BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg922468

Length=482
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G33750.1 | Symbols:  | Terpenoid cyclases/Protein prenyltran...  93.5    2e-18


> AT1G33750.1 | Symbols:  | Terpenoid cyclases/Protein prenyltransferases 
superfamily protein | chr1:12233769-12236476 FORWARD 
LENGTH=1940
Length=1940

 Score = 93.5 bits (50),  Expect = 2e-18
 Identities = 77/90 (86%), Gaps = 2/90 (2%)
 Strand=Plus/Plus

Query  194   GTTTGAGAATCATCAGCCGAAGTATAATGGAAACTGTGGAAGATATTGAAAGAGAAATGA  253
             |||| |||||| ||| || ||||||| | |||||  ||||||||||||||||||||||||
Sbjct  1166  GTTTAAGAATCGTCATCCAAAGTATAGTTGAAACAATGGAAGATATTGAAAGAGAAATGA  1225

Query  254   AGCCGCAAAGAATATCCT-GTAGTGTGCAA  282
             |||||| | ||| ||||| | |||||||||
Sbjct  1226  AGCCGCGAGGAAGATCCTCG-AGTGTGCAA  1254



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 22957005179


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5