BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922431 Length=324 Score E Sequences producing significant alignments: (Bits) Value AT4G10270.1 | Symbols: | Wound-responsive family protein | chr... 141 4e-33 AT4G10265.1 | Symbols: | Wound-responsive family protein | chr... 135 2e-31 > AT4G10270.1 | Symbols: | Wound-responsive family protein | chr4:6374734-6375210 FORWARD LENGTH=477 Length=477 Score = 141 bits (76), Expect = 4e-33 Identities = 214/278 (77%), Gaps = 19/278 (7%) Strand=Plus/Plus Query 17 AAAGATGAGTTCAACAAGCAAAGCATGGTTAGTAGCTGCAAGCATCGGAGCCGTTGAAGC 76 |||||||||||| ||||||||||||||| ||| || | |||||||||||||| || || Sbjct 68 AAAGATGAGTTCTACAAGCAAAGCATGGACAGTGGCAGTGAGCATCGGAGCCGTAGAGGC 127 Query 77 GTCCAAGGACCAATTAGG-CATGTGTCGCTGGAACTACTTGA-TCCGATCAGTGAATCAA 134 | || |||||| |||| | | ||||| ||||||||| | | |||| || || |||||| Sbjct 128 ATTAAAAGACCAACTAGGTC-TTTGTCGGTGGAACTACAT-ACTCCGGTCGGTTAATCAA 185 Query 135 CGTATCCGTAACAACGTGAGATCCGCTTCTC-AGGCCAACAGATTCTCTTCTTCAACCGT 193 | | |||| |||||||| ||||| | ||||| ||| || || |||||||| || | || Sbjct 186 CATCTCCGGAACAACGTTAGATCTGTTTCTCAAGG-GAAAAGGTTCTCTTCGTCTTCTGT 244 Query 194 CGT-CGC-GTCCGTTA--AGGAC-GAT-A-A-C---AAGGCAAAGCAGGCTGAGGAGTCA 242 | | ||| | |||||| | | | | | | ||||| ||| ||||||| || || Sbjct 245 C-TCCGCAG-CCGTTACCTCCTCTGGTGAGAGCGAGAAGGCTAAGAAGGCTGAAGAATCT 302 Query 243 CTTAGGACGGTCATGTACTTGAGCTGTTGGGGTCCTAA 280 ||||| || ||||||||||||||||||||||||||||| Sbjct 303 CTTAGAACAGTCATGTACTTGAGCTGTTGGGGTCCTAA 340 > AT4G10265.1 | Symbols: | Wound-responsive family protein | chr4:6373097-6373536 REVERSE LENGTH=440 Length=440 Score = 135 bits (73), Expect = 2e-31 Identities = 203/263 (77%), Gaps = 20/263 (8%) Strand=Plus/Plus Query 21 ATGAGTTCAACAAGCAAAGCATGGTTAGTAGCTGCAAGCATCGGAGCCGTTGAAGCGTCC 80 ||||| || |||||||| | ||| | || ||||||||||||||||||||||| || | Sbjct 60 ATGAGCTCTGCAAGCAAAACGTGGATGGTTGCTGCAAGCATCGGAGCCGTTGAGGCATTG 119 Query 81 AAGGACCAATTAGGCATGTGTCGCTGGAACTACTTGATCCGATCAGTGAATCAACGTATC 140 || |||||| ||||| ||||||| ||||||||| |||||||||| | ||||| | ||||| Sbjct 120 AAAGACCAACTAGGCGTGTGTCGTTGGAACTACGTGATCCGATCTGCGAATC-A-GTATC 177 Query 141 --CGTAACAACGTGAGATCCGCT-TCTCAGGCCAACAGATTCTCTTCTTCAACCGTCGTC 197 || |||||| | ||||||| | || || | | | ||| ||| |||| || || || Sbjct 178 TACGCAACAACTTAAGATCCG-TGTCGCAAG-CTA-AGAAGCTC-TCTT---CC-TCATC 229 Query 198 GCGTCCG-TTAAGGACGATAACAAGGCAAAGCAGGCTGAGGAGTCACTTAGGACGGTCAT 256 | || || | || |||||| | ||||| ||||| || || || ||||| ||||| Sbjct 230 -AAT-CGATT-A-TAC--CAACAAGACCAAGCAAGCTGAAGAATCGCTGAGGACAGTCAT 283 Query 257 GTACTTGAGCTGTTGGGGTCCTA 279 ||||||||||||||||||||||| Sbjct 284 GTACTTGAGCTGTTGGGGTCCTA 306 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15080324700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5