BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922460
Length=1403
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33612.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 835 0.0
AT1G33670.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 643 0.0
AT1G33590.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 503 2e-141
AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 464 9e-130
> AT1G33612.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12191312-12192849 FORWARD LENGTH=1538
Length=1538
Score = 835 bits (452), Expect = 0.0
Identities = 1116/1426 (78%), Gaps = 90/1426 (6%)
Strand=Plus/Plus
Query 21 ATGAACTCTTACTCTTTCACTCTCTTCATCTTTGCCGCCATTATCTTTCTCCGGTGTTCA 80
|||||||||| ||| |||| | | |||||||| | || |||||||||||||||||||
Sbjct 1 ATGAACTCTTGCTCCTTCAATTTATTCATCTTAGGTGCTATTATCTTTCTCCGGTGTTTT 60
Query 81 AGTTCGACCAAAGCTGCCACTTGTCACCCTGATGATGAGGCGGGTCTTTTAGCTTTCAAA 140
|||| ||| ||||||||| ||| | |||||||| || ||||||||||||| |||||||
Sbjct 61 CGTTCCACCGGAGCTGCCACGTGTGATCCTGATGACGAAGCGGGTCTTTTAGGTTTCAAA 120
Query 141 TCGGGTATAACCCAAGATCCTTTGGGCCA-TCTGAACTCGTGGAAGAAAGGTACTGATTG 199
|||||||||||| ||||||||| ||| || ||| | ||| ||||||||||||||||| ||
Sbjct 121 TCGGGTATAACCAAAGATCCTTCGGG-CATTCTCAGCTCATGGAAGAAAGGTACTGACTG 179
Query 200 CTGCTCATGG-GTGGCTGT-TACTTGCACT-AGGGGCAATCGCGTCACTGAACTAAACCT 256
||||| ||| | || ||| | |||| | | | | |||||||| |||||| |
Sbjct 180 CTGCTTTTGGAGCGG-TGTCT-TTTGC-GTCAACAACGACCGCGTCACACAACTAAGTGT 236
Query 257 AGACGGA-TC-TAGCGTTCTTGGCGGAATCTTTCTCTCTGGCACTATCTCCCCGTTGTTG 314
|| ||| | | | ||||| ||||| || || ||| ||||||||||| ||| || ||
Sbjct 237 GGATGGAGACTTTTC--TCTTGACGGAAACTCTCCCTCCGGCACTATCTCGCCGATGCTG 294
Query 315 ACCAAACTTCAACACCTTGAG-GTGATTTCCT-TAATCTCTTTTCGAAAGATGACTGGCT 372
|||||||||||||||| ||| | || ||| | | | |||| |||||||||| ||||| |
Sbjct 295 GCCAAACTTCAACACCTCGAGAG-GA-TTCTTCTCACCTCTCTTCGAAAGATTACTGG-T 351
Query 373 -CTTTTCCTCTGTTTC-TTTTTCGATTACCAAAGCTAAGGTACCTTAAA-AT-CATGAAT 428
||||||||| ||| |||| |||||||||||||||| || | |||| || || | |
Sbjct 352 CCTTTTCCTC-AATTCATTTTCCGATTACCAAAGCTAAATTA-CATAAACATCCAAG-GT 408
Query 429 AATCATCTCCCCGGTCCACTTCCAGCCAACATCGGC-ACGCTACA-CCAGTTGGAAGAC- 485
