG-CT-GT 1065
Query 829 T-TCCTAGTTGACGCCTTTGTAGACCATGTAGAGGATCTTAA-GTT 872
| | | ||| ||||||||||||||||||||||||||||||| |||
Sbjct 1066 TGTAGT-GTTCACGCCTTTGTAGACCATGTAGAGGATCTTAATGTT 1110
> AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899
FORWARD LENGTH=1068
Length=1068
Score = 329 bits (178), Expect = 2e-89
Identities = 493/636 (78%), Gaps = 57/636 (9%)
Strand=Plus/Plus
Query 284 ATATTTTGACACTAGGAACTGGGAAAT-TGAGGTGGAGGAAGATTCA-GTGT-CCTTTTA 340
||||| ||||| |||||||| | |||| ||||||||||| ||||| | ||| ||||||
Sbjct 320 ATATTCTGACATTAGGAACT-GAAAATGTGAGGTGGAGGGAGATT-ATATGTCCCTTTT- 376
Query 341 CCCATGAGCCTTTGT-GGG-AAAG--GATATGCATCAATGGGGTTTTGTATTAC-TTAGC 395
| |||| || | | ||| |||| |||||||||||||||||||||||||||| | ||
Sbjct 377 CATATGATCC-TCCTCGGGAAAAGCCGATATGCATCAATGGGGTTTTGTATTACATAAG- 434
Query 396 TCATTCTGAAAGAAAGTATTATGCGT-TAGTTTGCTTTGATGTTAGATCTGAGAAATTCA 454
| || | || | |||| | | ||| ||||||||||||||| |||||||||||||
Sbjct 435 T--GTC-GGTAGTTATTATT-CACTTATAGGTTGCTTTGATGTTAGGTCTGAGAAATTCA 490
Query 455 AGCTCATTGA-AT-T-AG--AATATCG-TTT--GGATTGCCGTCTTTATGAACTGATAAA 506
|| | || | || | || | || | ||| | || |||| | || |||||||
Sbjct 491 AG-T-TTTTATATCTAAGCCCAGATTGCTTTCCAAACTG--GTCTAGA-AAATTGATAAA 545
Query 507 CTATAAGGGTAAATTATGTG-GGGT-TAATTTGAAGTATGCTTATGGTGGTGGATTTCCC 564
|||||||||||||||| ||| | | ||| | |||| | |||| |||||||||||||
Sbjct 546 CTATAAGGGTAAATTAGGTGTGACTATAA-TGGAAG-A---TTATCATGGTGGATTTCCC 600
Query 565 CTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTCATATGCC 624
||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 601 CTTAAGTTGCGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGAGATATGCC 660
Query 625 TACACTTTGAGGGATGAGAATAAAGTCTTTAAGGTTAACT-ACAATCTTTCCGTTGTTGG 683
|||||||||||| ||||||||||||| | || || | || || | | ||||||||
Sbjct 661 TACACTTTGAGGCCTGAGAATAAAGTCG--A-GGACAA-TGACTATGTATATGTTGTTGG 716
Query 684 GGTGACTGCTTCAGGTGAAATTGTTTTGGTGAACCATAATACATCTAAACCGTTATATGT 743
|| |||||||||||||||||||||||| ||| || ||| ||| ||||||||| |||||
Sbjct 717 GGCAACTGCTTCAGGTGAAATTGTTTTGACGAAACAGAATGCATATAAACCGTTTTATGT 776
Query 744 TTTCTACTTTAATCCCAAAAGGAACACTTTCCAAAATGTTGAAATCCAAAGTTTTGGAGC 803
||||||||||| ||| ||||||||||| ||| || |||||||||||| || ||||||
Sbjct 777 TTTCTACTTTAGTCCTGAAAGGAACACTCTCCTAAGCGTTGAAATCCAAGGTGTTGGAG- 835
Query 804 TAAGGGTGAAGCGTTTAAGACTAGT-TTCCTAGTTGACGCCTTTGTAGACCATGTAGAGG 862
||| || | |||| | || | || || | || |||||||||||||| ||||
Sbjct 836 -AAGAATG--GT-TTTATCA-TAATGTT--TACT--AC---TTTGTAGACCATGTCGAGG 883
Query 863 ATCTTAAGTTCGATATTAAGACGACAACATACGCTG 898
|||||| ||| ||| ||| || ||||||||| ||||
