BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922245 Length=1276 Score E Sequences producing significant alignments: (Bits) Value AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1908 0.0 > AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:11394690-11396018 REVERSE LENGTH=1329 Length=1329 Score = 1908 bits (1033), Expect = 0.0 Identities = 1184/1257 (94%), Gaps = 10/1257 (1%) Strand=Plus/Plus Query 3 CTGCAAAAGAAAAATTTCCGATGAAAACTCTGGAATTAGCTTTACCTCCTTCTCCACCAT 62 ||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||| | Sbjct 27 CTGCAAAAG-AAAATTTCAGATGAAAACTTTGGAATTAGCTTTACCTCCATCTCCACCGT 85 Query 63 CTTTAGTTCCTTCTTTCAACTACAATTCCGCCGCACGAAGCGTCGGAAATGACGTCAGAA 122 |||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||| Sbjct 86 CTTTAGTTCCTTCTTTTAACTACAATTCCACCGCACGAAGCGTCGGGAATGATGTCAGAA 145 Query 123 CCAACTTCGATGTTCAACTTTTTCTAAGGAAACCCAAACACCAAAAATCAGAACCCGTCG 182 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 146 CCAACTTCGATGTTCAACTTTTTCTAAGGAAACCTAAACACCAAAAATCAGAACCTGTCG 205 Query 183 TCGTTATTCAACAACCTCAGATTCAACCGGAAAAACCAA-TTCCTCGTTGTTCTACTTCT 241 ||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||| Sbjct 206 TCGTTATTCAACAACCTCAGATTCAACCGCAAAATCCAAGTT-CTCGTTGTTCTACTTCT 264 Query 242 GATATTCTCAGACTAATGGATTCTCTTTCTTTACCTGGAAACGAAGATCTTTACTCGTGT 301 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| Sbjct 265 GATATTCTCAGACTAATGGATTCTCTTTCTTTACCAGGAAACGAAGATATTTACTCTTGT 324 Query 302 CTTGCCAAAGAATCAGCCAGAGAAAACGATCGACGTGGAGCTTACGAGTTACAAGTGCAT 361 ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct 325 CTTGCCAAAGAATCAGCCAGAGAAAACGATCAACGTGGAGCTCACGAGCTACAAGTGCAT 384 Query 362 ATCATGAAGTCCAGTATAAGAAGACCCACGACT-ACTTTTGTCAATCGTCTTCTCCTGAT 420 ||||||||||| ||||| |||||||||| | |||||| ||||||||||||| |||| Sbjct 385 ATCATGAAGTCTAGTAT---TAGACCCACGA-TCACTTTTATCAATCGTCTTCTTTTGAT 440 Query 421 GCATGTATCGTGTGGACGTTTAGATATTACACGCCACATGTTCGATAAAATGCCTCACAG 480 |||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||| Sbjct 441 GCATGTTTCGTGTGGGCGTTTAGATATTACACGCCAGATGTTCGATAGAATGCCTCACAG 500 Query 481 AGATTTTCATTCATGGGCAATTGTTTTCCTCGGTTGTATTGAAATGGGTGATTACGAAGA 540 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 501 AGATTTTCATTCCTGGGCAATTGTTTTCCTCGGTTGTATTGAAATGGGTGATTACGAGGA 560 Query 541 CGCTGCTTTGCTCTTTGTTTCGATGTTGAAATATTCTCAGAATGGTGCTTTCAAGATTCC 600 ||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 561 CGCTGCTTTCCTTTTTGTTTCGATGTTGAAACATTCTCAGAAAGGTGCTTTCAAGATTCC 620 Query 601 GCCTTGGATCATGGGCTGCGTTTTGAAAGCTTGTGCCATGATTAGAGACTTTGAGTTAGG 660 | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 621 GTCTTGGATCTTGGGCTGCGTTTTGAAAGCTTGTGCCATGATTAGAGACTTCGAGTTAGG 680 Query 661 GAAACAGGTTCATGCCTTGTGTCATAAGCTAGGGTGTATAGACGAAGAAGATTCATATCT 720 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 681 GAAACAGGTTCATGCCTTGTGTCATAAGCTAGGGTTTATAGACGAAGAAGATTCATATCT 740 Query 721 CTCGGGTTCTTTGATACGTTTCTACGGAGAATTCAGGTGTTTGGAAGACGCTAATCTCGT 780 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 741 ATCGGGTTCTTTGATACGTTTCTACGGAGAATTCAGGTGTTTGGAAGACGCTAATCTCGT 800 Query 781 TTTACATCAGCTTTCTAATGCTAACACCGTTGTTTGGGCAGCGAAGGTTACTAACGATTA 840 ||||| ||||| |||||||||||||| |||| |||||||||||| |||||||||||||| Sbjct 801 GTTACACCAGCTCTCTAATGCTAACACTGTTGCTTGGGCAGCGAAAGTTACTAACGATTA 860 Query 841 CAGAGAAGGGGAGTTTCAAGAAGTAATCCGCGATTTCATCGAAATGGGTAACCACAGAAT 900 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 861 CAGAGAAGGAGAGTTTCAAGAAGTAATCCGCGATTTCATCGAAATGGGTAACCATGGAAT 920 Query 901 CAGGAAGAACGTCTCAGTGTTCTCTAATGTTCTAAAAGCATG-TACATGGGTCAGTGACG 959 || ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 921 CAAGAAGAACGTCTCAGTGTTCTCTAATGTTCTAAAAGCATGCT-CATGGGTCAGTGACG 979 Query 960 GTGGGAGAAGCGGGAAACAAGTGCATGCGGATGCTATAAAGCTCGGATTTGAGTCAGATT 1019 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 980 GTGGGAGAAGCGGGCAACAAGTGCATGCGAATGCTATAAAGCTCGGATTTGAGTCAGATT 1039 Query 1020 GTTTGATCCGATGTCGGTTAATTGAGATGTATGGGAAGTATGGGAAGGTGAAAGACGCGG 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1040 GTTTGATCCGATGTCGGTTAATTGAGATGTATGGGAAGTATGGGAAGGTGAAAGACGCGG 1099 Query 1080 AAAAGGTGTTCAAGAGTAGCAAGGACGAGACAAATGTTAATTGCTGGAACGCTATGGTCG 1139 ||||||| || |||||||| ||||||||||| | ||||| |||||||||||||||||||| Sbjct 1100 AAAAGGTTTTTAAGAGTAGTAAGGACGAGACTAGTGTTAGTTGCTGGAACGCTATGGTCG 1159 Query 1140 CGGGTTATATGCAGAATGGGATTTACATTGAAGCCATAAAGCTTCTCTATCAGATGAAAG 1199 | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1160 CAAGTTATATGCAGAATGGGATTTACATTGAAGCCATTAAGCTTCTCTATCAGATGAAAG 1219 Query 1200 CAACTGGAATCAAAGCACAGGACACGCTTTTGAACGAAGCCCACTTTCAGCTATAAC 1256 ||||||||||||||||||| |||||||||||||||||||||||| ||||| | |||| Sbjct 1220 CAACTGGAATCAAAGCACATGACACGCTTTTGAACGAAGCCCACCTTCAGATGTAAC 1276 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62750681250 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5