| |||| | ||||| |||||||||||||||||| | |||| | || || ||| ||
Sbjct 409 TGCCTTCTCTCTGGTCCCCTTCCAGCCAACATCGGCGA-GCTA-AGTCAATT-GAAAACT 465
Query 486 CTAATTCTCGAGGGAAACCA-GTTCACTGGTCAGATCCCGAGTTCCATATCCAATTTGAC 544
|| || |||| ||||| || |||||| ||||| || || ||||| ||| ||||||||||
Sbjct 466 TTAGTTATCGACGGAAA-CATGTTCACGGGTCATATTCCAAGTTCGATAGCCAATTTGAC 524
Query 545 TAGGTT-ATTTCGGCTCAATCTTGGCGGCAACCGCCTCTCTGGCACCA-TCTCAGATATA 602
| |||| | || |||| || || ||| |||||||||||||||||||| || || | |||
Sbjct 525 TCGGTTAACTT-GGCTTAACCTCGGCAACAACCGCCTCTCTGGCACCATTC-CAAACATA 582
Query 603 TTTAAACCCATG-ACGAACCTCCAA--CATCTTGATCTCTCCCGCAACGGA-TTCTCTGG 658
|||||| ||||| | | | || ||| | |||||||||||||||||||||| || || ||
Sbjct 583 TTTAAATCCATGAAAG-AGCT-CAATTC-TCTTGATCTCTCCCGCAACGGATTTTTC-GG 638
Query 659 GAAACTTCCTCCATCGTTTTCATCGCTTGCACCGACCCTCAAATATCTCGATCTGAGCCA 718
|| ||||||||| ||| || | ||||||||||| || ||| | || ||||||||||||||
Sbjct 639 GAGACTTCCTCCGTCGATTGCTTCGCTTGCACCAACTCTCTATTACCTCGATCTGAGCCA 698
Query 719 GAACAATCTCTCGGGAACGATTCCGGACTATTTATCAAGATTCGAGACGCTTTCCACATT 778
||||||||||||||| ||||| || ||||||||||||| || ||| |||| ||||||||
Sbjct 699 GAACAATCTCTCGGGGACGATCCCAAACTATTTATCAAGGTTTGAGGCGCTCTCCACATT 758
Query 779 GGTTCTCTCCAAGAATCAGTACTCGGGGGTTGTGCCAACGAGTTTCGCTAATTTAACCAG 838
||| ||||| |||||| ||||||||||||| ||||||| ||||||| | ||| | | ||
Sbjct 759 GGTACTCTCGAAGAATAAGTACTCGGGGGTCGTGCCAATGAGTTTCACCAATCTGATCAA 818
Query 839 TATTTACTA-TCTCGATCTCTCCCACAATCT-CTTAACCGGTCCATTCCATGCCTTGAAG 896
||| || | ||| ||||||||||||||||| || ||| |||||||||| || |||||
Sbjct 819 CATT-ACCAATCTTGATCTCTCCCACAATCTTCT-AACTGGTCCATTCCCTGTATTGAAA 876
Query 897 AGTAGCATCGGC-T--A-TCT-TG-ATCTATCGTACAACCAA-TTTAACCTGAAAACCAT 949
|| | | |||| | | ||| || || | ||||||||| || ||| |||||||||| ||
Sbjct 877 AGCATTAACGGCATTGAATCTCTGGATTTGTCGTACAAC-AAGTTTCACCTGAAAACGAT 935
Query 950 TCCGGAATGGGTGACCTCGTCGACGAGTT--TGTACTCACTAAAGTTGGCTAAATGCAGT 1007
||| ||||| ||| ||||| || | | | |||||| | |||||||| ||||| |
Sbjct 936 TCCAAAATGGATGATATCGTC-ACCA-TCCATCTACTCATTGAAGTTGGCAAAATGTGGG 993
Query 1008 ATCAAGATGAA-CTTA-AGCGATTGGAGGCCAGTGAAG-ACCAAATTGT-TCAATAACAT 1063
| ||||| || |||| | ||||||| || || | | ||| | | | | | | |||
Sbjct 994 CTGAAGAT-AAGCTTAGAT-GATTGGAAGCTAGC-AGGGACCTACTACTATGATTC-CAT 1049