Sbjct 884 ATCTTAGGTTTGATGTTATGAAGACAACATATGCTG 919
> AT1G30925.1 | Symbols: | phospholipase Cs | chr1:11009888-11011792
REVERSE LENGTH=1125
Length=1125
Score = 263 bits (142), Expect = 2e-69
Identities = 304/379 (80%), Gaps = 24/379 (6%)
Strand=Plus/Plus
Query 500 TGATAAACTATAAGGGTAAATTATGTGGGGTTAATTTGAAGTATGCTTATGGTGGTGGAT 559
|||||||||||||||||||| || ||| | ||||||||| | |||| |||| ||| ||
Sbjct 749 TGATAAACTATAAGGGTAAAGTAGGTGTGATTAATTTGACGCATGCCTATGAACGTGTAT 808
Query 560 TTCCCCTTGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTCAT 619
|||||||| ||||||||||| ||||||||||||| | |||||| |||||||| || |||
Sbjct 809 TTCCCCTTCAGTTACGTATGACGGTTCTAGAGGATTTTGAGAAACAGGAATGGTCGACAT 868
Query 620 ATGCCTACACTTTGAGGGATGAGAATAAAGTCTTTAAGGTTAACTACAATCTTTCCGTTG 679
||| ||||||||||| || |||||||| |||| ||||| | || ||||||| |
Sbjct 869 ATGTCTACACTTTGATGGCTGAGAATATAGTC------GTTAAGT---ATGTTTCCGTGG 919
Query 680 TTGGGGTGACTGCTTCAGGTGAAATTGTTTTGGTG-AACCATAATACAT-CTAAACCGTT 737
||||| |||||||| ||||||| |||||||||||| || || ||| ||| | ||||||||
Sbjct 920 TTGGGATGACTGCTACAGGTGATATTGTTTTGGTGAAAACA-AATGCATGC-AAACCGTT 977
Query 738 ATATGTTTTCTACTTTAATCCCAAAAGGAACACTTTCCAAAATGTTGAAATCCAAAGTTT 797
||||| ||||||||||||||| |||||||||| ||| || ||||||||||||| || |
Sbjct 978 TTATGTGTTCTACTTTAATCCCGGAAGGAACACTCTCCTAAGTGTTGAAATCCAAGGTGT 1037
Query 798 TGGAGCTAAG-GGTGAAGCGTTTAAGACTAGTTTCCT--AG-TTGACGCCTTTGTAGACC 853
||||| ||| || | | | || |||| | || ||| ||||||||||||||
Sbjct 1038 TGGAG--AAGACCACAAATGCCTCA-AC---TTTCATACAGTTTG-CGCCTTTGTAGACC 1090
Query 854 ATGTAGAGGATCTTAAGTT 872
|||||||||||||| ||||
Sbjct 1091 ATGTAGAGGATCTTCAGTT 1109
> AT1G33020.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:11962746-11964832 FORWARD LENGTH=1647
Length=1647
Score = 259 bits (140), Expect = 3e-68
Identities = 673/915 (74%), Gaps = 98/915 (11%)
Strand=Plus/Plus
Query 19 GATTGTCATATGAAGTTCTCTAAAGACATAAGCCCATACAATTGTACCTATGCTTCTGGT 78
|||| ||||||||| |||||| ||||||| || | || | ||||| |||| |||||||
Sbjct 286 GATTTTCATATGAACTTCTCTGGAGACATACGCAGAAACGAGTGTACATATGTTTCTGGT 345
Query 79 TTGATCTATTTTCATA-ATA-TGGAT----AATGA----TG-CA-GTACGTGTGATATGT 126
|| |||||||| | || | | |||| ||| | || | | ||||||||||||
Sbjct 346 TTCATCTATTTCCCTAGAAAGCGGATCAAAAATTATTTGTGTGATTTCCGTGTGATATGT 405
Query 127 AACCCTAGCACAGGACAGTATGCGATCTTACCTCTACCTGA-AAGGAGAACGTACAGA-A 184
||||||| ||| ||||| |||||||||||| | | |||| || | | || || |
Sbjct 406 AACCCTATCACGGGACAATATGCGATCTTA---C-AACTGATAA-CA-TTC-CAC-GAGA 457
Query 185 ATTCTGTTAGCTATTTAGGGTTTGATCCGATAGACAACG-AATTCAAGGTATTGTTCCTG 243
| | |||| |||||||||||||||||| ||||| | |||||||||||||| | ||
