BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922451
Length=1479
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33590.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 1997 0.0
AT1G33600.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 1013 0.0
AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 843 0.0
> AT1G33590.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12177777-12179413 FORWARD LENGTH=1637
Length=1637
Score = 1997 bits (1081), Expect = 0.0
Identities = 1338/1464 (91%), Gaps = 10/1464 (1%)
Strand=Plus/Plus
Query 19 CACCACCATGAACTCTT-CTTGTACTCTCACT-ATTTTTACCTTCGTTATCTTTCTCCGG 76
||||||||||||||||| ||| ||||||| | || ||||||||||| ||||| ||||
Sbjct 5 CACCACCATGAACTCTTCCTT-TACTCTC-TTCATCTTTACCTTCGTCATCTTCCTCCAA 62
Query 77 TGTCTAAATCCCACCGGAGCTGCCACGTGTCATCCTGATGATGAAGCGGGTCTTCTAGCT 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 TGTCTAAATCCCACCGGAGCTGCCACGTGTCATCCTGATGATGAAGCGGGTCTTCTAGCT 122
Query 137 TTTAAAGCGGGTATAACCCGAGACCCTTCGGGTATTCTCAGTTCTTGGAAGAAAGGTACT 196
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 123 TTCAAAGCGGGTATAACCCGAGATCCTTCGGGTATTCTCAGTTCTTGGAAGAAAGGTACC 182
Query 197 GCTTGTTGTTCTTGGAACGGTGTCACTTGTCTCACCACTGACCGCGTCTCCGCACTCTCT 256
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 183 GCTTGTTGTTCTTGGAACGGTGTCACTTGTCTCACCACTGACCGTGTCTCTGCACTCTCT 242
Query 257 ATCGCTGGACAAGCCGATGTTGCGGGAAGCTTCCTCTCCGGCACTCTCTCGCCGTCGCTA 316
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 243 GTCGCTGGACAAGCCGATGTTGCTGGAAGCTTCCTCTCCGGCACTCTCTCGCCGTCGTTG 302
Query 317 GCTAAACTCCAA-CACCTCGATGGGATTTACTTCACCGATCTCAAGAACATCACTGGTTC 375
|||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 303 GCTAAACT-CAAGCACCTTGATGGGATTTACTTCACCGATCTCAAGAACATCACTGGTTC 361
Query 376 TTTTCCTCAATTCCTTTTCCAATTACCAAATCTTAAGTTCGTTTACATTGAGAATAACCG 435
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 362 TTTTCCTCAATTCCTTTTCCAATTACCAAATCTTAAGTACGTATACATTGAGAATAACCG 421
Query 436 CCTCTCCGGTCCTCTTCCGGTTAACATCGGTTCTCTTAGCCAGCTCGAAGCGTTCAGTCT 495
||||| ||| ||||||||| |||||||||| | || |||||||| ||||||||||| ||
Sbjct 422 TCTCTCTGGTACTCTTCCGGCTAACATCGGTGCGCTAAGCCAGCTTGAAGCGTTCAGCCT 481
Query 496 CCAGGGAAACCGGTTCACCGGTCCAATCCCAAGCTCGATTTCTAATTTGACTCGGTTAAC 555
| |||||||||||||||||||||| ||||| |||||||| ||||||||||||| ||||||
Sbjct 482 CGAGGGAAACCGGTTCACCGGTCCGATCCCGAGCTCGATATCTAATTTGACTCTGTTAAC 541