Query 1064 CGATCTGTCCGAAAACGAGTTCTCAGGGAGTCCAAC-ATGGTTCCTAAACAAGACGGAGG 1122
||||||||| ||||||||| ||||||||||||| | | | ||||| | | ||| | ||
Sbjct 1050 CGATCTGTCTGAAAACGAGATCTCAGGGAGTCCGGCTAAG-TTCCTCAGCCAGATGAAGT 1108
Query 1123 ATCT-ATTGGAGTTCC-AGGCGTC-GGGAAACAAACTCCAATTTGACATGGGGAAGTTGA 1179
|||| || |||||||| || || | ||||| |||||||| ||| || |||||||| |||
Sbjct 1109 ATCTGAT-GGAGTTCCGAG-CGGCAGGGAA-CAAACTCCGATTCGATTTGGGGAAGCTGA 1165
Query 1180 -GTTTCGCAAAGTCACTTAGAATC-TTGGATCTATCAAGGAACTTGGTATTTGGGA-AGG 1236
|||| | | | | ||| ||| | |||||| | |||||||||||| |||| |||| ||
Sbjct 1166 CGTTT-GTGAGGACTCTT-GAAACCTTGGATTTGTCAAGGAACTTGATATTCGGGAGAG- 1222
Query 1237 TGCCATGG-A-CAGTGGCTAAACTGAAGA-AACTAAATTTGAGTCAAAATCATCTTTGTG 1293
||| ||| | || | ||| |||||||| || | || |||||||||| |||||||| |
Sbjct 1223 TGC--TGGCAACATTTGCTGGACTGAAGACAA-TGAACGTGAGTCAAAACCATCTTTGCG 1279
Query 1294 GAAAGCTTCCGGTGACAAAGTTCCCGGCCAGCGCGTTTGCGGGTAACGACTGTCTTTGTG 1353
|||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1280 GAAAACTTCCGGTGACAAAGTTCCCGGCCAGTGYGTTTGCGGGTAACGACTGTCTTTGTG 1339
Query 1354 GCTCTCCACTTTCTCCTTGTAAAGCT-TAGCGGCAATATATCTATA 1398
|||||||||||||||||||||||| | ||| ||||| | | |||||
Sbjct 1340 GCTCTCCACTTTCTCCTTGTAAAG-TGTAGTGGCAAGAAAACTATA 1384
> AT1G33670.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12201963-12203408 FORWARD LENGTH=1446
Length=1446
Score = 643 bits (348), Expect = 0.0
Identities = 1071/1410 (76%), Gaps = 90/1410 (6%)
Strand=Plus/Plus
Query 21 ATGAACTCTTACTCTTTCACTCTCTTCATCTTTGCCGCCATTATCTTTCTCCGGTGTTCA 80
|||||||||| || ||| |||||||| ||||| | |||||||||||||||||| |
Sbjct 1 ATGAACTCTTGTTCCTTCCCTCTCTTCCTCTTT---G---TTATCTTTCTCCGGTGTTTA 54
Query 81 AGTTCGACCAAAGCTGCCACTTGTCACCCTGATGATGAGGCGGGTCTTTTAGCTTTCAAA 140
||||| || ||||||||| ||||| |||||||| | |||||||||||||||||||||
Sbjct 55 AGTTCCACGGGAGCTGCCACATGTCATCCTGATGACAAAGCGGGTCTTTTAGCTTTCAAA 114
Query 141 TCGGGTATAACCCAAGATCCTTTGGGCCAT-CTGAACTCGTGGAAGAAAGGTACTGATTG 199
|||||||||||||||||||||| ||| || || | ||| ||| |||||| || ||| ||
Sbjct 115 TCGGGTATAACCCAAGATCCTTCGGGT-ATTCTCAGCTCATGGCAGAAAGATATTGACTG 173
Query 200 CTGCTCATGGGT--GG---CTGTTACTTGC--AC--T--AGGGGCAATCGCGTCAC--TG 246