Sbjct 458 A--GAG-AAGCTTTTTAGGGTTTGATCCGATTGACAA-GCAATTCAAGGTATTGCGCATG 513
Query 244 AATACTAGTAAATCTATCGCTTCTAGTGATATAGATCATTATATTTTGACACTAGGAA-C 302
|| | || | ||| |||| | || || | | | ||| ||||| ||||| || ||| |
Sbjct 514 AA-A-TA-T-AAT-GATCG-TGGTATTG-T-T-GTTCACCATATTCTGACATTA-GAACC 563
Query 303 TGGGAAATTGAGGTGGAGGAAGATTCAG-TGTCCTTTTA-CCCATGAGCCTTTGTGGGAA 360
||| ||| ||||||||| ||| | || | ||||| ||| ||||||| ||||| |||| |
Sbjct 564 TGGCAAAATGAGGTGGA-GAAAAATCCGATGTCC-CTTAGCCCATGAACCTTTCTGGG-A 620
Query 361 AG-GATATGCATCAATGGGGTTTTGTATTACTTAGCT----CATTCTGAAAGAAAGTATT 415
|| ||||||| ||||||||||||||||||||||||| || |||| || || ||
Sbjct 621 AGAGATATGCGCCAATGGGGTTTTGTATTACTTAGCTGAACCA-ACTGATGGAGGGTCTT 679
Query 416 ATGCGTTAGT-TTGCTTTGATGTTAGATCTGAGAAATTCAAGCTCATTGAATTAGAATAT 474
||| | || | ||||||||||||| | |||||||||||||| | ||||| | || ||
Sbjct 680 ATGTGATA-TGTTGCTTTGATGTTCGGTCTGAGAAATTCAAATTTATTGACGCA-AA-AT 736
Query 475 CG-TTT-G-GATTGCCGTCTTTATGAACTGATAAACTATAAGGGTAAATTATGTGGGGTT 531
| ||| | |||| | ||| | | || |||| || |||||||||||| || ||||| ||
Sbjct 737 -GCTTTGGTGATT-TC-TCTAT-TCAATTGATCAATTATAAGGGTAAACTAGGTGGGATT 792
Query 532 AATTTGAAGTATGCTTATGGT-GGTGG--A-TTTCCCCTTGAGTTACGTATGTGGGTTCT 587
| || |||||||| || || | ||| | | || ||||||| ||||||||||||
Sbjct 793 AGTTGGAAGTATG-ATACCGTCGATGGAAAGCGTACCGTTGAGTTGTATATGTGGGTTCT 851
Query 588 AGAGGATGTCGAGAAAGAGGAATGGACGTCATATGCCTACACTTTGAGGGATGAGAATAA 647
|||||||||||||||| || ||||| | ||| | |||| ||||| || | ||||
Sbjct 852 AGAGGATGTCGAGAAACAGAAATGGTCCAAATACGTCTACCCTTTGCCGG--G-GAAT-- 906
Query 648 AGTCTTTAAGGTTAACTACAATCTTTCCGTTGTTGGGGTGACTGCTTCAGGTGAAATTGT 707
|| | | | || | || |||||| || ||||| ||| |||||| |||||
Sbjct 907 --TCCT-A-------C--CATTATT-CCGTTGCAGGAGTGACAGCTAAAGGTGATATTGT 953
Query 708 TTTGGTGAAC-CATAATACATCTAAACCGTTATATGTTTTCTACTTTAATCCC-AAAAGG 765
||| || || | || |||||||||||||| |||||||||||| | |||||| |||||
Sbjct 954 TTTTGTCAAGACTTAC-ACATCTAAACCGTTTTATGTTTTCTACGTAAATCCCGAAAAGA 1012
Query 766 AACACTTTCCAAAATGTTGAAATCCAAAGTTTTGGAGCTAAGGGTGAAGCGTTTAAGACT 825
|| ||||||||| ||||||||||| | || ||| ||||| |||| | |||
Sbjct 1013 AA-ACTTTCCAACGCGTTGAAATCCA---T---GG---TAACCATGAAGTGTTTGACACT 1062
Query 826 AGTT-TCCTAGTTGACGCCTTTGTAGACCATGTAGAGGATCTTAAGTTCGATATTAAGAC 884
| | || ||||| ||||||| ||||||||||||||||||||| |||| ||| ||| ||
Sbjct 1063 AATAATC-TAGTTTACGCCTTCGTAGACCATGTAGAGGATCTTCAGTTTGATGTTATGAA 1121
Query 885 GACAACATACGCTGC 899
|| |||||| |||||
Sbjct 1122 GAAAACATATGCTGC 1136
> AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444
REVERSE LENGTH=1203
Length=1203