Query 556 ACAACTCAAACTCGGTAGTAATCTCCTAACCGGCACTATTCCCTTAGGAATTGCCAATCT 615
|||||||||||||| | ||||||||||||||| ||||| || ||||| | || |||||
Sbjct 542 TCAACTCAAACTCGGCAATAATCTCCTAACCGGAACTATACCGTTAGGGGTCGCTAATCT 601
Query 616 CAAGCTCATGTCCTATCTCAACCTTGGAGGTAACCGGCTCACTGGCACTATCCCGGACAT 675
|||||||||||| ||||||||||||||||||||||| |||||||| || || || || ||
Sbjct 602 CAAGCTCATGTCGTATCTCAACCTTGGAGGTAACCGTCTCACTGGAACCATTCCAGATAT 661
Query 676 TTTCAAATCCATGCCGGAACTTCGATCATTAACTCTCTCCCACAACGGATTCTCCGGGAA 735
||||||||||||||| || || ||||| ||||||||||||| ||||||||||||||||||
Sbjct 662 TTTCAAATCCATGCCAGAGCTCCGATCTTTAACTCTCTCCCGCAACGGATTCTCCGGGAA 721
Query 736 TCTTCCTCCGTCCATTGCATCACTCGCACCGATTCTCAGGTTCCTCGAGTTAGGCCATAA 795
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 722 TCTTCCTCCGTCCATTGCATCACTCGCACCGATTCTTAGGTTCCTCGAGTTAGGCCATAA 781
Query 796 CAATCTCTCCGGGACAATCCCGAACTTCTTATCAAACTTCAAGGCGCTCGACACATTGGA 855
||| ||||||||||| || || ||||| ||||||||||||||||||||||||||||||||
Sbjct 782 CAAACTCTCCGGGACGATTCCAAACTTTTTATCAAACTTCAAGGCGCTCGACACATTGGA 841
Query 856 TCTCTCCAAGAATCGGTTCTCAGGAGTCTTGCCAAAGAGTTTCGCAAATCTGACCAAAAT 915
||||||||||||||||||||| || ||| | || ||||||||||| ||||||||||| ||
Sbjct 842 TCTCTCCAAGAATCGGTTCTCGGGTGTCATACCGAAGAGTTTCGCCAATCTGACCAAGAT 901
Query 916 CTTCAATCTCAATCTCGCTCACAATCTTCTAACTGATCCATTCCCTGTCTTGAACGTTAA 975
|||||||| ||||| | || ||||||||||| ||||||||||||||||||||||||||
Sbjct 902 ATTCAATCTTGATCTCTCCCATAATCTTCTAACCGATCCATTCCCTGTCTTGAACGTTAA 961
Query 976 AGGGATAGAATCTCTGGATCTTTCATACAACCAATTTCACTTGAACACAATTCCTAAATG 1035
||| || |||||| |||||||||| |||||||| ||||||||||| || || || |||||
Sbjct 962 AGGCATTGAATCTTTGGATCTTTCTTACAACCAGTTTCACTTGAATACGATCCCGAAATG 1021
Query 1036 GGTGACTTCGTCACCGATCATCTTCTCGTTGAAGCTAGCAAAATGCGGGATCAAGATGAG 1095
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 GGTGACTTCGTCGCCGATCATCTTCTCGTTGAAGCTAGCAAAATGCGGGATCAAGATGAG 1081
Query 1096 TTTAGACGATTGGAAGCCAGCACAAACATACTACTACGATTTCATCGATTTGTCGGAAAA 1155
|||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||||
Sbjct 1082 CTTAGACGATTGGAAGCCAGCGCAAACATTCTACTATGATTTCATCGATCTGTCGGAAAA 1141
Query 1156 CGAGATCTCAGGGAGTCCTGCAAGGTTCTTGAACCAAACAGAGTTTCTAGTGGAGTTCAA 1215
||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1142 CGAGATCACAGGGAGTCCAGCAAGGTTCTTGAACCAAACAGAGTATCTAGTGGAGTTCAA 1201
Query 1216 GGC-GTCGGGGAACAAACTCCGATTCGATATGGGGAAGCTAACGTTCGCAAAGACGCTGA 1274
