BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922235
Length=2038
Score E
Sequences producing significant alignments: (Bits) Value
AT1G31710.1 | Symbols: | Copper amine oxidase family protein |... 2244 0.0
AT1G31690.1 | Symbols: | Copper amine oxidase family protein |... 1393 0.0
AT1G31670.1 | Symbols: | Copper amine oxidase family protein |... 468 1e-130
> AT1G31710.1 | Symbols: | Copper amine oxidase family protein
| chr1:11349840-11355486 FORWARD LENGTH=2208
Length=2208
Score = 2244 bits (1215), Expect = 0.0
Identities = 1402/1492 (94%), Gaps = 13/1492 (1%)
Strand=Plus/Plus
Query 552 ACCTATTGAAGGAATGACGATAATCGTTAATCTTGACGAGATGAAGGTAACGGAGTTTAA 611
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 600 ACCTATTGAAGGAATGACGATAATCGTTAATCTTGATGAGATGAAGGTATCGGAGTTTAA 659
Query 612 GGACAGGTCAATGGTTACTATGCCCA-AGGCTAACGGAACGGAGTACCGTATCTCGAAGA 670
|||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 660 GGACAGGTCAGTGGTTACTATGCCCATA-GCTAACGGAACGGAGTACCGTATCTCGAAGC 718
Query 671 TGAACCCTCCGTTTGGGCCAACGCTTCACAACGCCGTTCTCTTGCAGCCGGATGGTCCAG 730
| ||||| || ||||| || |||||||| |||||||| || ||||||||||||||||| |
Sbjct 719 TTAACCCACCCTTTGGACCGACGCTTCATAACGCCGTCCTTTTGCAGCCGGATGGTCC-G 777
Query 731 GG-TTCAAGATCGATGGACACATTGTGAGTATGTGGGCAAATTGGGAATTTCACATATCG 789
|| |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 778 GGCTTCAAGGTCGATGGACACATCGTGAG---GTGGGCAAATTGGGAATTTCACATATCG 834
Query 790 TTTGACGTTCGAGCCGGTATCGTCATCTCTCTTGCATCACTTTTCGACACGGACGTGAAC 849
|| || |||||||| || |||||||| ||||| ||||| |||||||||||||||||||||
Sbjct 835 TTCGATGTTCGAGCTGGCATCGTCATATCTCTCGCATCCCTTTTCGACACGGACGTGAAC 894
Query 850 AAATACCGGCAAGTCCTATACAAAGGTCACTTGTCGGAAATGTTCATACCTTACATGGAC 909
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 895 AAATACCGGCAAGTCCTATATAAAGGTCACTTATCGGAAATGTTCATACCTTACATGGAC 954
Query 910 CCAAGTGATGATTGGTATTTCATTACTTATCTTGATTGTGGCGATTTCGGCTGCGGTCAA 969
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 955 CCAAGTGATGATTGGTATTTCATTACTTATCTTGATTGTGGCGATTTTGGCTGCGGTCAA 1014
Query 970 TGCGCCGTGTCTCCTCAGCCGTACACTGATTGTCCAGCGGGTGCAGTTTTCATGGATGGT 1029
|||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1015 TGCGCCGTATCTCTTCAACCGTACACTGATTGTCCAGCGGGTGCAGTTTTTATGGATGGT 1074
Query 1030 ATTTTTGCTGGTCAAGATGGAACTCCCGCAAAAATCCCAAAAGTTATGTGCATTTTTGAA 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 ATTTTTGCTGGTCAAGATGGAACTCCCGCAAAAATCCCAAAAGTTATGTGCATTTTTGAA 1134
Query 1090 AAATATGCTGGAGATATCATGTGGCGACATACAGAAGCTGAAATCCCGAACTTAGAAATT 1149