|||||| ||| | || || || | | | || | | || | | |||||||| ||
Sbjct 174 CTGCTCCTGG-TACGGTATCTTTTGCCTCCCTACGATTCATGG-CGACCGCGTCACCATG 231
Query 247 AACTAAACCT-AGACGGATCTAGCGT-TCTTGGCGGAATCTTTCTCTCTGGCACTATCTC 304
| | | | ||||||| || || | |||| | || ||||||||| |||||||||||
Sbjct 232 A--TGG-CATTAGACGGAAATA-CGGATGTTGGTGAAACCTTTCTCTCCGGCACTATCTC 287
Query 305 CCCGTTGTT-GACCAAACTTCAACACCTTGAGGTGATTT-CCTTAATCTCTTTTCGAAAG 362
|||||| | | ||||||| || ||||| | | |||| ||| | | | ||||||||
Sbjct 288 ACCGTTGCTCG-CCAAACTCCATCACCTCAACGAGATTCGCCTCAC-CAATCTTCGAAAG 345
Query 363 ATGACTGGCTCTTTTCCTCTGTTTCTTTTTCGA-TTACCAAAGCTAAGGTACC-TTAAAA 420
|| ||||| |||||||| | || || || | | ||||||||||||||| || || |
Sbjct 346 ATCACTGGATCTTTTCCCCACTTCCTCTT-CAAATTACCAAAGCTAAGG-ACTGTTTACT 403
Query 421 TC-ATGAATAATCATCTCCCCGGTCCACTTCCAGCCAACATCGGCACGCTACACCAGTT- 478
| | |||||| | |||| | ||||| ||||| ||||||||||| | ||| | | ||
Sbjct 404 TAGA-GAATAACCGTCTCTCTGGTCCCCTTCCTGCCAACATCGGTGCACTA-AGTAATTT 461
Query 479 GGAAGACCTA-ATTCTCGAGGGAAACCAGTTCA-CTGGT-CAGATCCCGAGTTCCATATC 535
|||| | | | | | | |||||||| ||||| | ||| | |||||| ||||| || ||
Sbjct 462 GGAA-ATTTTGAGTGTGGCGGGAAACCGGTTCAGC-GGTTC-GATCCCAAGTTCGATGTC 518
Query 536 CAATTTGACTAGGTTATTTCGGCTCAATCTTGGCGGCAACCGCCTCTCTGGCACCATCTC 595
|| || ||||| ||| | | ||||| || ||| |||||||| ||||||| | || |
Sbjct 519 TAAGTTAACTAGCTTACTCCAACTCAAGCTCAACGGTAACCGCCTTTCTGGCATCTTCCC 578
Query 596 AGATATATTTAAACCCATGACG--AACCTCCAACATCTTGATCTCTCCCGCAACGGATTC 653
||| ||||| ||| ||||| || ||| || | ||||||||||||| ||||| |||||
Sbjct 579 AGACATATTCAAATCCATG-CGGCAACTTCGATT-TCTTGATCTCTCCAGCAACAGATTC 636
Query 654 TCTGGGAAAC-TTCCTCCATCGTTTTCATCGCTTGCACCGACCCTCAAATATC-TCGATC 711
||||| |||| ||||| ||||| || |||| ||||||||||| || || | | ||
Sbjct 637 TCTGG-AAACCTTCCTTCATCGATTGCATCTCTTGCACCGACTCTTTC-TACCCTTGAGG 694
Query 712 TGAGCCAGAACAATCTCTCGGGAACGATTCCGGACTATTTATCAAGATTCGAGACG-CTT 770
|| |||| ||||| || ||||| || || |||||||||||||| ||||||||| | ||
Sbjct 695 TGGGCCATAACAAGCTATCGGGGACTATCCCGGACTATTTATCGAGATTCGAG-CTTCTC 753
Query 771 TCCACATTGGTTCTCTCCAAGAATCAGTACTCGGGGGTTGTGCCAACGAGTTTCGCTAAT 830
||| |||| |||||| | |||| |||| | ||||| ||||| | |||||| || |||
Sbjct 754 TCCGCATTAAATCTCTCTAGGAATGGGTACACAGGGGTCGTGCCGATGAGTTTTGCCAAT 813