||| | |||| |||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1202 GGCAG-CGGGTAACAAACTACGATTCGATATGGGGAAGCTAACGTTTGCAAAGACGCTGA 1260
Query 1275 AAACCTTGGATCTATCAAGAAACTTGGTATTCGGGAAGGTGCCAGCGACAGTGGCCGGGC 1334
||| || ||| ||||||| ||||||||||| ||||||||||| || | ||||| || |
Sbjct 1261 CAACTTTAGATATATCAAGGAACTTGGTATTTGGGAAGGTGCCGGCAATGGTGGCTGGAC 1320
Query 1335 TAAAGACATTGAACGTGAGTCACAACCAACTTTGCGGAAAGCTTCCGGTGACAAAGTTCC 1394
|||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct 1321 TAAAGACATTGAACGTGAGTCACAACCATCTTTGTGGAAAGCTTCCAGTAACAAAGTTCC 1380
Query 1395 CGGCCAGCGCGTTTGCTGG-TAACGACTGTCTTTGCGGCTCTCCACTTCCTCCTTGTAAA 1453
||||||| ||||||| ||| ||| |||||||||||||||||||| ||| |||||||||||
Sbjct 1381 CGGCCAGTGCGTTTG-TGGGTAATGACTGTCTTTGCGGCTCTCCTCTTTCTCCTTGTAAA 1439
Query 1454 GCTTAAGCGGCAAGAAAACTACAA 1477
||||||||||||||||| ||||||
Sbjct 1440 GCTTAAGCGGCAAGAAAGCTACAA 1463
> AT1G33600.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12180776-12182363 FORWARD LENGTH=1588
Length=1588
Score = 1013 bits (548), Expect = 0.0
Identities = 1189/1491 (80%), Gaps = 73/1491 (5%)
Strand=Plus/Plus
Query 26 ATGAACTCTTCTTG-TACTCTCAC-T-ATTTTTACCTTCGTTATCTTTCTCCGGTGTCTA 82
|||||||||| ||| | | ||| | | || ||| | ||||||||||||||||||||| ||
Sbjct 1 ATGAACTCTTGTTGCTTCCCTCTCTTCATCTTTGCATTCGTTATCTTTCTCCGGTGTTTA 60
Query 83 AATCCCACCGGAGCTGCCACGTGTCATCCTGATGATGAAGCGGGTCTTCTAGCTTTTAAA 142
| ||||| | |||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct 61 AGTCCCATTGAAGCTGCCACGTGTCATCCTGATGACGAGGCGGGTCTTTTAGCTTTTAAA 120
Query 143 GCGGGTATAACCCGAGACCCTTCGGGTATTCTCAGTTCTTGGAAGAAAGGTACTG-CTTG 201
|||||||||| | ||| ||| ||||||||||||| ||||||||||||||||||| | ||
Sbjct 121 TCGGGTATAACTCAAGATCCTACGGGTATTCTCAGCTCTTGGAAGAAAGGTACTGAC-TG 179
Query 202 TTGTTCTTGGAACGGTGTCACTTGTCTCACCACTGACCGCGTCTCCGCACTCTCTATC-G 260
||||| ||||| |||||| ||||||||||| |||||||| ||| |||| |||||
Sbjct 180 CTGTTCATGGAAGGGTGTCGGTTGTCTCACCA---ACCGCGTCACCGGACTCACTATCAA 236
Query 261 CTGGACAAGCCGATGTTGCGGGAAGCTTCCTCTCCGGCACTCTCTCGCCGTCGCTAGCTA 320
| |||||| | |||||| | |||||||| || || |||||| |||||||||| | || |
Sbjct 237 C-GGACAATCTGATGTTACTGGAAGCTTTCTTTCTGGCACTATCTCGCCGTCATTGGCCA 295
Query 321 AACTCCAACACCTCGATGGGATTTACTTCACCGATC-TCAAGAACATCACTGGTTCTTTT 379
||||||||||||| | ||| |||||||||||| ||| || | ||||||||||||||||||
Sbjct 296 AACTCCAACACCTTGTTGGTATTTACTTCACCAATCTTCGA-AACATCACTGGTTCTTTT 354