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1135 AAATATGCTGGAGATATCATGTGGCGACATACAGAAGCTGAAATTCCAAACTTAGAAATT 1194
Query 1150 ACGGAGGTTAGACCAGACGTAAGTCTTGTAGCCCGGATCGTAACGACCGTGGGGAACTAC 1209
|||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 1195 ACGGAGGTTAGACCGGACGTAAGTCTTGTAGCCCGGATTGTGACGACCGTGGGAAACTAT 1254
Query 1210 GACTACATAGTTGATTACGAGTTCAAGCCTAGTGGTTCCATCAAGATGGGGGTCGGCTTA 1269
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1255 GACTACATAGTTGATTATGAGTTCAAGCCTAGTGGTTCCATCAAAATGGGGGTCGGCTTA 1314
Query 1270 ACCGGTGTTTTAGAAGTAAAACCAGCAGAATATATTCACACATCAGAAATCAAAGTAGGG 1329
||||||||||||||||| ||||| | |||||||||||||||||| ||||||||| |||||
Sbjct 1315 ACCGGTGTTTTAGAAGTGAAACCGGTAGAATATATTCACACATCCGAAATCAAACTAGGG 1374
Query 1330 GAGGACATACACGGTACAATTGTGGCCGACAATACCGTTGGTGTTAACCACGACCGTTTT 1389
|| ||||||||||| |||||||| |||||||| ||||| |||||||||||||||| |||
Sbjct 1375 GAAGACATACACGGGACAATTGTCGCCGACAACACCGTCGGTGTTAACCACGACCATTTC 1434
Query 1390 GTAACATTCCGTCTTGATCTTGACATTGATGGTACCGAAAATTCCTTTGTTCGTAACGAA 1449
|| |||||||||||| |||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1435 GTGACATTCCGTCTTCATCTTGACATCGACGGTACCGAAAATTCCTTTGTTCGTAACGAA 1494
Query 1450 CGTGTGACCACGAGGACTCCAAAATCTGTTAACACACCGAGAAAAACCTACTGGACAACG 1509
| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1495 CTTGTGACCACGAGGTCTCCAAAATCTGTTAACACACCGAGAAAAACCTATTGGACAACG 1554
Query 1510 AAGCCAAAGACGGCCAAGACCGAGGCAGAAGCTCGGGTGAAAATAGGCTTGAAAGCGGAG 1569
||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||
Sbjct 1555 AAGCCAAAGACGGCCAAGACCGAGGCAGAGGCTCGGGTGAAACTAGGTTTGAAGGCGGAG 1614
Query 1570 GAGCTGGTGGTGGTTAACCCTAACCGAAAAACGAAGCATGGCAATGAGGTTGGATACCGT 1629
||| | || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1615 GAGTTAGTTGTGGTTAACCCTAACCGAAAGACGAAGCATGGCAATGAGGTTGGATACCGT 1674
Query 1630 TTACTTCATGGATCCGCCGCAGGCCCACTTCTGGCTCCA-GATGATTACCCGCAGATTCG 1688
||||||||||||||||| ||||||||||| ||||| ||| ||||||| ||||||||||||
Sbjct 1675 TTACTTCATGGATCCGCTGCAGGCCCACTCCTGGC-CCAAGATGATTTCCCGCAGATTCG 1733
Query 1689 AGCTGCATTCACCAACTATAACGTGTGGATCACGCCGTATAACAGGTCGGAGGTTTGGGC 1748
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1734 AGCTGCATTCACCAACTATAACGTGTGGATCACGCCGTATAACAGGTCAGAGGTTTGGGC 1793
Query 1749 AGGTGGTTTGTACGCTGACAGGAGCCAAGGCGACGATACGTTGGCCGTGTGGTCTCAAAG 1808
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1794 AGGTGGTTTGTACGCTGACAGGAGCCAAGGCGACGATACGTTGGCAGTGTGGTCTCAAAG 1853
Query 1809 GAATAGAAAAATAGAGAAGAAAGATATAGTGATGTGGTACACCGTCGGTTTCCACCATGT 1868
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1854 GAATAGAAAAATAGAGAAGGAAGATATAGTGATGTGGTACACCGTCGGTTTCCACCATGT 1913
