BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg922500
Length=1088
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33990.1 | Symbols: ATMES14, MES14 | methyl esterase 14 | ch... 1746 0.0
AT4G09900.1 | Symbols: ATMES12, MES12 | methyl esterase 12 | ch... 955 0.0
> AT1G33990.1 | Symbols: ATMES14, MES14 | methyl esterase 14 |
chr1:12355568-12358031 FORWARD LENGTH=1525
Length=1525
Score = 1746 bits (945), Expect = 0.0
Identities = 1039/1085 (96%), Gaps = 3/1085 (0%)
Strand=Plus/Plus
Query 2 TTCTGGGTTCTTGATTTGGAAAGATGGGTAACAAGATAATCTCAATGATGAAGAAAGATA 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 TTCTGGGTTCTTGATTTGGAAAGATGGGTAACAAGATAATCTCAATGATGAAGAAAGATA 378
Query 62 GCAAAGAT---GGAGGAGGAGGATCTAAGAGCAAAAGAATGAATCGGTCACAAAGGAAAT 118
|||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct 379 GCAAAGATGGAGGAGGAGGAGGATCTAAGAGCAAGAGAATGAATCGGTCTCAGAGGAAAT 438
Query 119 TACTTGCTGATGAAGAGATGTTGCATCGTCGAGCTCTTTCCATGGCGATTCATCAAGCTC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TACTTGCTGATGAAGAGATGTTGCATCGTCGAGCTCTTTCCATGGCGATTCATCAAGCTC 498
Query 179 AGCTTTCTCAGAGATTTGATGGATCTATGTCTAGACGAGTCGGGTCTACTAGTACCAGAA 238
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 499 AGCTTTCTCAGAGATTTGATGGATCTATGTCTAGACGGGTCGGGTCTACTAGTACTAGGA 558
Query 239 AACGAACTCTCTCTGACCCGTTTTCTAATGGCAAGCAGGTACCTGATTTTTCAGAGAGCT 298
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 559 AACGTACTCTCTCTGACCCGTTTTCTAATGGCAAGCAGGTACCTGATTTTTCAGAGAGCT 618
Query 299 TGATAGTGAAGAAATTTGTTCTGGTGCACGGTGAAGGATTTGGGGCATGGTGTTGGTACA 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 TGATAGTGAAGAAATTTGTTCTGGTGCACGGTGAAGGATTTGGGGCATGGTGTTGGTACA 678
Query 359 AGATGGTTGCTTCACTGGAAGAGTCAGGACTGTCTCCTACTACAGTTGACCTCACTGGGT 418
| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 679 AAATGGTTGCTTCATTGGAAGAGTCAGGACTGTCTCCTGTTACAGTTGACCTCACTGGGT 738
Query 419 GTGGATTTAATATGACGGACACAAACAGTGTCTCTACCTTGGAGGAATATTCAAGACCGT 478
|||||||||||||||| |||||||| | |||||||||||||||||||||||||| |||||
Sbjct 739 GTGGATTTAATATGACTGACACAAATACTGTCTCTACCTTGGAGGAATATTCAAAACCGT 798
Query 479 TGATCGAGCTCCTTGAAAATCTCCCTGAAGAAGAGAAGGTTATTCTAGTGGGTCATAGTA 538
||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 799 TGATCGATCTCCTCGAAAATCTCCCCGAAGAAGAGAAGGTTATTCTAGTGGGTCACAGTA 858
Query 539 CTGGAGGTGCTTCAATTTCATATGCGTTAGAGCGGTTTCCAGAGAAAATCTCAAAAGCTA 598
||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct 859 CTGGAGGTGCTTCCATTTCATATGCGTTAGAGAGGTTTCCAGAGAAAATCTCTAAAGCTA 918
Query 599 TATTTGTATGTGCAACCATGGTTTCTGATGGCCAAAGACCCTTTGATGTTTTCTCTGAAG 658
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 919 TATTCGTATGTGCAACAATGGTTTCTGATGGCCAAAGACCTTTTGATGTTTTCTCTGAAG 978