Query 380 CCTCAATTCCTTTTCCAATTACCAAATCTTAAGTTCGTTTACATTGA-GAATAACCGCCT 438
||||||||||||||||||||||||||| | || || ||| || | ||||| ||| ||
Sbjct 355 CCTCAATTCCTTTTCCAATTACCAAATGTAAAACAAGTCTAC-TTCACGAATAGCCGTCT 413
Query 439 CTCCGGTCCTCTTCCGGTTAACATCGGTTCTCTTAGCCAGCTCGAAGCGTTCAGTCTCCA 498
||||||||||||||| | |||||| ||| | || ||| || | | || | |||||| |
Sbjct 414 CTCCGGTCCTCTTCCAGCTAACATTGGTGCGCTAAGCGAGTTAGGAGAACTAAGTCTCGA 473
Query 499 GGGAAACCGGTTCACCGGTCCAATCCCAAGCTCGATTTCTAATTTGACTCGGTTA-ACAC 557
||||||| ||| || ||||| ||||| || || ||||| ||||| || |||||| | |
Sbjct 474 CGGAAACCTGTTTACTGGTCCGATCCCGAGTTCCATTTCCAATTTAACCCGGTTATAT-C 532
Query 558 AACTCAAACTCGGTAG-TAATCTCCTAACCGGCACTATTCCCTTAGGAATTGCCAATCTC 616
||||| || || || ||||||| ||||||| ||||| || ||||| |||| ||||||
Sbjct 533 TGCTCAATCTTGG-AGATAATCTCTTAACCGGAACTATACCTTTAGGTCTTGCTAATCTC 591
Query 617 AAGCTCATGTCCT-ATCTCAACCTTGG-AGGTAACCGGCTCACTGGCACTATCCCGGACA 674
||| || ||| | | |||||| |||| | || || ||| ||| || || ||||| |
Sbjct 592 AAGATCTTGTTGTCA-CTCAACTTTGGCAAC-AATCGTCTCTCTGAAACCATACCGGATA 649
Query 675 TTTTCAAATCCATGCCGGAA-CTTCGATCAT-TAACTCTCTCCCACAACGGATTCTCCGG 732
||||||||||||||| | || || | ||| | |||| ||||||| |||| |||||| ||
Sbjct 650 TTTTCAAATCCATGCAG-AAGCTCCAATC-TCTAACCCTCTCCCGCAACAAATTCTCTGG 707
Query 733 GAATCTTCCTCCGTCCATTGCATCACTCGCACCGATTCTCAGGTT-CCTCGAGT-TAGGC 790
||||||||||||||||||||||||||| ||| ||||||| || |||||| | || ||
Sbjct 708 AAATCTTCCTCCGTCCATTGCATCACTCAAACCAATTCTCAA-TTACCTCGA-TCTAAGC 765
Query 791 CATAACAATCTCTCCGGGACAATCCCGAACTTCTTATCAAACTTCAAGGCGCTCGACACA 850
|| || |||||||| ||||||||||||| ||| |||||||||||||||| || ||| ||
Sbjct 766 CAGAATAATCTCTCTGGGACAATCCCGACCTTTTTATCAAACTTCAAGGTACTAGACTCA 825
Query 851 TTGGATCTCTCCAAGAA-TCGGTTCTCAGGAGTC-TTGCCAAAGAGTTTCGCAAATCTGA 908
|||||||| || | ||| | ||||||| || || || || |||||||| || ||| ||
Sbjct 826 TTGGATCTTTCTA-GAAATAGGTTCTCTGGGGTTGTT-CCGAAGAGTTTAGCCAATATG- 882
Query 909 CCAAAA-TCTTCAATCTCAATCTCGCTCACAATCTTCTAACTGATCCATTCCCTGTCTTG 967
|| ||| | ||| ||||||||||| | |||||| ||||||||| |||| |||||| | ||
Sbjct 883 CCTAAACTTTTCCATCTCAATCTCTCCCACAATTTTCTAACTGGTCCACTCCCTGCCATG 942
Query 968 AA---CGTTAAAGGGATAGA-ATCTCTGGATCTTTCATACAACCAATTTCACTTGAACAC 1023
|| |||| | || | | | |||| |||||||||||||||||||||||| | || ||
Sbjct 943 AAGAACGTTGATGGCCTTGCCA-CTCTAGATCTTTCATACAACCAATTTCACCTCAAAAC 1001
Query 1024 AATTCCTAAATGGGTGACTTCGTCACCGATC-ATCTTCTCGTTGAAGCTAGCAAAATGCG 1082