Query 1869 CCCTAGCCAGGAAGATTACCCCACGATGCCTACTATATCTGGTGGCTTTGAGCTCC-ACC 1927
|||||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||
Sbjct 1914 TCCTAGCCAGGAAGATTACCCGACGATGCCTACTTTATCCGGTGGCTTTGAGCTCCGACC 1973
Query 1928 CGACCAACTTCTTT-GAGCGAAACCCTGTCCTCAAGACCAAACCCGTCAAGGTCACCACC 1986
||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1974 -GACCAACTT-TTTCGAGCGAAACCCTGTCCTCAAGACCAAACCCGTCAAAGTTACCACC 2031
Query 1987 GCTCGAAAGTGCACTCCTACAAACGATTAATAAACAGCTTAATCATATCATT 2038
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2032 GCTCGAAAGTGCACTCCTAAAAACGATTAATAAACAGCTTAATCATATCATT 2083
Score = 693 bits (375), Expect = 0.0
Identities = 505/564 (90%), Gaps = 23/564 (4%)
Strand=Plus/Plus
Query 7 CTCACAAAGAACAACATGGTTCCACTTCACTTCACCATTCTCATCCTTTTCTCTTTCATT 66
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1 CTCACAAAGAACAATATGGCTCCACTTCACTTCACCATTCTCATCCTTTTCTCTTTCGTT 60
Query 67 ATCGCAATCTCATCCTCAAGCTTCACTCCACCGCGTCACCCATTTGATCCCTTAACCGAG 126
|||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 61 ATCGTAGTCTCATCCTCAAGCTTTACTCCACCGCGTCACCCATTTGATCCCTTAACCGAG 120
Query 127 ACCGAACTCAAACTCGTCCGAACCATCATCAACAAGTCATACCCCGTTGGTCCAAACCAC 186
|||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct 121 ACCGAACTCAAACTCGTCCGAACCATCATCAACAAGTCGTACCCCGTTGGTCCGAATCAT 180
Query 187 AAGTTCACTTTCCAATACGTTGGTCTCAACGAACCCGACAAGTCTCTAGTCTTGTCGTGG 246
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 181 AAGTTCACTTTCCAATACGTTGGTCTCAACGAACCCAACAAGTCTCTAGTCTTGTCTTGG 240
Query 247 TACTACTCATCACGGAACCACACCATCAAACCACCGCCACGTCAAGCATTCGTCATCGCT 306
|||| | ||||| ||| || |||||||||||||| ||||| ||||| |||||||| |||
Sbjct 241 TACT-C--ATCACCGAATCATACCATCAAACCACCACCACGCCAAGCGTTCGTCATTGCT 297
Query 307 AGAGACAACGGAAAGAC-ACGAGAGATAGTCGTTGACTTTTCCTCTCGAGCCATCGTCTC 365
|||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||
Sbjct 298 CGAGACAACGGAAAGACCA-GAGAGATAGTCCTTGACTTTTCCTCTCGTGCCATCGTCTC 356
Query 366 GGACAAGATTCACATAGGAAATGGTTACCCTATGCTCTCAAACGACGAGC--------T- 416
|||||| |||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 357 GGACAAAATTCACGTAGGAAATGGTTACCCTATGCTCTCAAACGACGAGCAAGAAGCATC 416
Query 417 --------T-GTTGTCAAGTTCAAACCGTTTCGTGACTCGGTAGCGAAACGTGGCTTGAA 467
| |||||||||||||| |||||| ||||||||| |||||||||||||| ||
Sbjct 417 CACCGAGCTTGTTGTCAAGTTCAAGCCGTTTATTGACTCGGTCGCGAAACGTGGCTTAAA 476
Query 468 CGTTTCGGAAATCGTGTTTACAACGTCAACCATTGGATGGTACGGAGAGACTAAGGCCGA 527
||||||||| |||||||| || |||||||| |||||||||||||| ||||||||||||||
Sbjct 477 CGTTTCGGAGATCGTGTTCACGACGTCAACGATTGGATGGTACGGTGAGACTAAGGCCGA 536
