BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922447
Length=1368
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33540.1 | Symbols: scpl18 | serine carboxypeptidase-like 18... 1550 0.0
AT5G36180.1 | Symbols: scpl1 | serine carboxypeptidase-like 1 |... 326 5e-88
AT2G22970.3 | Symbols: SCPL11 | serine carboxypeptidase-like 11... 294 1e-78
> AT1G33540.1 | Symbols: scpl18 | serine carboxypeptidase-like
18 | chr1:12162349-12164700 REVERSE LENGTH=1341
Length=1341
Score = 1550 bits (839), Expect = 0.0
Identities = 1004/1080 (93%), Gaps = 25/1080 (2%)
Strand=Plus/Plus
Query 21 ATGTCTAAAGCATGGAAACTTAAGTTGCTTCTTCTACTTCAACTGCTACTCTTGAGTCAA 80
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGTCTAAAGCATGGAAACTTAAGTTGCTTCTTCTACTTCAACTGCTACTTTTGAGTCAA 60
Query 81 CATGATGTTGATTCAGCTTCTGTGATTAGCTATCTTCCTGGTTTCGAAGGTCTTCTTCCA 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CATGATGTTGATTCAGCTTCTGTGATTAGCTATCTTCCTGGTTTCGAAGGTCTTCTTCCA 120
Query 141 TTCCACCTTGAAACTGGGTACATTGGTGTTGGTGAGGGAGAGAAAGTGCAACTTTTCTAC 200
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 121 TTCCACCTTGAAACTGGCTACATTGGTGTTGGTGAGGGAGAGAAAGTGCAGCTTTTCTAC 180
Query 201 TACTTTATTAAATCAGAGAACAATCCTGAAGAAGACCCTCTTATTCTCTGGTTAACTGGA 260
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 181 TACTTTATCAAATCAGAGAACAATCCTGAAGAAGACCCTCTTATTATCTGGTTAACTGGA 240
Query 261 GGACCAGCTTGCACTGCTCTCTCTGCACTTGCTCTCGAGATCGGGCCGTTGACTTTCAAG 320
||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct 241 GGACCAGCTTGCACTGCTCTCTCCGCACTTGCTTTCGAGATCGGGCCGTTGACTTTTAAG 300
Query 321 ACTGAGGGTTACAATGGAGGTTCACCTTCTCTTGTCTCCACTTCATATTCTTGGACAAAG 380
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 301 ACTGAGGGTTACAATGGAGGTTTGCCTTCTCTTGTCTCCACTTCATATTCTTGGACAAAG 360
Query 381 GTAGCTAGCATAATATTCTTGGATCAGCCTGTTGG-AGCTGGCTTCTCCTACTCAACAAC 439
||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct 361 GTAGCTAGCATAATATTCTTGGATCAGCCTGTTGGGA-CTGGCTACTCCTACTCAACAAC 419
Query 440 TCCTCTTTCTGATAAGCCTAGTGACACAGGCGAAACAAAACAGACATATGAGTTTCTTCA 499
|||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| ||
Sbjct 420 TCCTCTTTCTTATAAGCCTAGTGACACAGGAGAAGCAAAACAGACCTATGAGTTTCTCCA 479
Query 500 AAAGTGGCTAGTGGAGAATCCAGATCGAAACAAACAAACACTTCAACATGTCTCAAATCC 559
|||||||||||||||||||||| | | || ||||||||| ||
Sbjct 480 AAAGTGGCTAGTGGAGAATCCACA--G--------------TT-----TGTCTCAAACCC 518
Query 560 TTTCTATGTCGGCGGAGATTCTTATTCTGGTATAGTTGTTCGAGCTATTGTTCAGCAGAT 619
| |||||||||||||||||||||| | ||||||||||||| ||||||||| || |||||
Sbjct 519 TATCTATGTCGGCGGAGATTCTTACGCCGGTATAGTTGTTCCAGCTATTGTACAACAGAT 578
Query 620 CTCAATAGGAAATGAACATGGCGACAACCCTAAAATGAATCTTAAGGGTTATATTCTTGG 679
|||||||||||||||||||||| | || ||| |||| |||||||||||||||||||||||
Sbjct 579 CTCAATAGGAAATGAACATGGCTATAAACCTCAAATAAATCTTAAGGGTTATATTCTTGG 638