|| || ||||||||||| ||||| ||| || || | |||||||||||| | ||||||||
Sbjct 1002 GATACCGAAATGGGTGACCTCGTCGCCG-TCCATGTACTCGTTGAAGCTGGTAAAATGCG 1060
Query 1083 GGATCAAGATGAGTTTAGACGATTGGAAGCCAGC-ACAAACATACTACT-ACGATTT-CA 1139
||||||| ||||| |||||| |||||||||||| | | || | || | || ||| ||
Sbjct 1061 GGATCAATATGAGCTTAGACAATTGGAAGCCAGTGAGACCCA-A-TATTTACT-TTTACA 1117
Query 1140 TCGATTTGTCGGAAAACGAGATCTCAGGGAGTCCTG-CAAGGTTCTTGAACCAAAC--AG 1196
||||| |||| |||||||||||||||||||||| | || ||||||| |||| | | |
Sbjct 1118 TCGATCTGTCAGAAAACGAGATCTCAGGGAGTC-TAACATGGTTCTTCAACCTAGCGCAT 1176
Query 1197 AGTTTCTAGTGGAGTT-CAAGGCGTCGGGGAACAAACTCCGATTCGATATGGGGAAGCT- 1254
| | || || |||| |||| |||| ||||||||||| |||||||| |||||||||||
Sbjct 1177 AACCTATA-TG-AGTTTCAAG-CGTCAGGGAACAAACTTCGATTCGACATGGGGAAGCTG 1233
Query 1255 AACGTTC-GCAA-AGACGCTGAAAACCTTGGATCTATCAAGAAACTTGGTATTCGGGAAG 1312
|| || | | |||| |||| ||| | |||||||||| || ||| |||| ||||||
Sbjct 1234 AAT-TTAAGTGAGAGACTA-GAAAGCCTCG-ATCTATCAAGGAATTTGATATTTGGGAAG 1290
Query 1313 GTGCCAGCGACAGTGGCCGGGCT--AAAGACATTGAACGTGAGTCACAACCAACTTTGCG 1370
|| ||| ||| ||||| || ||| | ||||||| ||||||| ||||| ||||| |
Sbjct 1291 GTACCAATGACCGTGGCTAAACTGCAAA-A-ATTGAACTTGAGTCATAACCATCTTTGTG 1348
Query 1371 GAAAGCTTCCGGTGAC-AAAGTTCCCGGCCAGCGCGTTTG-CTGGTAACGACTGTCTTTG 1428
|||||||||| ||||| ||| ||||||||||||||||||| | ||||| |||||||| ||
Sbjct 1349 GAAAGCTTCCAGTGACTAAA-TTCCCGGCCAGCGCGTTTGTC-GGTAATGACTGTCTCTG 1406
Query 1429 CGGCTCTCCACTTCCTCCTTGTAAAGCTTAAGCGGCAAGAAAACTACAATT 1479
||||||||| ||| ||||||||||| ||| ||||||| ||| |||||||
Sbjct 1407 CGGCTCTCCGCTTTCTCCTTGTAAAATTTA-GCGGCAA-AAAGGTACAATT 1455
> AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12188910-12190418 FORWARD LENGTH=1509
Length=1509
Score = 843 bits (456), Expect = 0.0
Identities = 1143/1463 (78%), Gaps = 93/1463 (6%)
Strand=Plus/Plus
Query 63 TTATCTTTCTCCGGTGTCTAAATCCCACCGGAGCTGCCACGTGTCATCCTGATGATGAAG 122
||| |||||| | ||| ||| | | ||||||||||||||||||||||||||||| || |
Sbjct 41 TTACCTTTCTACAATGTTTAAGTTCAACCGGAGCTGCCACGTGTCATCCTGATGACGAGG 100
Query 123 CGGGTCTTCTAGCTTTTAAAGCGGGTATAACCCGAGACCCTTCGGGTATTCTCAGTTCTT 182
|||||||| ||||||| ||| | |||||||| | ||| |||||||| || ||||| ||||
Sbjct 101 CGGGTCTTTTAGCTTTCAAATCCGGTATAACACAAGATCCTTCGGGCATGCTCAGCTCTT 160
Query 183 GGAAGAAAGGTACTGCTTGTTGTTCTTGGAACGGTGTCACTTGTC-TCACCACTGACCGC 241
||||||| |||||| |||| || || ||||| ||| ||| ||| | | | || |||||||