Score = 246 bits (133), Expect = 3e-64
Identities = 322/409 (79%), Gaps = 30/409 (7%)
Strand=Plus/Plus
Query 503 TAAACTATAAGGGTAAATTATGTGGGGTTAATTTGA-AGTATGCTT-ATGGTGGTGGATT 560
|||||||||||||||||||| | | |||| | | |||||| || ||| |||||| ||
Sbjct 779 TAAACTATAAGGGTAAATTAGGCATGATTAA-TCAAGAGTATG-TTGATGATGGTGGTTT 836
Query 561 TCCCCTTGAGTTACGTATGTGGGTTCTAGAGGATGTC-GAGAAAGAGGAATGGACGTCAT 619
|||||| ||||| || |||||||||||||||||||| || ||||| |||||| || |||
Sbjct 837 TCCCCTAAAGTTAAGTGTGTGGGTTCTAGAGGATGTCGGA-AAAGAAGAATGGTCGACAT 895
Query 620 ATGCCTACACTTTGAGGGATGAGAATAAAGTCTTTAAGGTTAACTACAATCTTTCCGTTG 679
||| |||||||||||||||||| ||||||||| | ||||||| || ||||| |||||||
Sbjct 896 ATGTCTACACTTTGAGGGATGATAATAAAGTCGATCAGGTTAAATATAATCTCTCCGTTG 955
Query 680 TTGGGGTGACTGCTTCAGGTGAAATTGTTTTGGTGAACCATAAT-A--CATCTAAA-CCG 735
||||||||||||||||||||||||||||||||||||| | | | | || || || ||
Sbjct 956 TTGGGGTGACTGCTTCAGGTGAAATTGTTTTGGTGAAGAAGACTCAAACA-CTTAAGCCA 1014
Query 736 TTATATGTTTTCTACTTTAATCCC-A-AAAGGAACACTTTCCAAAATGTTGAAATCCAAA 793
|| |||||||| |||||||| ||| | ||| || ||| || || ||||||| || |||
Sbjct 1015 TTTTATGTTTTATACTTTAACCCCGACAAA--AATACTCTCTTAACTGTTGAAGTC-AAA 1071
Query 794 GTTTTGGAGCTAAGGGTGAAGCGTTTAAGACTAGTTTC-CTAG--TTGACGCCTTTGTAG 850
| | | | ||| || || | | | || | | || || ||||||||||||
Sbjct 1072 GGACTACACC---GGG-GATT-GTAT--GCC--GTA-CAC-AGAATTTACGCCTTTGTAG 1120
Query 851 ACCATGTAGAGGATCTTAAGTTCGATATTAAGACGACAACATACGCTGC 899
||||||||||||||||| |||| |||||| || ||||||||| |||||
Sbjct 1121 ACCATGTAGAGGATCTTGAGTTTAATATTATGAAGACAACATATGCTGC 1169
> AT1G30945.1 | Symbols: | pseudogene, hypothetical protein |
chr1:11026338-11026784 REVERSE LENGTH=447
Length=447
Score = 191 bits (103), Expect = 1e-47
Identities = 346/456 (76%), Gaps = 45/456 (10%)
Strand=Plus/Plus
Query 344 ATGAGCCTTTGTGGGAAAG-GATATGCATCAATGGGGTTTTGTATTACT-TAGCTCA-TT 400
|||| ||||| | |||||| ||||||||||||||||||||||||||||| | ||| | ||
Sbjct 1 ATGAACCTTT-TTGGAAAGAGATATGCATCAATGGGGTTTTGTATTACTCTGGCT-AGTT 58
Query 401 ---CTGAAAGAAAGTATTATGCGTTAGTTTGC-TTTGATGTTAGATCTGAGAAATTCAA- 455
|| | || | | || | | |||||| | |||||| |||| ||||||||||||||
Sbjct 59 CAGCTCATGGATA-TCTTCT--GATAGTTT-CTTTTGATTTTAGGTCTGAGAAATTCAAT 114
Query 456 --GCTCATTGAAT-TAGAATATCGTTTGGATTGCCGTCTTTATGAACTGATAAACTATAA 512
||| || || || | || ||| || | ||| | || |||||||||| ||
Sbjct 115 TTTATCAATGCATCAAG-CT-TCCTTT---TT-TCATCTACA-AAATTGATAAACTACAA 167
Query 513 GGGTAAATTATGTGGGGTTAATTTGAAGTATGCTTATGGTGGTGGATTTCCCCTTGAGTT 572
||||||||| ||||| || ||||| |||| | ||||||||| || |||| |||||||
Sbjct 168 AGGTAAATTAGGTGGGATTGATTTGGCGTATAATCATGGTGGTGTATATCCCGTTGAGTT 227
