BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922256 Length=890 Score E Sequences producing significant alignments: (Bits) Value AT1G31860.1 | Symbols: AT-IE, HISN2 | histidine biosynthesis bi... 1419 0.0 > AT1G31860.1 | Symbols: AT-IE, HISN2 | histidine biosynthesis bifunctional protein (HISIE) | chr1:11434108-11436607 REVERSE LENGTH=1065 Length=1065 Score = 1419 bits (768), Expect = 0.0 Identities = 843/880 (96%), Gaps = 2/880 (0%) Strand=Plus/Plus Query 1 TTTTCGTTTCTCATTGCGTTAACATGGCGGTATCGTACAATGCATTAGCACAGTCTTTAG 60 |||||||||||| | ||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 55 TTTTCGTTTCTCGTAGCGTTAAAATGGCGGTATCGTACAATGCATTAGCTCAGTCTTTAG 114 Query 61 CGAGAAGTAGCTGCTTCATCCCCAAGTCTTATTGCGTTAGAGATACTAAGCAGAGAAGCA 120 ||||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||| Sbjct 115 CGAGAAGTAGCTGCTTCATCCCCAAACCTTATTCCTTTAGAGATACTAAGCTGAGAAGCA 174 Query 121 GATCCAATGTCGTATTTGCGT-CTAATGATAATAACAACATTGCTCTTCAAGCTAAGGTA 179 |||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||| Sbjct 175 GATCCAATGTCGTATTCGCGTGC-AATGATAATAAGAACATTGCTCTTCAAGCTAAGGTA 233 Query 180 GATAACTTATTGGACCGCATAAAATGGGATGACAAAGGATTAGCTGTGGCAATAGCACAA 239 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 234 GATAACTTGTTGGACCGCATTAAATGGGATGACAAAGGATTAGCTGTGGCAATAGCACAA 293 Query 240 AACGTTGATACTGGAGCAGTATTAATGCAAGGCTTTGTTAATAGGGAGGCTCTCTCCACA 299 ||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 294 AACGTTGATACGGGAGCAGTATTGATGCAAGGCTTTGTTAATAGGGAGGCCCTCTCCACA 353 Query 300 ACCATAAGTTCTCGGAAAGCTACATTCTTTAGTCGATCAAGATCAACCTTATGGACTAAA 359 ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 354 ACCATCAGTTCTCGGAAAGCTACATTCTTTAGTCGATCAAGATCTACCTTATGGACTAAG 413 Query 360 GGAGAGACATCCAATAACTTCATCAATATTCTCGATGTGTATATTGATTGCGATCGTGAT 419 |||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| Sbjct 414 GGAGAGACATCCAATAACTTCATCAATATTCTTGATGTGTATGTTGATTGTGATCGTGAT 473 Query 420 TCGATTATTTACCTTGGAACACCTGATGGACCTACCTGTCACACAGGGGAAGAGACTTGT 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 TCGATTATTTACCTTGGAACACCTGATGGACCTACCTGTCACACAGGGGAAGAGACTTGT 533 Query 480 TACTACACATCGGTTTTTGATCAATTAAACAATGATGAGCCTTCAGGAAATAAGCTAGCA 539 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 534 TACTACACATCGGTTTTTGATCAATTAAACAATGATGAGGCTTCAGGAAACAAGCTAGCA 593 Query 540 TTAACAACATTGTACTCGCTAGAATCAATCATTTCCAAGCGGAAAGAAGAATCAACAGTT 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 594 TTAACAACATTGTACTCGCTAGAATCAATCATTTCCAAGCGGAAAGAAGAATCAACAGTT 653 Query 600 CCTCAAGAAGGTAAACCGTCATGGACAAGACGGTTATTGACGGATGACGCTCTCCTTTGC 659 ||||||||||||||||| |||||||| ||||||| ||||||||||||||||| |||||| Sbjct 654 CCTCAAGAAGGTAAACCATCATGGACTCGACGGTTGTTGACGGATGACGCTCTGCTTTGC 713 Query 660 ACAAAGATCAGGGAAGAAGCTGACGAGTTATGCAGAACACTGGAGGATAATGAGGAAGTT 719 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 714 TCAAAGATCAGGGAAGAAGCTGACGAGTTATGCAGAACACTGGAGGATAATGAGGAAGTT 773 Query 720 TCAAGAACACCATCGGAGATGGCTGATGTGTTATACCACGCAATGGTGCTTCTATCTAAA 779 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 774 TCAAGAACACCATCAGAGATGGCTGATGTTTTATACCACGCAATGGTGCTTCTATCTAAA 833 Query 780 AGGGGTGTGAAGATGGAAGATGTTCTTGAAGTTCTTAGAAAACGCTTCTCTCAATCTGGA 839 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 834 AGGGGTGTGAAGATGGAAGATGTTCTTGAAGTTCTTAGGAAACGCTTCTCTCAATCTGGA 893 Query 840 ATCGAGGAGAAGCAAAACCGTACAAAGTAACTGTTTTCTT 879 ||||||||||||||||||||||||||||||| ||||||| Sbjct 894 ATCGAGGAGAAGCAAAACCGTACAAAGTAACCATTTTCTT 933 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43452537155 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5