Query 831 TTAACCAGTATT-TACTATCTCGATCTCTCCCACAATCT-CTTAACCGGTCCATTCCATG 888
| |||| ||| | || ||| ||||||||||||||||| |||| |||||||||||| ||
Sbjct 814 CTGACCAACATTAT-CTTTCTTGATCTCTCCCACAATCTGCTTA-CCGGTCCATTCCCTG 871
Query 889 CCTTGAAG--AGTAG-CATCGGCTATCTTGATCTATCGTACAACCAATTTAACCT-GAAA 944
|||||| | ||| ||||| ||||| |||| |||||||||| |||| |||| ||||
Sbjct 872 TCTTGAACTCATTAGGCATCGAATATCTACATCTTTCGTACAACCGATTTCACCTTGAAA 931
Query 945 ACCATTCCGGAATGGGTGACCTCGTCGACGAGTT--TGTACTCACTAAAG-TTGGCTAAA 1001
| || || ||||||||||||| ||||| |||| | |||||| | ||| ||| | |||
Sbjct 932 -CAATCCCCGAATGGGTGACCTTGTCGA--AGTTCATCTACTCATTGAAGCTTG-CAAAA 987
Query 1002 TGCAGTATCAAGATGAACTTA-AGCGATTGGAGGCCAGT-GAAGACCAAATTGTTCAATA 1059
|| | ||||| |||| |||| | | |||||| ||||| || ||| || | | ||
Sbjct 988 TGTGGGATCAAAATGAGCTTAGACC-ATTGGATGCCAGCAGAC-ACCTCTTTCTACCATC 1045
Query 1060 ACATCGATCTGTCCGAAAACGAGTTCTCAGGGAGTCCAACATGGTTCCTAAACAAGACGG 1119
|||| ||| | || ||||||||| ||||||||||||||| | |||| | ||| ||| ||
Sbjct 1046 ACATTGATTTTTCGGAAAACGAGATCTCAGGGAGTCCAATAAGGTTTTTTAACCAGATGG 1105
Query 1120 AGGATCTAT--TGGAGTTCCAGGCGTCGGGAAACAAACTCCAATTTGACATGGGGAAGTT 1177
| | ||| |||||||||| || |||| ||||||||||| || ||| |||||||| |
Sbjct 1106 ATT-T-TATGGTGGAGTTCCATGCACCGGGGAACAAACTCCAGTTCGACTTGGGGAAGCT 1163
Query 1178 GA-GTTTCGCAAAGTCACTT-AGAATCTTGGATCTATCAAGGAACTTGGTATTTGGGAAG 1235
| |||| | || | ||| | || | ||||| | ||||||||||||||||||||||||
Sbjct 1164 AAAGTTTGG-AATCTT-CTTGAAAACCCTGGATTTGTCAAGGAACTTGGTATTTGGGAAG 1221
Query 1236 GTGCCA-TGGACAGTGGCTAAACTGAAGAAACTAAATTTGAGTCAAAATCATCTTTGTGG 1294
|| || || || ||| | | |||| ||| |||||| ||||||||||| |||||||| ||
Sbjct 1222 GTACCGGTG-ACGGTGACCAGACTGCAGACACTAAACTTGAGTCAAAACCATCTTTGCGG 1280
Query 1295 AAAGCTTCCGGT-GACAAAGTTCCCGGCCAGCGCGTTTG-CGGGTAACGACTGTCTTTGT 1352
||||||||| | ||||||||||||||| || || |||| || |||| | ||||||||
Sbjct 1281 AAAGCTTCCA-TCGACAAAGTTCCCGGCTAGTGCTTTTGTCGA-TAACAAGTGTCTTTGC 1338
Query 1353 GGCTCTCCACTTTCTCCTTGTAAAGCTTAG 1382
|||| |||||||||||||||||||||||||
Sbjct 1339 GGCTTTCCACTTTCTCCTTGTAAAGCTTAG 1368
> AT1G33590.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12177777-12179413 FORWARD LENGTH=1637
Length=1637