Query 528 GACGGAGAGAGTTATTAGATTGAT 551
| ||||| ||||||||||||||||
Sbjct 537 GGCGGAGCGAGTTATTAGATTGAT 560
> AT1G31690.1 | Symbols: | Copper amine oxidase family protein
| chr1:11343980-11347767 FORWARD LENGTH=2034
Length=2034
Score = 1393 bits (754), Expect = 0.0
Identities = 1239/1470 (84%), Gaps = 46/1470 (3%)
Strand=Plus/Plus
Query 552 ACCTATTGAAGGAATGACGATAATCGTTAATCTTGACGAGATGAAGGTAACGGAGTTTAA 611
||| |||||||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||
Sbjct 576 ACCAATTGAAGGAATGACGATAATCGTTAACCTTGACCAGATGAAAGTAACGGGGTTCAA 635
Query 612 GGACAGG-TCAATGGTTACTATGCCCAAGGCTAACGGAACG-GAGTACCGTATCTCGAAG 669
||||||| || | || | ||||||| ||||||||||| | | |||||||||||||| |||
Sbjct 636 GGACAGGTTC-ACGGGTCCTATGCCGAAGGCTAACGGGA-GAGAGTACCGTATCTCAAAG 693
Query 670 ATGAACCCTCCGTTTGGGCCAACGCTTCACAA-CGCCGTTC-TCTTGCAGCCGGATGGTC 727
| || || |||||||| || |||||| || |||| || | || |||||||| ||||
Sbjct 694 CTCAAGCCGCCGTTTGGCCCGTCGCTTC-GAAGTGCCG-TCGTTTTCCAGCCGGACGGTC 751
Query 728 CAGGGTTCAAGATCGATGGACACATTGTGAGTATGTGGGCAAATTGGGAATTTCACATAT 787
||||||| ||||||||||||||| | ||||| | |||||||||||||| |||||||| |
Sbjct 752 CAGGGTTTAAGATCGATGGACACGTCGTGAG-A--TGGGCAAATTGGGAGTTTCACATGT 808
Query 788 CGTTTGACGTTCGAGCCGGTATCGTCATCTCTCTTGCAT-CACTTTTCGACACGGACGTG 846
| |||||||||||||||||| | ||||||||||| || | || ||||||||| |||| ||
Sbjct 809 CATTTGACGTTCGAGCCGGTCTTGTCATCTCTCTCGCGTCCA-TTTTCGACATGGACATG 867
Query 847 AACAAATACCGGCAAGTCCTATACAAAGGTCACTTGTCGGAAATGTTCATACCTTACATG 906
|||| ||||||||||||||||||||||||||| |||||||| |||||| |||||||||||
Sbjct 868 AACAGATACCGGCAAGTCCTATACAAAGGTCATTTGTCGGAGATGTTCGTACCTTACATG 927
Query 907 GACCCAAGTGATGATTGGTATTTCATTACTTATCTTGATTGTGGCG-ATTTCGGCTGCGG 965
||||||| ||| || ||||| ||||||| ||| || || ||||| | |||| ||||||||
Sbjct 928 GACCCAAATGACGACTGGTACTTCATTAGTTACCTAGACTGTGGTGAATTT-GGCTGCGG 986
Query 966 TCAATGC-GCCGTGTCTCC-TCAGCCGTACACTGATTGTCCAGCGGGTGCAGTTTTCATG 1023
||| | ||||| || || | ||||||| ||||||||||| || ||| | |||||||
Sbjct 987 CCAA-ACTGCCGTATC-CCTTGAGCCGTATACTGATTGTCCCCCGAATGCCGCTTTCATG 1044
Query 1024 GATGGTATTTTTGCTGGTCAAGATGGAACTCCCGCAAAAATCCCAAAAGTTATGTGCATT 1083
||||| || || | || |||||||||||||| ||||||| | || ||||||||||||
Sbjct 1045 GATGGCATCTTCCCGGGACAAGATGGAACTCCTACAAAAATATCGAATGTTATGTGCATT 1104
Query 1084 TTTGAAAAATATGCTGGAGATATCATGTGGCGACATACAGAAGCTGAAAT-CCCGAACTT 1142
|| ||||||||||||||||| || |||||||||||||| ||||||||| | |||| |||
Sbjct 1105 TTCGAAAAATATGCTGGAGACATTATGTGGCGACATACCGAAGCTGAAGTACCCG-GCTT 1163
Query 1143 AGAAATTACGGAGGTTAGACCAGACGTAAGTCTTGTAGCCCGGATCGTAACGACCGTGGG 1202