Query 659 AGCTTGGTTCCGCAGAGCGGTTCATGAAAGAGTCGCAGTTCTTGATTTATGGGAATGGAA 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 979 AGCTTGGTTCCGCAGAGCGGTTCATGAAAGAGTCGCAGTTCTTGATTTATGGGAACGGTA 1038
Query 719 AAAACAAGCCTCCTACGGGGTTCATGTTTGAGAAGCCACACATGAAAGGCTTGTATTTCA 778
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1039 AAGACAAGCCTCCTACGGGGTTCATGTTTGAGAAGCCACATATGAAAGGCTTGTATTTCA 1098
Query 779 ATCAATCACCCAACAAGGATATAGCATTGGCAATGATCTCAATGCGACCTGTACCACTCG 838
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1099 ATCAATCACCCAACAAGGATATAGCATTGGCGATGATCTCAATGAGACCTGTACCACTCG 1158
Query 839 GACCAATGATGGAGAAGGTATCTCTGACCGCAGAAAGATACGGGAAAGGGAGAAGATTCT 898
|||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1159 GACCAATGATGGAGAAAGTATCTCTAACCGCAGAAAGATATGGGAAAGGGAGAAGATTCT 1218
Query 899 ATGTCCAGACACTAGATGACCGTGCGCTCTCACCAGATGTTCAAGAGAAGGTAGTGAGAG 958
| |||||||| |||||||||||||| || ||||||||||||||||||||| |||||||||
Sbjct 1219 ACGTCCAGACGCTAGATGACCGTGCACTTTCACCAGATGTTCAAGAGAAGTTAGTGAGAG 1278
Query 959 AGAACAGCCCTGAAGGAGTCTTCAAGATCAAAGGAAGTGATCATTGTCCTTTCTTCTCAA 1018
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1279 AGAACAGCCCTGAAGGAGTCTTCAAGATCAAAGGAAGTGATCATTGCCCTTTCTTCTCAA 1338
Query 1019 AGCCTCAATCTCTCCACAAAATTCTTCTCGAGATTGCACAGATTCCTTAACAAAGATCTG 1078
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct 1339 AGCCTCAATCTCTCCACAAAATCCTTCTGGAGATTGCACAGATTCCTTAACAAAGCTCTG 1398
Query 1079 AGATT 1083
|||||
Sbjct 1399 AGATT 1403
> AT4G09900.1 | Symbols: ATMES12, MES12 | methyl esterase 12 |
chr4:6221664-6224134 REVERSE LENGTH=1363
Length=1363
Score = 955 bits (517), Expect = 0.0
Identities = 896/1075 (83%), Gaps = 42/1075 (4%)
Strand=Plus/Plus
Query 22 AAG-ATGGGTAACAAGA-TAATCT-CAATGATGAAGAAAGA------TAGCA-AAGATGG 71
||| ||||||||| ||| |||||| | |||| ||||||||| || || ||| |||
Sbjct 207 AAGAATGGGTAAC-AGAGTAATCTGC-ATGAAGAAGAAAGATGTTGTTATCAGAAG-TGG 263
Query 72 AGGAGGA-GGATCTAAG-AGCAAAAGAATGAATCGGTCACAAAGGAAATTACTTGCTGAT 129
|||| || || || || ||||| ||| ||||||| ||||| ||||| || |||||||||
Sbjct 264 AGGA-GATGGGTC-CAGAAGCAAGAGAGTGAATCGTTCACAGAGGAAGTTGCTTGCTGAT 321
Query 130 GAAGAG-ATGTTGCATCGTCGAGCTCTT-TCCATGGCGATTCATCAAGCTC-AGCTTTCT 186
|||||| || |||||||| ||||| || || ||||| ||||||||||||| || |||||
Sbjct 322 GAAGAGAAT-TTGCATCGAAGAGCT-TTGTCTATGGCTATTCATCAAGCTCAAG-TTTCT 378
Query 187 CAGAGATTTGATGGATCTATGTCTAGACGAGTCGGGTCTACTAG-TACCAGAAAACGAAC 245
||||||||||||||||| |||||||||||| ||||||||||||| | | |||| | ||||
Sbjct 379 CAGAGATTTGATGGATCCATGTCTAGACGAATCGGGTCTACTAGCT-CTAGAAGAGGAAC 437
Query 246 TCTCTCTGACCCGTTTTCTAATGGCAAGCAGGTACCTGA-TTTTTCAGAGAGCTTGATA- 303
||||||||| | ||||||||| ||||||||| ||||| ||||| |||||||||| |
Sbjct 438 ACTCTCTGACTCATTTTCTAATAACAAGCAGGTTCCTGAGTTTTT-GGAGAGCTTGA-AG 495
Query 304 GTGAAGAAATTTGTTCTGGTGCACGGTGAAGGATTTGGGGCATGGTGTTGGTACAAGA-T 362