Query 680 GAACCCTTCAACAGATCTTGATAGTGATCATAACTCCAAGATTCCATATGCTCATCGAAT 739
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 639 GAACCCTTCAACAGATCTTGATAGTGATCATAACTCCAAGATTCCGTATGCTCATCGAAT 698
Query 740 GGGACTTATCTCTGATGAACTCTATGAGTCACTTAAGAGAACCTGCCAAGGAAATTATGT 799
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 699 GGGACTTATCTCTGATGAACTCTACGAGTCGCTTAAGAGAACCTGCCAAGGAAATTATGT 758
Query 800 AAAAGTGGATCCTACTAATATACAATGCTTGATATTGGTGGACAACTACCAAAAGTGTGT 859
|||||||||||||||||||| | ||||||||| |||| |||| ||||| |||||||||
Sbjct 759 AAAAGTGGATCCTACTAATACAAAATGCTTGAAATTGATGGAGGACTACGGAAAGTGTGT 818
Query 860 TTCAAGGATAAATGAAGGACTCATTTTGATAGCATTGTGTGATTTGGCATCACCAAATCC 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 TTCAAGGATAAATGAAGGACTCATTTTGATAGCATTGTGTGATTTGGCATCACCAAATCC 878
Query 920 TTATTCAGGGGAACACGGTGAAAGAAGCTATCTT-ACGACACTTGTTCAGCCAAATCTTT 978
||||||||| |||||||||| ||||||||||||| | |||||||||||| || ||||||
Sbjct 879 TTATTCAGGAGAACACGGTGGAAGAAGCTATCTTCA-GACACTTGTTCAATCAGATCTTT 937
Query 979 CTCTTCCCACTCCCGACTGCTATATGTATCGGTATTTGCTAGCTTCACATTGGGCTAATG 1038
||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 938 CTCTTCCCACTCCTGATTGCTATATGTACCGGTATTTGCTAGCTTCACATTGGGCTAATG 997
Query 1039 ATGAAGATGTACGCAGAGCACTTCATGTAGTGAAAGGAAGTATAGGGAAATGGATGAGAT 1098
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 998 ATGAAGATGTACGCAGAGAACTTCATGTGGTGAAAGGAAGTATAGGGAAATGGATGAGAT 1057
Score = 350 bits (189), Expect = 3e-95
Identities = 230/249 (92%), Gaps = 6/249 (2%)
Strand=Plus/Plus
Query 1099 TGTACCGTACCACCGAAACAATAGCATCGA-AGGTGATTATCGGTCATTGGTTAATTTAC 1157
||| |||||||| ||||||||||||||| | ||| |||||||||||||||| ||||
Sbjct 1098 TGTGCCGTACCATCGAAACAATAGCATC-ATAGGGGATTATCGGTCATTGG----TTTAT 1152
Query 1158 AGCGGTGATCACGACATGATGGTGCCTTATACTGGAACTGAAGCTTGGATTAAATCTCTA 1217
||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 1153 AGCAGTGATCACGACATGATGGTGCCTTATATTGGAACTGAAGCTTGGATCAAATCTCTA 1212
Query 1218 AACTACTCAATAACTGACGATTGGAGGCCTTGGTTCGTTAACAATCAAGGAGGAGGGCAC 1277
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1213 AACTACTCAATAACTGACGATTGGAGACCTTGGTTTGTTAACAATCAAGGAGGAGGGCAC 1272
Query 1278 ACCGCAGAGTATAAACCGGAGGAAAGCTTCATAATGTTCCAAAGGTGGATAAGTGGACGA 1337
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1273 ACCGCAGAGTATAAACCAGAGGAAAGCTTCATGATGTTCCAAAGGTGGATAAGTGGCCGA 1332
Query 1338 ACTCTCTAG 1346
||||||||
Sbjct 1333 CCTCTCTAG 1341
> AT5G36180.1 | Symbols: scpl1 | serine carboxypeptidase-like 1
| chr5:14239028-14242135 FORWARD LENGTH=1769
Length=1769
Score = 326 bits (176), Expect = 5e-88
Identities = 617/818 (75%), Gaps = 77/818 (9%)
Strand=Plus/Plus
Query 46 TGCTTCTTCTACTTCAAC-TGCTACTCTTGAGTCAA-CATGATGTTGATTCAGCTTC--T 101
||||| | || ||||| | || || |||||||| || || ||||||| || || || |