Query 573 ACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTCATATGCCTACACTTT 632
||||||||||||||||||||||||||||||| | |||||| || | ||| ||| ||||
Sbjct 228 ACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGAGACATGTTTACTCTTT 287
Query 633 GAGGGATGAGAATA-AAGTCTTTA--AG-GTTAACTACAATCTTTCCGTTGTTGGGGTGA 688
| ||| || || || | || | || || ||||||||| ||| ||||| |||| |||
Sbjct 288 GCCGGA-GACCATTGAA-T-TTCAGCAGTGT-AACTACAATATTTGCGTTGGTGGGATGA 343
Query 689 CTGCT-TCAGGTGAAATTGTTTTGGT-GAAC-CATA-ATA-C-A--TCTAAACCGTTATA 740
|||| | ||||||||||||||| | | | |||| ||| | | || |||||||| ||
Sbjct 344 ATGCTAT-AGGTGAAATTGTTTTT-TCGGAGTCATATATATCTACATCCAAACCGTTTTA 401
Query 741 TGTTTTCTACTTTAATCCC-AAAAGGAA--CACTTT 773
|||||||||||| |||||| ||||| || ||||||
Sbjct 402 TGTTTTCTACTTCAATCCCGAAAAGAAAAACACTTT 437
> AT1G33010.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:11959287-11960591 FORWARD LENGTH=1086
Length=1086
Score = 124 bits (67), Expect = 1e-27
Identities = 304/411 (74%), Gaps = 46/411 (11%)
Strand=Plus/Plus
Query 500 TGATAAACTATAAGGGTAAATTATGTGGGGTTAATTTGAAGT-ATGCTTATGGTGGTGGA 558
||||||||||||||||||||||| ||||| ||| || ||| | || | || | ||| |
Sbjct 542 TGATAAACTATAAGGGTAAATTAGGTGGGATTAGTTGGAA-TAAT-C--AT-GAGGTTG- 595
Query 559 TTTCCCCTTGAGTT-ACGTATGTGGGTTCTAGAGGATGTCGAGAAAGAGGAATGGACGTC 617
|||| ||||||| | ||||||||||||||| |||||||||||| | |||||| |
Sbjct 596 -CTCCCGTTGAGTTGTC-TATGTGGGTTCTAGAAGATGTCGAGAAACAAGAATGGTCCAA 653
Query 618 ATATGCCTACACTTTGAGGGATGAGAATAAAGTCTTTAAGGTTAACTACAATCTTTC-CG 676
| ||| ||||| ||| | | ||||| |||| ||| ||||| || | ||
Sbjct 654 AAATGTCTACA-TTT--TGCCTAAGAATGTAGTCCCTAA---TAACT----GGTTGCACG 703
Query 677 TTGTTGGGGTGACTGCTT-CAGGTGAAATTG-TTT-T-GGTGAACCATAATACATCTAAA 732
|| ||| ||||||| || |||||| |||| ||| | || | | || | ||| ||
Sbjct 704 CTGCTGGAGTGACTG-TTGAAGGTGATATTGTTTTCTCGGAG-GCTGTAGT--ATCCAAT 759
Query 733 CCGTTAT-ATGTTTTCTACTTTAATCCC-AAAAGGAACACTTTCCAAAATGTTGAAATCC 790
||||| | |||||||||||||||||||| |||| ||||||| ||||| | ||||||| ||
Sbjct 760 CCGTT-TGATGTTTTCTACTTTAATCCCGAAAA-GAACACTCTCCAACACGTTGAAA-CC 816
Query 791 AAAGTTTTGGAGCTAAGGGTGAAGCGTTT-AAGACT-AGTTTCCTAGTTGACGCCTTTGT 848
| || | ||| ||||| |||| | || | || | |||||| || ||||||
Sbjct 817 -CA---TT---G-TAACCATGAAGTGTTTGACGA-TGAGAAT-CTAGTTAACATCTTTGT 866
Query 849 AGACCATGTAGAGGATCTTAAGTTCGATATTAAGACGACAACATACGCTGC 899
|||||||||||||||||||||||| ||| ||| || | ||||||| |||||
Sbjct 867 AGACCATGTAGAGGATCTTAAGTTTGATGTTATGAAGCCAACATATGCTGC 917
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46918693298
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5