BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg922482 Length=622 Score E Sequences producing significant alignments: (Bits) Value AT4G22700.1 | Symbols: LBD32 | LOB domain-containing protein 32... 429 1e-119 > AT4G22700.1 | Symbols: LBD32 | LOB domain-containing protein 32 | chr4:11933297-11933886 FORWARD LENGTH=590 Length=590 Score = 429 bits (232), Expect = 1e-119 Identities = 485/603 (80%), Gaps = 33/603 (5%) Strand=Plus/Plus Query 17 AAGAATGGCTTCCAACCGTTGTGCTGTTTGCAAGATCTTGAATGAAACTTGTGCT-CAAG 75 ||||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||| Sbjct 1 AAGAATGGCTTCCAACCGTTGTGCTGTCTGCAAAATTTTGAATGAAACTTGTGCTCCAA- 59 Query 76 GGTGCATCTCGGCACCACATTTTCCATCGAACGATACAAGTTTTGAAGATGTCAGTCGAG 135 |||||| | ||||||||||||||||| |||||| ||||||| ||| | | | || || Sbjct 60 TGTGCATTTATGCACCACATTTTCCATCAAACGATGCAAGTTTCAAAGTTATTATTC-AG 118 Query 136 -TCTTTGGAGCCATGAACGTCCGCAAGATCCTCGTTGATCTT-AACACCCCTGAACAACG 193 | ||||||||| |||| || |||| ||||| | | ||||| || || |||||||| Sbjct 119 ATTTTTGGAGCCGTGAATGTTTGCAATATCCTTGATAATCTTGAA-TTTCCAGAACAACG 177 Query 194 TCAGATTGCTGCCAACTGCTTGCGCTATGAAGCTGAGGCTCGTCGACGTGACCCCATTTC 253 |||||||||||||||| || || |||| |||||||||||| |||| | || ||||| Sbjct 178 AGAGATTGCTGCCAACTGTTTACGTTATGCTGCTGAGGCTCGTATACGTAATCCTATTTC 237 Query 254 CGGTTGCCATGGCATGATCCTACACCACAAGAGTATTCTCAATAATATTGAACAAGAGAT 313 ||||| |||| |||||| ||||| |||||| ||||||||||||| |||||||||| || Sbjct 238 TGGTTGTCATGACATGATTCTACAATACAAGAATATTCTCAATAATGTTGAACAAGATAT 297 Query 314 TGAGTCTACAAAGAATGAGCTT-GAACCCTACGTGGGATC-CGATCGAA-TGCCAAAATT 370 ||| || | |||||||||| ||| |||| |||||| | ||||| || | |||||||| Sbjct 298 TGAATCCGCGGTGAATGAGCTTGGAA-CCTATGTGGGA-CACGATC-AAGTACCAAAATT 354 Query 371 TTTTGATCTTCCTATGCCAGAAGATTTCCTCACT-ACATCAGCCTCTTTAGAtttttttG 429 || ||||||||| |||||||| |||||||||| | ||| ||| ||||||||||| |||| Sbjct 355 TTATGATCTTCCAATGCCAGATGATTTCCTCA-TGACACCAGTCTCTTTAGATTCTTTTA 413 Query 430 TTGAAAAAATAAAGAGTCTAAATGCAGTTCAAAAGAATCAACTTATGCAACTCCCAACAG 489 ||| |||||| |||||| |||| | ||||||||||||||||||||||||||||||||| | Sbjct 414 TTGCAAAAATTAAGAGTTTAAACGAAGTTCAAAAGAATCAACTTATGCAACTCCCAACTG 473 Query 490 CTG---AT---GCACAAATGATAATGGGTAAAATATTTTGGAATGG-GGAAGATCATAAG 542 ||| || |||| |||||||||| || |||||| |||| | ||||||| | || Sbjct 474 CTGCTGATAATGCACCAATGATAATGAATAGCATATTTGGGAA-GATGGAAGAT-A-AA- 529 Query 543 AAGGATGAG-GATGGTCATGGTCCCGAAGCTGATGGCGCATCAACATCTGCTTGTCAGTG 601 || ||| ||||| ||| | | |||||||| ||||||||||||||| || |||| Sbjct 530 AACC-TGAAAGATGGGCATAG-----A-GCTGATGGTGCATCAACATCTGCTGGTAAGTG 582 Query 602 ATA 604 ||| Sbjct 583 ATA 585 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29989785759 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5