Score = 503 bits (272), Expect = 2e-141
Identities = 677/864 (78%), Gaps = 62/864 (7%)
Strand=Plus/Plus
Query 558 CTCAATCTTGGCGGCAACCGCCTCTCTGGCACCA-TCTCAGATATATTT-AAACCCATGA 615
||||| ||||| || ||||| ||| |||| |||| || ||||||| ||| ||| |||||
Sbjct 618 CTCAACCTTGGAGGTAACCGTCTCACTGGAACCATTC-CAGATAT-TTTCAAATCCATG- 674
Query 616 CGA-ACCTCCAACATC-TTGA-TCTCTCCCGCAACGGATTCTCTGGGAAACTTCCTCCAT 672
| | | |||| ||| || | ||||||||||||||||||||| ||||| |||||||| |
Sbjct 675 CCAGAGCTCC--GATCTTTAACTCTCTCCCGCAACGGATTCTCCGGGAATCTTCCTCCGT 732
Query 673 CGTTTTCATCGCTTGCACCGACCCTCAAATAT-CTCGATCTGA-GCCAGAACAATCTCT- 729
| || |||| || ||||||| || | | | ||||| | | |||| ||||| ||||
Sbjct 733 CCATTGCATCACTCGCACCGATTCTTAGGT-TCCTCGA-GTTAGGCCATAACAAACTCTC 790
Query 730 CGGGAACGATTCCGGACTATTTATCAAGA-TTCGAGACGCTTTCCACATTGGTTCTCTCC 788
|||| |||||||| ||| |||||||| | ||| || |||| |||||||| |||||||
Sbjct 791 CGGG-ACGATTCCAAACTTTTTATCAA-ACTTCAAGGCGCTCGACACATTGGATCTCTCC 848
Query 789 AAGAATCAGTACTCGGGGGTTGTGCC-AACGAGTTTCGCTAATTTAACC-AGTAT-TTAC 845
||||||| || |||||| || | || || ||||||||| ||| | ||| || || || |
Sbjct 849 AAGAATCGGTTCTCGGGTGTCATACCGAA-GAGTTTCGCCAATCTGACCAAG-ATATT-C 905
Query 846 TATCTCGATCTCTCCCACAATC-TCTTAACCGGTCCATTCCATGCCTTGAAGAG-T--A- 900
|||| ||||||||||| |||| || |||||| |||||||| || |||||| | | |
Sbjct 906 AATCTTGATCTCTCCCATAATCTTC-TAACCGATCCATTCCCTGTCTTGAA-CGTTAAAG 963
Query 901 GCATCGGCTATC-TT-GATCTATCGTACAACCAATTTAACCTGAAAACCATTCCGGAATG 958
|||| | ||| || ||||| || |||||||| ||| || |||| || || ||| ||||
Sbjct 964 GCAT-TG-AATCTTTGGATCTTTCTTACAACCAGTTTCACTTGAATACGATCCCGAAATG 1021
Query 959 GGTGACCTCGTCGACGAGT-TTGTACTCACTAAAGTTGGCTAAATGCAGTATCAAGATGA 1017
|||||| |||||| ||| | | | ||| | ||| | || |||||| | ||||||||||
Sbjct 1022 GGTGACTTCGTCGCCGA-TCATCTTCTCGTTGAAGCTAGCAAAATGCGGGATCAAGATGA 1080
Query 1018 ACTTAAG-CGATTGGAGGCCAGTG-AAGACCAAATTGTTC-A--ATAACATCGATCTGTC 1072
||| || |||||||| ||||| | || | | ||| | | | || ||||||||||||
Sbjct 1081 GCTT-AGACGATTGGAAGCCAGCGCAA-A-C--ATTCTACTATGATTTCATCGATCTGTC 1135
Query 1073 CGAAAACGAGTTCTCAGGGAGTCCAACATGGTTCCT-AAACAAGACGGAGGATCTATTGG 1131
||||||||| || ||||||||||| || ||||| | || ||| || ||| ||||| |||
Sbjct 1136 GGAAAACGAGATCACAGGGAGTCCAGCAAGGTTCTTGAACCAA-ACAGAGTATCTAGTGG 1194