| |||| || |||||||||||||| |||||||||||||||||||| || ||||| |||||
Sbjct 1164 AAAAATCACAGAGGTTAGACCAGATGTAAGTCTTGTAGCCCGGATGGTGACGACAGTGGG 1223
Query 1203 GAACTACGACTACAT-AGTTGATTACGAGTTCAAGCCTAGTGGTTCCATCAAGATGGGGG 1261
||||||||||||||| | | || || |||||||| || |||||||||||||| |||||||
Sbjct 1224 GAACTACGACTACATCA-TCGAGTATGAGTTCAAACCAAGTGGTTCCATCAAAATGGGGG 1282
Query 1262 TCGGCTTAACCGGTGTTTTAGAAGTAAAACCAGCAGAATATATTCACACATCAGAAATCA 1321
|||| |||||||||||||||||||| ||||| | |||||| ||||||||||||| ||||
Sbjct 1283 TCGGTTTAACCGGTGTTTTAGAAGTTAAACCTGTGGAATATGTTCACACATCAGAGATCA 1342
Query 1322 AAGTAGGGGAGGACATAC-ACGGTACAATTGTGGCCGACAATACCGTTGGTGTTAACCAC 1380
||| | || ||||| | |||| |||||||| || ||||| ||||| || |||||||||
Sbjct 1343 AAG-A--AGACGACAT-CTACGGGACAATTGTTGCTGACAACACCGTCGGAGTTAACCAC 1398
Query 1381 GACCGTTTTGTAACATTCCGTCTTGATCTTGACATTGATGGTACCGAAAATTCCTTTGTT 1440
|| | || || |||||||||||||||||||| || |||||||| |||||||| ||||||
Sbjct 1399 GATCACTTCGTGACATTCCGTCTTGATCTTGATATAGATGGTACGGAAAATTCATTTGTT 1458
Query 1441 CGTAACGAACGT-GTGACCACGAGGACTCCAAAATCTGTTAACACACCGAGAAAAACCTA 1499
|||| ||||| | ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1459 CGTACCGAAC-TCGTGACCAAGAGGACTCCAAAATCTGTTAACACACCGAGAAAAAGCTA 1517
Query 1500 CTGGACAACGAAGCCAAAGACGGCCAAGACCGAGGCAGAAGCTCGGGTGAAAATAGGCTT 1559
|||||||| || | ||| || || || ||||||||||| |||||||||||| |||||||
Sbjct 1518 TTGGACAACAAAACGAAACACAGCAAAAACCGAGGCAGACGCTCGGGTGAAACTAGGCTT 1577
Query 1560 GAAAGCGGAGGAGCTGGTGGTGGTTAACCCTAACCGAAAAA-CGAAGCATGGCAATGAGG 1618
|| |||||||||| ||||||| |||||||||| || ||||| | ||||||||||||||||
Sbjct 1578 GAGAGCGGAGGAGTTGGTGGTCGTTAACCCTA-CCAAAAAAACTAAGCATGGCAATGAGG 1636
Query 1619 TTGGATACCGTTTACTTCATGGATCCGCCG-CAGGCCCACTTCTGGCTCCA-GATGATTA 1676
||||||||||| |||||| ||| ||| | || |||||||||| | |||| ||||| ||
Sbjct 1637 TTGGATACCGTCTACTTCCTGGG-CCGGCTTCAAGCCCACTTCTTG-TCCAAGATGACTA 1694
Query 1677 CCCGCAGATTCGAGCTGCATTCACCAACTATAACGTGTGGATCACGCCGTATAACAGGTC 1736
||| |||||||| || |||||||||||||| |||||||||||||| |||||||||| ||
Sbjct 1695 CCCACAGATTCGGGCAGCATTCACCAACTACAACGTGTGGATCACACCGTATAACAAATC 1754
Query 1737 GGAGGTTTGGGC-AGGTGGTTTGTACGCTGA-CAGGAGCCAAGGCGACGATACGTTGGCC 1794
|||||||||||| || |||||||||||||| | |||||||||| ||||| || || |||
Sbjct 1755 GGAGGTTTGGGCTAGC-GGTTTGTACGCTGATC-GGAGCCAAGGTGACGACACATTAGCC 1812
Query 1795 GTGTGGTCTCAAAG-GAATAGAAAAATAGAGAAGAAAGATATAGTGATGTGGTACACCGT 1853
|| ||||| ||||| || ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1813 GTATGGTCCCAAAGAGA-TAGGGAAATAGAGAACAAAGATATAGTGATGTGGTACACCGT 1871