Sbjct 208 TGCTTGTGCTTCTTCACCTTG-TATTCTTGAGT-AAGCAACATGTTGACTCTGCCTCAAT 265
Query 102 -GTGATTAGCTATCTTCCTGGTTTCGAAGGTCTTCTTCCATTCCACCTTGAAACTGGGTA 160
|| | || | |||||||||||| ||||||| ||||| || | |||||||| |||||
Sbjct 266 CGTCA--AG-TCTCTTCCTGGTTTTGAAGGTCAACTTCCCTTTGAGCTTGAAACCGGGTA 322
Query 161 CATTGGTGTTGGTGAGGGAGAGAAAGTGCAACTTTTCTACTACTTTATTAAATCAGAGAA 220
|||||||||||||||| |||| |||||||||| ||||||||||| || || || ||||
Sbjct 323 TATTGGTGTTGGTGAGGAAGAGGAAGTGCAACTATTCTACTACTTCATCAAGTCTGAGAG 382
Query 221 CAATCCTGAAGAAGACCCTCTTATTCTCTGGTTAACTGGAGGACC-AGCTTGCACTGCTC 279
|| || ||||||||||||||||||||||| ||||||||||||| || ||| |||| |
Sbjct 383 GAACCCAAAAGAAGACCCTCTTATTCTCTGGCTAACTGGAGGACCTGGC-TGCTCTGC-C 440
Query 280 -TCTCT-GCACTTGC-TCTCG-AGATCGGGCCGT-TGACTTTCAAGAC-TGAGGGTTACA 333
||||| || ||| | | | | | || ||||| | | ||| | ||| | ||| | |||||
Sbjct 441 ATCTCTGGC-CTT-CTTTTTGAAAAT-GGGCC-TCTAACTATGAAG-CTTGACGTTTACA 495
Query 334 ATGGAGGT-TCACCTTCTCTT-GTCTCCACTTCATATTCTTGGACAAAG-GTAGCTAGCA 390
||||| | || |||||| || ||||| ||| ||||||||||||||||| | | ||||
Sbjct 496 ATGGAACTCTC-CCTTCT-TTGGTCTCTACTACATATTCTTGGACAAAGACT-TCAAGCA 552
Query 391 TAATATTCTTGGATCAGCCTGTTGGAGCTGGCTTCTCCTACTCAACAACTCCTCT-TTCT 449
|||||||||||||||||||||||||| ||||||| ||||| |||| ||||| | || |
Sbjct 553 TAATATTCTTGGATCAGCCTGTTGGAACTGGCTTTTCCTATTCAAGAACTCAACAATT-T 611
Query 450 GATAAGCCTAGTGACACAGGCGAAACAAAACAGA-CATATGAGTTTCTTCAAAAGTGGCT 508
|||| |||||||| |||| ||| | |||| || | |||||||||||||||| |||||
Sbjct 612 AATAAACCTAGTGATTCAGGAGAAGCCAAACGGATCC-ATGAGTTTCTTCAAAAATGGCT 670
Query 509 AGTGGAGAATCCAGATCGAAACAAACAAACACTTCAACATGTCTCAAATCCTTTCTATGT 568
|| | | || | | || || ||| | | | ||| |||||||||||
Sbjct 671 AG-G-A-AAGC-A--TC-AAGTGTT-------TTC--C-T--C-CAAC-CCTTTCTATGT 709
Query 569 CGGCGGAGATTCTTATTCTGGTATAGTTGTTCGAGCTATTGTTCA-GCAGATCTCAATAG 627
| ||||||||||||||| ||| | ||||||| |||| ||||| | | ||||||| ||
Sbjct 710 TGCCGGAGATTCTTATTCCGGTTTGGTTGTTCCCGCTACCGTTCAAGAA-ATCTCAAAAG 768
Query 628 GAAATGAACA-TGGC-GACAACCCTAAAATGAATCTTAAGGGTTATATTCTTGGGAACCC 685
||||| | | || | | ||| ||| ||| |||||| |||| ||| | || || |||||
Sbjct 769 GAAATTATGAATG-CTG-CAATCCTCCAATAAATCTTCAGGGCTATGTGCTCGGTAACCC 826
Query 686 -TTCAACAGATCT-TGATAG-TGATCA-TAACT-CCAAGATTCCATATGCTCATCGAATG 740
|| |||||| || | | | || | | |||| || ||||||| ||| ||| |||||
Sbjct 827 GTT-AACAGA-CTAT-ACAACTGGT-AGTAACAGCCGC-ATTCCATTTGCCCATGGAATG 881
Query 741 GGACTTATCTCTGATGAACTCTATGAGTCACTT-AAGAGAACCTGCCAAGGA-AATTATG 798
| ||| || |||||||||||||| ||||| || |||| |||||| ||||| ||| ||
Sbjct 882 GCACTGATATCTGATGAACTCTACGAGTCG-TTGAAGAAAACCTGTAAAGGAGAAT-ATA 939
Query 799 TAAAAGTGGATCCTAC-TAATATACAATGCTTGATATT 835
||| || |||| || ||| | ||||||||||| |||
Sbjct 940 CAAATGTTCATCC-ACGTAACACACAATGCTTGAAATT 976
> AT2G22970.3 | Symbols: SCPL11 | serine carboxypeptidase-like
11 | chr2:9774853-9778512 FORWARD LENGTH=1611