Query 1132 AGTTCCAGGC-GTCGGGAAACAAACTCCAATTTGACATGGGGAAGTTGA-GTTTCGCAAA 1189
||||| |||| | |||| |||||||| | ||| || ||||||||| | | |||| |||||
Sbjct 1195 AGTTCAAGGCAG-CGGGTAACAAACTACGATTCGATATGGGGAAGCTAACGTTT-GCAAA 1252
Query 1190 GTCACTTAGAATC-TTGGATCTATCAAGGAACTTGGTATTTGGGAAGGTGCCATGGACA- 1247
| | || | || | || ||| ||||||||||||||||||||||||||||||| || ||
Sbjct 1253 GACGCTGACAA-CTTTAGATATATCAAGGAACTTGGTATTTGGGAAGGTGCC--GG-CAA 1308
Query 1248 -G-TGGCTAAACTGAAGAAACTAAATTTGAGTCAAAATCATCTTTGTGGAAAGCTTCCGG 1305
| ||||| ||| |||| | | || ||||||| || |||||||||||||||||||| |
Sbjct 1309 TGGTGGCTGGACTAAAGACATTGAACGTGAGTCACAACCATCTTTGTGGAAAGCTTCCAG 1368
Query 1306 TGACAAAGTTCCCGGCCAGCGCGTTTGCGGGTAACGACTGTCTTTGTGGCTCTCCACTTT 1365
| ||||||||||||||||| ||||||| |||||| ||||||||||| |||||||| ||||
Sbjct 1369 TAACAAAGTTCCCGGCCAGTGCGTTTGTGGGTAATGACTGTCTTTGCGGCTCTCCTCTTT 1428
Query 1366 CTCCTTGTAAAGCTTA-GCGGCAA 1388
|||||||||||||||| |||||||
Sbjct 1429 CTCCTTGTAAAGCTTAAGCGGCAA 1452
> AT1G33610.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr1:12188910-12190418 FORWARD LENGTH=1509
Length=1509
Score = 464 bits (251), Expect = 9e-130
Identities = 663/854 (78%), Gaps = 60/854 (7%)
Strand=Plus/Plus
Query 560 CAATCTTGGCGGCAACCGCCTCTCTGGCACCATCTCAGATATATTT-AAACCCATGACGA 618
||| || |||| |||||||||||||||||||||| | ||||| ||| || |||||| |
Sbjct 613 CAA-CTCGGCGACAACCGCCTCTCTGGCACCATCCCGGATAT-TTTCGAATCCATGAAGT 670
Query 619 ACCTCCAACATCTTGATCTCTCCCGCAACGGATTCT-CTGGGAAACTTCCTCCATCGTTT 677
||| || ||| ||||||||| |||||| ||||| | ||||||||||||| |||| ||
Sbjct 671 TGCTCAAATTTCTCGATCTCTCCAGCAACGAATTCTAC-GGGAAACTTCCTCTATCGATT 729
Query 678 TCAT-CGCTTGCACCGACCCTCAAATATCTCGATCTGAGCCAGAACAATCTCTC-GGGAA 735
| | | || |||||||| ||| ||| | ||||||||||||||||||| |||
Sbjct 730 GC-TACACTGGCACCGACACTCCTGGCCCTCCAAGTGAGCCAGAACAATCTCTCTGGG-G 787
Query 736 CGATTCCGGACTATTTATCAAGATTCGAGACGCTTTCCACA-TTGGTTCTCTCCAAGAAT 794
|||| || ||||| ||||||||||| | | || || | | || | ||||||||||||
Sbjct 788 CGATCCCAAACTATATATCAAGATTCAACAAGC-TTGAAAAGTTAGATCTCTCCAAGAAC 846
Query 795 CAGTACTCGGGGGTTGTG-C-CAACGAGTTTCGCT-AATTTAACCAGTATTTACTATCTC 851
| || ||||||||||||| | ||| | |||||| | ||| | |||| |||| || ||||