Query 1854 CGGTTTCCACCATGTCCC-TAGCCAGGAAGATTACCCCACGATGCCTACTATATCTGGTG 1912
|| |||||||||||||| | |||| ||||||| || |||||||||||||| | ||| |
Sbjct 1872 TGGATTCCACCATGTCCCAT-GCCAAGAAGATTTTCCGACGATGCCTACTATGTTTGGCG 1930
Query 1913 GCTTTGAGCTCCACCCGACCAACTTCTTT-GAGCGAAACCCTGTCCTCAAGACCAAACCC 1971
||||||| || | || |||||||| ||| |||| ||| ||||| |||||| | |||||
Sbjct 1931 GCTTTGAACTTCGGCCAACCAACTT-TTTCGAGCAAAATCCTGTTCTCAAGGCTAAACCT 1989
Query 1972 GTCAAGGTCACCACCGCTCGAAAGTGCACT 2001
|||| |||||||| || |||||| |||
Sbjct 1990 TTCAATCTCACCACCATTCCAAAGTGTACT 2019
> AT1G31670.1 | Symbols: | Copper amine oxidase family protein
| chr1:11337558-11341889 FORWARD LENGTH=2226
Length=2226
Score = 468 bits (253), Expect = 1e-130
Identities = 400/470 (85%), Gaps = 14/470 (3%)
Strand=Plus/Plus
Query 1555 GGCTTGAAAGCGGAGGAGCTGGTGGTGGTTAACCCTAACCGAAAAACGAAGCATGGCAAT 1614
||| ||||||| |||||| || ||||||||||||||| | ||||| ||||| || |||
Sbjct 1763 GGC-TGAAAGCAGAGGAGTTGTTGGTGGTTAACCCTAGTAGGAAAACAAAGCACGGTAAT 1821
Query 1615 GAGGTTGGATACCGTTTACTTCATGGATCCG-C--C-GCAGGCCCACTTCTGGCTCCAGA 1670
|||||||||||||||||||||||||| ||| | | | ||| ||||||||||||| |||
Sbjct 1822 GAGGTTGGATACCGTTTACTTCATGGG-CCGGCTTCTGAAGGTCCACTTCTGGCTCAAGA 1880
Query 1671 TGATTACCCGCAGATTCGAGCTGCATTCACCAACTATAACGTGTGGATCACGCCGTATAA 1730
||||||||| || ||||| || ||||| ||||||||||| ||||||||||||||||| ||
Sbjct 1881 TGATTACCCACAAATTCGGGCAGCATTTACCAACTATAATGTGTGGATCACGCCGTACAA 1940
Query 1731 CAGGTCGGAGGTTTGGGC-AGGTGGTTTGTACGCTGACAGGAGCCAAGGCGACGATACGT 1789
|| ||||||||||||| || ||||||||||||||| |||||||||||||||| ||||
Sbjct 1941 CAACACGGAGGTTTGGGCCAGC-GGTTTGTACGCTGACCGGAGCCAAGGCGACGACACGT 1999
Query 1790 TGGCCGTGTGGTCTCAAAGGAATAGAAAAATAGAGAAGAAAGATATAGTGATGTGGTACA 1849
| ||||| ||||| ||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 2000 TAGCCGTTTGGTCCCAAAGGAATAGGAAAATAGAGAAGACAGATATAGTGATGTGGTACA 2059
Query 1850 CCGTCGGTTTCCACCATGTCCCTAGCCAGGAAGATTACCCCACGATGCCTACTATATCTG 1909
| ||||| ||||||||||||||| |||||||||||| || |||||||||||| | | ||
Sbjct 2060 CTGTCGGATTCCACCATGTCCCTTGCCAGGAAGATTTTCCGACGATGCCTACTTTGTTTG 2119
Query 1910 GTGGCTTTGAGCTCC-ACCCGACCAACTTCTTT-GAGCGAAACCCTGTCCTCAAGACCAA 1967
|||||||||| |||| ||| ||||||||| ||| |||| ||| |||| ||| ||||||||
Sbjct 2120 GTGGCTTTGAACTCCGACC-GACCAACTT-TTTCGAGCAAAATCCTGACCTTAAGACCAA 2177
Query 1968 ACCCGTCAAGGTCACCACCGCTCGAAAGTGCACT-CCTACAAACGATTAA 2016
|||| |||| ||| |||| | | || ||||||| || | |||||||||
Sbjct 2178 ACCCATCAAACTCAACACCACACCAACGTGCACTGCC-AGGAACGATTAA 2226
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101003496540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5