Length=1611
Score = 294 bits (159), Expect = 1e-78
Identities = 549/725 (76%), Gaps = 76/725 (10%)
Strand=Plus/Plus
Query 113 TCTTCCTGGTTTCGAAGGTCTTCTTCCATTCCACCTTGAAACTGGGTACATTGGTGTTGG 172
|||||| ||||| ||||| | |||||| ||| | |||||||| |||||||||||| ||||
Sbjct 103 TCTTCCCGGTTTTGAAGGCCCTCTTCCTTTCGAACTTGAAACCGGGTACATTGGTATTGG 162
Query 173 TGAGGGAGAGAAAGTGCAACTT-TTCTACTACTTT-ATTAAATCAGAGA-ACAATCCTGA 229
||||| |||| |||||||| || ||||| || ||| || ||||| |||| | ||||| |
Sbjct 163 TGAGGAAGAGGAAGTGCAA-TTGTTCTATTA-TTTCATCAAATCTGAGAGA-AATCCAAA 219
Query 230 AGAAGACCCTCTTATTCTCTGGTTAACTGGAGGACCAGCTTGCACTGCTCTCTCT-GCAC 288
||||||||||||| |||||||||||| ||||||||| | || || || || || || |
Sbjct 220 AGAAGACCCTCTTCTTCTCTGGTTAAGTGGAGGACCTGGATGTTCTTCTATCACTGGC-C 278
Query 289 TTGC-TCTCGAG-ATCGGGCCGTTGACTTTCAAGACTGAGGGTTACAATGG-AG-GTTCA 344
|| | | || || || || || ||| |||| ||| | |||| ||||||||| || |||
Sbjct 279 TT-CTTTTCCAGAAT-GGACCTTTGGCTTTGAAGTCCGAGGTTTACAATGGAAGTGTT-- 334
Query 345 CCTTCTCTT-GTCTCCACTTCATATTCTTGGACAAAGGTAGCTAGCATAATATTCTTGGA 403
|||||| || ||||| ||| ||||||| ||||| ||| || | |||||||||||||||
Sbjct 335 CCTTCT-TTGGTCTCTACTACATATTCGTGGACTAAGACGGCGAACATAATATTCTTGGA 393
Query 404 TCAGCCTGTTGGAGCTGGCTTCTCCTACTCAACAACTCCTCTT-TCTGATA-AGCCTAGT 461
||| |||||||||||||||||||||||||||| | |||| ||| | ||||| | |||| |
Sbjct 394 TCAACCTGTTGGAGCTGGCTTCTCCTACTCAAGAGCTCCACTTAT-TGATACA-CCTACT 451
Query 462 GACACAGGCGAAACAAAACAGACAT--ATGAGTTTCTTCAAAAGTGGCTAGTGGAGAATC 519
|||||||| ||| || || || |||||||||| |||||||||||| || |
Sbjct 452 GACACAGGAGAAGTTAAG-AGG-ATTCATGAGTTTCTCCAAAAGTGGCTA----AGCA-- 503
Query 520 CAGATCGAAACAAACAAACACTTCAACATGTCTCAAATCC-TTTCTATG-TCGGCGGAGA 577
|| | | | || || || | | || ||| || ||| |||| | ||||||||
Sbjct 504 -AG--C-AT-C---CA--CAGTTTT-C-T-TC-CAA--CCATTTTTATGCT-GGCGGAGA 546
Query 578 TTCTTATTCTGGTAT-AGTTGTTC-GAGCTATTGTTCA-GCAGATCTC-AATAGGAAATG 633
||||||||| ||||| | |||||| | || | ||||| | | ||||| || |||||||
Sbjct 547 TTCTTATTCCGGTATGA-TTGTTCCG-GCCCTCGTTCAAGAA-ATCTCGAA-AGGAAATT 602
Query 634 A-ACATGGCGACAACCCTAAAATGAATCTTAAGGGTTATATTCTTGGGAACCCT-TCAAC 691
| | ||| | ||||||| || ||||| ||||||||| | || |||||||| | |||
Sbjct 603 ATATATGTTG-CAACCCTCCTATAAATCTAAAGGGTTATGTACTCGGGAACCCGAT-AAC 660
Query 692 AG-ATCTTGATAGT-GATC-ATAACTC-CAAGATTCCATATGCTCATCGAATGGGACTTA 747
| | | || || || | | |||| | ||||||| | ||||| |||||| ||| |
Sbjct 661 -GCA-C--GA-AGACGACCCA-AACTATCGC-ATTCCATTTTCTCATGGAATGGCACTAA 713
Query 748 TCTCTGATGAACTCTATGAGTCACTTAAGAGAA-CCTGCCAAGGAAATTATGTAAAAGTG 806
| || |||||||| || |||||| ||| | ||| ||||| ||||||||||| | || |||
Sbjct 714 TTTCAGATGAACTATACGAGTCAATTAGG-GAAGCCTGCAAAGGAAATTATTTCAATGTG 772
Query 807 GATCC 811
|||||
Sbjct 773 GATCC 777
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67369131390
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5