Sbjct 847 CGGTTCTCGGGGGTTGTGCCTCAA-G-GTTTCG-TCAATCTCACCAATATTAACAATCTT 903
Query 852 GATCTCTCCCACAATC-TCTTAACCGGTCCA-TTCCATGCCTTGAAGAGT--A-GC-ATC 905
|||||||| ||||||| || ||||||||| | |||| || |||| | || | | |||
Sbjct 904 GATCTCTCTCACAATCTTC-TAACCGGTCAATTTCC-TGACTTG-ACCGTCAACACTATC 960
Query 906 GGCTATCTTGATCTATCGTACAACCAATTT-AACCTGA-AAACCATTCCGGAATGGGTGA 963
| ||||||||||| || |||||||||||| || || | |||| ||||| |||||||||
Sbjct 961 GAATATCTTGATCTCTCTTACAACCAATTTCAA-CT-AGAAACGATTCCACAATGGGTGA 1018
Query 964 CCTCGTCGACGAGTTTGTACTCACTAAAGTTGGCTAAATGCAGTATCAAGATGAACTTAA 1023
||| || | |||| | | || | ||| | || |||||| | |||||||||| ||| |
Sbjct 1019 CCTTGTTGCCGAGCGTCTTCTTGTTGAAGCTAGCAAAATGCGGGATCAAGATGAGCTT-A 1077
Query 1024 G-CGATTGGAGGCCAGTGAAGACCAAATTGT--T-CAATAACATCGATCTGTCCG-AAAA 1078
| ||||||| ||||| | | ||| |||| | | || |||| ||| ||| || ||||
Sbjct 1078 GATGATTGGAAGCCAGCGGA-ACC--GTTGTACTACCATTACATTGATTTGT-CGAAAAA 1133
Query 1079 CGAGTTCTCAGGGAGTCCA-ACATGGTTCCTAAACAAGACGGAGG-ATCT-ATTGGAGTT 1135
|||| |||||||||||| | | | ||||| | ||| |||| |||| |||| || |||||
Sbjct 1134 CGAGATCTCAGGGAGTCTAGA-AAGGTTCTTGAACGAGAC-GAGGTATCTGCTT-GAGTT 1190
Query 1136 CCAGGCGTCGGGA-AACAAACTCCAATTTGACATGGGGAAGTTGA-GTTTCGCAAAGTCA 1193
| |||| | ||| |||||||| | ||| || |||||||| | | ||||| | | | ||
Sbjct 1191 TCGGGCGGC-GGAGAACAAACTTCGATTCGATATGGGGAACCTAACGTTTC-CGAGGACA 1248
Query 1194 CTTAGAATC-TTGGATCTATCAAGGAACTTGGTATTTGGGAAGGTGCCATG-GACAGTGG 1251
| || || | |||||||| |||||||||||||||||||| |||||||| || || ||||
Sbjct 1249 C-TAAAAACTTTGGATCTGTCAAGGAACTTGGTATTTGGTAAGGTGCC-TGTCACGGTGG 1306
Query 1252 CTAAACTGA-AGAA-ACTAAATTTGAGTCAAAATCATCTTTGTGGA-AAGCTTCCGGTGA 1308
|| || | | || |||||| || |||||||| |||||||||||| || ||||| ||
Sbjct 1307 CTGGTCT-ACA-AAGACTAAACTTAAGTCAAAACCATCTTTGTGGAGAA-CTTCCTACGA 1363
Query 1309 CAAAGTTCCCGGCCAGCGCGTTTGCGGGTAACGACTGTCTTTGTGGCTCTCCACTTTCTC 1368
||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||
Sbjct 1364 CAAAGTTCCCGGCTAGCGCCTTCGCCGGTAACGACTGTCTTTGTGGCTCTCCACTTTCTC 1423
Query 1369 CTTGTAAAGCTTAG 1382
||||||||||||||
Sbjct 1424 CTTGTAAAGCTTAG 1437
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69126150465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5