|| |||||||| ||| ||||||| |||||||| ||||||||||||||||||||||| | |
Sbjct 496 GTTAAGAAATTCGTTTTGGTGCATGGTGAAGGGTTTGGGGCATGGTGTTGGTACAAAACT 555
Query 363 GGTTGCTTCACTGGAAGAGTCAGGACTGTCTCCTACTACAGTTGACCTCACTGGGTGTGG 422
|||| ||| |||| ||||| |||||||||||| ||| ||||||||| |||| | |||
Sbjct 556 -ATTGCGTCATTGGAGGAGTCTGGACTGTCTCCTGTTACGGTTGACCTCGCTGGATCTGG 614
Query 423 ATTTAATATGACGGACACAAACAGTGTCTCTACCTTGGAGGAATATTCAAGACCGTTGAT 482
|||||||||||| ||| |||| ||||| || ||||| || |||||||||| |||||||||
Sbjct 615 ATTTAATATGACAGACGCAAATAGTGTTTCCACCTTAGAAGAATATTCAAAACCGTTGAT 674
Query 483 CGAGCTCCTTGAAAATCTCCCTGAAGAAGAGAAGGTTATTCTAGTGGGTCATAGTACTGG 542
||||||| || ||||||| |||| ||||| ||||| ||||| || ||||| ||||||||
Sbjct 675 CGAGCTCATTCAAAATCTTCCTGCTGAAGAAAAGGTGATTCTGGTAGGTCACAGTACTGG 734
Query 543 AGGTGCTTCAATTTCATATGCGTTAGAGCGGTTTCCAGAGAAAATCTCAAAAGCTATATT 602
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 AGGGGCATGTGTTTCATATGCGTTAGAGCGGTTTCCAGAGAAAATCTCAAAAGCTATATT 794
Query 603 TGTATGTGCAACCATGGTTTCTGATGGCCAAAGACCCTTTGATGTTTTCTCTGAAGAGCT 662
| |||||||| |||||| ||||||| ||||||||||| ||||| ||| |||| |||||
Sbjct 795 CATTTGTGCAACTATGGTTACTGATGGACAAAGACCCTTCGATGTCTTCGCTGATGAGCT 854
Query 663 TGGTTCCGCAGAGCGGTTCATGAAAGAGTCGCAGTTCTTGATTTATGGGAATGGAAAAAA 722
|||||| ||||| ||||||||||||||||| ||||||||||| ||||| || || || |
Sbjct 855 TGGTTCTGCAGAACGGTTCATGAAAGAGTCACAGTTCTTGATCTATGGAAACGGCAAGGA 914
Query 723 CAAGCCTC-CTACGGGGTTCATGTTTGAGAAGCCACACATGAAAGGCTTGTATTTCAATC 781
||| || | | || ||||||||||| ||||| | |||||||||||||||||| |||||||
Sbjct 915 CAACCC-CGCGACAGGGTTCATGTTCGAGAAACAACACATGAAAGGCTTGTACTTCAATC 973
Query 782 AATCACCCAACAAGGATATAGCATTGGCAATGATCTCAATGCGACCTGTACCACTCGGAC 841
| ||||| || ||||| || |||||| |||||||||| ||||| ||||||||| | || |
Sbjct 974 AGTCACCAAATAAGGACATTGCATTGTCAATGATCTCGATGCGGCCTGTACCATTAGGTC 1033
Query 842 CAATGATGGAGAAGGTATCTCTGACCGCAGAAAGATACGGGAAAGGGAGAAGATTCTATG 901
| |||||||||||| | || || | ||||||||||| |||||||| | ||||||||||
Sbjct 1034 CCATGATGGAGAAGTTGTCACTTAGTGCAGAAAGATATGGGAAAGGTCGGAGATTCTATG 1093
Query 902 TCCAGACACTAGATGACCGTGCGCTCT--CACCAGATGTTCAAGAGAAGGTAGTGAGAGA 959
||||||| || |||||| || ||||| |||| || ||||||||||| | || ||||
Sbjct 1094 TCCAGACGCTCGATGACT-TG-GCTCTTTCACCGGACGTTCAAGAGAAACTGGTTCGAGA 1151
Query 960 GAACAG-CCCTGAAGGAGTCTTCAAGATCAAAGGAAGTGATCATTGTCCTTTCTTCTC-A 1017
||| || ||| |||| ||| || ||||||||||||||||||||||| || |||||||| |
Sbjct 1152 GAATAGTCCC-GAAGCAGTTTTTAAGATCAAAGGAAGTGATCATTGCCCATTCTTCTCTA 1210
Query 1018 AAGCCTCAATCTCTCCACAAAATTCTTCTCGAGATTGCACAGATTCCTTAACAAA 1072
|| ||||| ||||| ||||| || ||||| || || ||||||||||||||| |||
Sbjct 1211 AA-CCTCAGTCTCTTCACAAGATCCTTCTTGAAATAGCACAGATTCCTTAA-AAA 1263
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53312978790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5