Sbjct 161 GGAAGAAGGGTACTTCTTGCTGCTCGTGGAAAGGTATCATTTG-CTTTAACAGTGACCGC 219
Query 242 GTCTCCGCACTCTCTA-TCGCT-GGACAAGCCGATGTTGCGGGAAGC-TT-CCTCTCCGG 297
||| || || | | | | | ||| || | | ||| | || |||||||||
Sbjct 220 GTCACCATGCT-TGAACTAG-TAGGA-TTTCCCAAAAAACCCGAA-CGTTCCCTCTCCGG 275
Query 298 CACTCTCTCGCCGTCGCTAGCTAAACTCCAACACCTCGATG-G-GATTTA-CTTCACCGA 354
||||||||| ||||||||||| |||||||| ||||| | | | || ||| ||| | ||
Sbjct 276 CACTCTCTCACCGTCGCTAGCCAAACTCCAGCACCT--AAGCGTGA-TTAGCTT-A-GGA 330
Query 355 TCTCA--AGAACATCACTGGTTCTTTTCCTCAA-TTCCTTTTCCAATTACCAAATCTTAA 411
||| |||||||||||| ||||||||| || |||||| ||||||||||||| | |||
Sbjct 331 GGTCATGTGAACATCACTGGATCTTTTCCT-AAGTTCCTTCTCCAATTACCAAAGC-TAA 388
Query 412 -GTTCGTTTACATTGAGAATAACCGCCTCTCCGGTCCTCTTCCGGTTAACATCGGTTC-T 469
|| |||| |||| | |||||||| ||||||||||| ||||||| ||||||||| | |
Sbjct 389 GGTACGTTGACATCCAAAATAACCGTCTCTCCGGTCCACTTCCGGCTAACATCGG--CGT 446
Query 470 -CTTAGCCAGCTCGAAGCGTTCAGTCTCCAGGGAAACCGGTTCACCGGTCCAATCCC-AA 527
|| ||| | | |||| || ||| || ||||| |||||||||||| ||||| ||
Sbjct 447 GCTAAGCTTGTTGGAAGAAATCTTTCTTCAAGGAAATAAGTTCACCGGTCCCATCCCGAA 506
Query 528 GCTCGATTTCTAATTTGACTCGGTTAACACAACTCAAACTCGGTAGTAATCTCCTAACCG 587
|||||| || ||| | ||||| ||| | | |||| | || |||||||||||||||
Sbjct 507 -CTCGATATCGAATCTAACTCGATTATCTTATCTCATTTTTGGCGGTAATCTCCTAACCG 565
Query 588 GCACTATTCCCTTAGGAATTGCCAATCTCAAGCTCATGTC-CTATCT-CAACCTTGGAGG 645
| ||||| |||||||| ||||| ||||||||||||||| | |||| ||| || || |
Sbjct 566 GGACTATACCCTTAGGGATTGCTAATCTCAAGCTCATG-CAGAATCTGCAA-CTCGGCGA 623
Query 646 TAACCGGCTCACTGGCACTATCCCGGACATTTTCAAATCCATGCCGGAACTTCGATC--A 703
||||| ||| ||||||| |||||||| |||||| ||||||| ||| || | || |
Sbjct 624 CAACCGCCTCTCTGGCACCATCCCGGATATTTTCGAATCCAT----GAAGTT-GCTCAAA 678
Query 704 TTAACTC--TCTC-CCA-CAACGGATTCTCCGGGAATCTTCCTCCGTCCATTGCAT-CAC 758
|| ||| |||| ||| ||||| ||||| |||||| ||||||| || ||||| | |||
Sbjct 679 TT-TCTCGATCTCTCCAGCAACGAATTCTACGGGAAACTTCCTCTATCGATTGC-TACAC 736
Query 759 TCGCACCGATTCT-CAGGTTCCT-CGAGTTAGGCCATAACAATCTCTCCGGGACAATCCC 816
| ||||||| || | || ||| | ||| | |||| ||||||||||| ||| | |||||
Sbjct 737 TGGCACCGACACTCCTGG-CCCTCCAAGTGA-GCCAGAACAATCTCTCTGGGGCGATCCC 794
Query 817 GAACTTCT-TATCAA-ACTTCAAGGCGCTCGACACA-TTGGATCTCTCCAAGAATCGGTT 873
||| | | |||||| | ||||| ||| || | | || |||||||||||||| |||||
Sbjct 795 AAAC-TATATATCAAGA-TTCAACAAGCTTGA-AAAGTTAGATCTCTCCAAGAACCGGTT 851
Query 874 CTCAGGAGTCT-TGCC-AAAGAGTTTCG-CAAATCTGACCAAAATCT-TCAATCTCAATC 929
||| || || | |||| ||| |||||| | ||||| ||||| || | |||||| |||
Sbjct 852 CTCGGGGGT-TGTGCCTCAAG-GTTTCGTC-AATCTCACCAATAT-TAACAATCTTGATC 907
Query 930 TCGCTCACAATCTTCTAACTGATCCATTCCCTGTCTTGAACGTTAA-AGGGATAGAATCT 988
|| |||||||||||||||| | || ||| |||| ||||| ||| || | || |||| |
Sbjct 908 TCTCTCACAATCTTCTAACCGGTCAATTTCCTGACTTGACCGTCAACA-CTATCGAATAT 966
Query 989 CTGGATCTTTCATACAACCAATTTC-ACTTGAACACAATTCCTA-AATGGGTGA-CTTCG 1045
|| ||||| || ||||||||||||| ||| ||| || ||||| | ||||||||| ||| |
Sbjct 967 CTTGATCTCTCTTACAACCAATTTCAACTAGAA-ACGATTCC-ACAATGGGTGACCTT-G 1023
Query 1046 TCACCGATCATCTTCTCGTTGAAGCTAGCAAAATGCGGGATCAAGATGAGTTTAGACGAT 1105
| |||| | |||||| ||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1024 TTGCCGAGCGTCTTCTTGTTGAAGCTAGCAAAATGCGGGATCAAGATGAGCTTAGATGAT 1083
Query 1106 TGGAAGCCAGCACAAACATACTACTACGATTTCATCGATTTGTCGGAAAACGAGATCTCA 1165
||||||||||| || | | |||||| ||| ||| ||||||||| ||||||||||||||
Sbjct 1084 TGGAAGCCAGCGGAACCGTTGTACTACCATTACATTGATTTGTCGAAAAACGAGATCTCA 1143
Query 1166 GGGAGTCCT-GCAAGGTTCTTGAACCAAACAGAGTT-TCTAG-TGGAGTT-CAAGGCGTC 1221
||||||| | | ||||||||||||| | || ||| | ||| | | ||||| | |||| |
Sbjct 1144 GGGAGTC-TAGAAAGGTTCTTGAACGAGAC-GAGGTATCT-GCTTGAGTTTCG-GGCGGC 1199
Query 1222 GGGGAACAAACTCCGATTCGATATGGGGAAGCTAACGTT-CGCAAAGACGCTGAAAACCT 1280
|| ||||||||| ||||||||||||||||| |||||||| | | | ||| || ||||| |
Sbjct 1200 GGAGAACAAACTTCGATTCGATATGGGGAACCTAACGTTTC-CGAGGACACTAAAAACTT 1258
Query 1281 TGGATCTATCAAGAAACTTGGTATTCGGGAAGGTGCCAG-CGACAGTGGCCGGGCTA-AA 1338
||||||| ||||| ||||||||||| || |||||||| | | || ||||| || ||| ||
Sbjct 1259 TGGATCTGTCAAGGAACTTGGTATTTGGTAAGGTGCCTGTC-ACGGTGGCTGGTCTACAA 1317
Query 1339 -GACATTGAACGTGAGTCACAACCAACTTTGCGGA-AAGCTTCCGGTGACAAAGTTCCCG 1396
||| | ||| | ||||| ||||| ||||| ||| || ||||| |||||||||||||
Sbjct 1318 AGAC-TA-AACTTAAGTCAAAACCATCTTTGTGGAGAA-CTTCCTACGACAAAGTTCCCG 1374
Query 1397 GCCAGCGCGTTTGCTGGTAACGACTGTCTTTGCGGCTCTCCACTTCCTCCTTGTAAAGCT 1456
|| ||||| || || ||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1375 GCTAGCGCCTTCGCCGGTAACGACTGTCTTTGTGGCTCTCCACTTTCTCCTTGTAAAGCT 1434
Query 1457 TAAGCGGCAAGAAAACTACAATT 1479
|| | ||||| ||||||||||
Sbjct 1435 TA-GTAACAAGAGAACTACAATT 1456
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72941391885
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5